Click here to switch to the map view.

The map label for this gene is 116328315

Identifier: 116328315

GI number: 116328315

Start: 1934379

End: 1935563

Strand: Reverse

Name: 116328315

Synonym: LBL_1652

Alternate gene names: NA

Gene position: 1935563-1934379 (Counterclockwise)

Preceding gene: 116328316

Following gene: 116328314

Centisome position: 53.55

GC content: 38.82

Gene sequence:

>1185_bases
ATGAAGAAGTTTGCCGTATCCGAATTAAAGCCCGGGATGAGATTCTCAAAACCGGTATACTTAGATAAGGAAAATTTATT
TATTACTTCCAATACTCCGGTCACAGACAGCGATTTGGACCGACTGAATCGATTTGGAATTCAAGAAGTGATGACGGCTG
GAGAATTACTTCAATTTGATGTCCAATCCGATCTGAACGTTTTAGAAACAAACATTGAAGACATGATCGTCAATACGTTT
GTAGACGATGAGCTGCAACCTCTCAAAGCGGTTTACGATAATCTTAATCGGATTAAAATTTCTTTCGGAAATTTATTCAG
GGAATCCACTCAAGTCATTCAAGACATATTCAAAAAAACTTTGGATGAAAAACCGTTGGAAGTGGCCTCGGTTCGAGAGA
TAGCGGAAAGTTTGACTGACTTTGTACGATCCAATCAAAACATATCATATTTGATTTTAGCAAACAATCCTTCCGGGTAT
TATCTGTACAATCAAATTGCAAATGCAACTTTTTATTCTTTGATTCTTGGAAAACTTTTGGAATATTCCAGACCGAAGAT
GGTCGACCTTGGCATTTCCTGTCTTCTCGCCGATATAGGGATGTGTAAGGTTCCTGCCTCGATTTCGGAAAAGAATGAAC
AACTTTCCGAAGAAGAATTCAAAACAATCATGAAACATACGATTTTAGGATATCAGATTCTTTCTCAAAAGATGAAACTC
AAAAATAACCTCGCAATCGTCGCTCTTCAACACCACGAACGTTATGATGGAAACGGATATCCTCAAAAGTTGGCGAGTAC
TGCGATCGAAGAACAAGCCAGAATCTATGCGATTGCGGATAATTTTTCCGCGCTTGTGACAAATCGTCCTCATCGAAAGA
AAATTCTTCCGCACGAAGCAATCAAGTCTATGATTAGTATGGATGTGGGAAAGTTCGATCTGAAATTGGTTCGAACGCTT
CTCAATCATCTCTCCTTATATCCCGTCGGTTCTTGTATAGAATTATCGGATAAAAGAATCGGGGTCGTTTTAGGACCGAA
TCTCGACAAACCGATCCGGCCTTATATTCGCATTATAAAAGATGAATATGGTACAATGGTACGAAATTTGATCCTTGTGG
ATCTGTTAAAGGAAACGAATCTCTTTATTTCTCGTCCTGTGGATTTACAGGAAATTACGGCGTAA

Upstream 100 bases:

>100_bases
GTTCGGAAATTCCGGAGAATCTTTACAGAGCGGTAGGTGCAATTTTTTCTATGATCTTGGAATTGGATTCAAATTATTCC
GGAAAAAAGGAAATGTTACA

Downstream 100 bases:

>100_bases
AAGAACTTTCCCGGAAAATCCAGTGATGCAGTTGTTTAAGAATCGATTCATAAGAACCCGTCTCAAAACTGGGACAGAAC
CTTGTAGCTTGATCTTTCTA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKKFAVSELKPGMRFSKPVYLDKENLFITSNTPVTDSDLDRLNRFGIQEVMTAGELLQFDVQSDLNVLETNIEDMIVNTF
VDDELQPLKAVYDNLNRIKISFGNLFRESTQVIQDIFKKTLDEKPLEVASVREIAESLTDFVRSNQNISYLILANNPSGY
YLYNQIANATFYSLILGKLLEYSRPKMVDLGISCLLADIGMCKVPASISEKNEQLSEEEFKTIMKHTILGYQILSQKMKL
KNNLAIVALQHHERYDGNGYPQKLASTAIEEQARIYAIADNFSALVTNRPHRKKILPHEAIKSMISMDVGKFDLKLVRTL
LNHLSLYPVGSCIELSDKRIGVVLGPNLDKPIRPYIRIIKDEYGTMVRNLILVDLLKETNLFISRPVDLQEITA

Sequences:

>Translated_394_residues
MKKFAVSELKPGMRFSKPVYLDKENLFITSNTPVTDSDLDRLNRFGIQEVMTAGELLQFDVQSDLNVLETNIEDMIVNTF
VDDELQPLKAVYDNLNRIKISFGNLFRESTQVIQDIFKKTLDEKPLEVASVREIAESLTDFVRSNQNISYLILANNPSGY
YLYNQIANATFYSLILGKLLEYSRPKMVDLGISCLLADIGMCKVPASISEKNEQLSEEEFKTIMKHTILGYQILSQKMKL
KNNLAIVALQHHERYDGNGYPQKLASTAIEEQARIYAIADNFSALVTNRPHRKKILPHEAIKSMISMDVGKFDLKLVRTL
LNHLSLYPVGSCIELSDKRIGVVLGPNLDKPIRPYIRIIKDEYGTMVRNLILVDLLKETNLFISRPVDLQEITA
>Mature_394_residues
MKKFAVSELKPGMRFSKPVYLDKENLFITSNTPVTDSDLDRLNRFGIQEVMTAGELLQFDVQSDLNVLETNIEDMIVNTF
VDDELQPLKAVYDNLNRIKISFGNLFRESTQVIQDIFKKTLDEKPLEVASVREIAESLTDFVRSNQNISYLILANNPSGY
YLYNQIANATFYSLILGKLLEYSRPKMVDLGISCLLADIGMCKVPASISEKNEQLSEEEFKTIMKHTILGYQILSQKMKL
KNNLAIVALQHHERYDGNGYPQKLASTAIEEQARIYAIADNFSALVTNRPHRKKILPHEAIKSMISMDVGKFDLKLVRTL
LNHLSLYPVGSCIELSDKRIGVVLGPNLDKPIRPYIRIIKDEYGTMVRNLILVDLLKETNLFISRPVDLQEITA

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44828; Mature: 44828

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFAVSELKPGMRFSKPVYLDKENLFITSNTPVTDSDLDRLNRFGIQEVMTAGELLQFD
CCCCCCHHCCCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
VQSDLNVLETNIEDMIVNTFVDDELQPLKAVYDNLNRIKISFGNLFRESTQVIQDIFKKT
HHHCHHHHHHCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH
LDEKPLEVASVREIAESLTDFVRSNQNISYLILANNPSGYYLYNQIANATFYSLILGKLL
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHH
EYSRPKMVDLGISCLLADIGMCKVPASISEKNEQLSEEEFKTIMKHTILGYQILSQKMKL
HCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNNLAIVALQHHERYDGNGYPQKLASTAIEEQARIYAIADNFSALVTNRPHRKKILPHEA
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHCCCCHHHHCCCHHH
IKSMISMDVGKFDLKLVRTLLNHLSLYPVGSCIELSDKRIGVVLGPNLDKPIRPYIRIIK
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHH
DEYGTMVRNLILVDLLKETNLFISRPVDLQEITA
HHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHCC
>Mature Secondary Structure
MKKFAVSELKPGMRFSKPVYLDKENLFITSNTPVTDSDLDRLNRFGIQEVMTAGELLQFD
CCCCCCHHCCCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
VQSDLNVLETNIEDMIVNTFVDDELQPLKAVYDNLNRIKISFGNLFRESTQVIQDIFKKT
HHHCHHHHHHCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH
LDEKPLEVASVREIAESLTDFVRSNQNISYLILANNPSGYYLYNQIANATFYSLILGKLL
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHH
EYSRPKMVDLGISCLLADIGMCKVPASISEKNEQLSEEEFKTIMKHTILGYQILSQKMKL
HCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNNLAIVALQHHERYDGNGYPQKLASTAIEEQARIYAIADNFSALVTNRPHRKKILPHEA
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHCCCCHHHHCCCHHH
IKSMISMDVGKFDLKLVRTLLNHLSLYPVGSCIELSDKRIGVVLGPNLDKPIRPYIRIIK
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHH
DEYGTMVRNLILVDLLKETNLFISRPVDLQEITA
HHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]