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The map label for this gene is 116328282

Identifier: 116328282

GI number: 116328282

Start: 1896653

End: 1897231

Strand: Reverse

Name: 116328282

Synonym: LBL_1617

Alternate gene names: NA

Gene position: 1897231-1896653 (Counterclockwise)

Preceding gene: 116328283

Following gene: 116328278

Centisome position: 52.49

GC content: 38.0

Gene sequence:

>579_bases
ATGCCAAAAATAGTGAATCATGAAAAATACAAAACGGAAATTCTATCTAAGTGTGTGGATATTCTCGCGAGAAGAGGATA
TTCTGCGGTTTCAATGAGAGAAATTGCGACCGAGCTAGACGTTTCAACAGGGGCTTTATATCATTACTTTGCGACAAAAG
AGGACATATTCAAAGAATTGGTAAAGTTTCTTCTCAACAAGGATGTCGAGGAAATACAACTCTACTCCAAAGGAAATCTG
GGACAAGCTCTTGAATCCAAAGTTGAATCTCTTTTCCAAATGATTCAAGATCGAGAAACTTACTTCCAAAATCTTCTTTA
TATCATCTGTGACGCTTCTCGGTTGAAAAATCACGAAGAAGAAAAGTCACTGATCGCGGACGCGATGAAAGAATACGTAA
ATATCATTTCGAAACATTTCGGTATTACAAATCCCGGTTTGAGTCGGATTCTAATCAGTGTGATTTTAGGAACCGTAATT
CAAAGAATCGTGGACGAAGACGGGGTTAACCTTTCCGACAGTTCCGAAATCATGAAAGACTTCCTATCGATTCTTCTTTC
CAACTCATTCACATTTTGA

Upstream 100 bases:

>100_bases
AGACCCGACCGTAGAAAGCCGATTTTTCGGATCGACTGCAAATGTGGTCTCAACATCGAAGAATTTGGAGTTACCAAAAA
GAAATGCCCAAGGAAATCTA

Downstream 100 bases:

>100_bases
CGTCTTTTAGTAGATTCTATAACGTTTTTTCACCGCTTTGATCTCTTTGGAGATTCGGTTTTGATTCCAACGTAAATACT
TTGCCAAGGAACGAACGAGT

Product: AcrR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MPKIVNHEKYKTEILSKCVDILARRGYSAVSMREIATELDVSTGALYHYFATKEDIFKELVKFLLNKDVEEIQLYSKGNL
GQALESKVESLFQMIQDRETYFQNLLYIICDASRLKNHEEEKSLIADAMKEYVNIISKHFGITNPGLSRILISVILGTVI
QRIVDEDGVNLSDSSEIMKDFLSILLSNSFTF

Sequences:

>Translated_192_residues
MPKIVNHEKYKTEILSKCVDILARRGYSAVSMREIATELDVSTGALYHYFATKEDIFKELVKFLLNKDVEEIQLYSKGNL
GQALESKVESLFQMIQDRETYFQNLLYIICDASRLKNHEEEKSLIADAMKEYVNIISKHFGITNPGLSRILISVILGTVI
QRIVDEDGVNLSDSSEIMKDFLSILLSNSFTF
>Mature_191_residues
PKIVNHEKYKTEILSKCVDILARRGYSAVSMREIATELDVSTGALYHYFATKEDIFKELVKFLLNKDVEEIQLYSKGNLG
QALESKVESLFQMIQDRETYFQNLLYIICDASRLKNHEEEKSLIADAMKEYVNIISKHFGITNPGLSRILISVILGTVIQ
RIVDEDGVNLSDSSEIMKDFLSILLSNSFTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21941; Mature: 21809

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIVNHEKYKTEILSKCVDILARRGYSAVSMREIATELDVSTGALYHYFATKEDIFKEL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VKFLLNKDVEEIQLYSKGNLGQALESKVESLFQMIQDRETYFQNLLYIICDASRLKNHEE
HHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHH
EKSLIADAMKEYVNIISKHFGITNPGLSRILISVILGTVIQRIVDEDGVNLSDSSEIMKD
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
FLSILLSNSFTF
HHHHHHHCCCCC
>Mature Secondary Structure 
PKIVNHEKYKTEILSKCVDILARRGYSAVSMREIATELDVSTGALYHYFATKEDIFKEL
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VKFLLNKDVEEIQLYSKGNLGQALESKVESLFQMIQDRETYFQNLLYIICDASRLKNHEE
HHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHH
EKSLIADAMKEYVNIISKHFGITNPGLSRILISVILGTVIQRIVDEDGVNLSDSSEIMKD
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
FLSILLSNSFTF
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA