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The map label for this gene is 116328279

Identifier: 116328279

GI number: 116328279

Start: 1888936

End: 1890951

Strand: Direct

Name: 116328279

Synonym: LBL_1612

Alternate gene names: NA

Gene position: 1888936-1890951 (Clockwise)

Preceding gene: 116328276

Following gene: 116328280

Centisome position: 52.26

GC content: 40.67

Gene sequence:

>2016_bases
ATGAATCAAGCAAATAATAAAATTATACAGAGTCGACTTCCCTGTTTCCATTCCGTTTTCCCTTGGTATTTGACTTTCCA
ATTCTTATTTTTTCCGATTTCGATTTTTTCTCAATCCGAATGCGAGTATTCTGAATCGTTAGTCGCTCCGGAATTTTTTC
TTTCTCTTGCGTTTGAACGACAAGCGGAAGCCGCAAAAATTCCTTCTCAAGAAAAATCTAGAAAGATTTACGAAGAATCC
GTGCAATATTACGATCGATACATTCATTGTTCGGTAGCTCTCAAAAGACAAGTTTCTCCCGTGTCCAGAGCGGCCAAGGC
AAACGTTCACTTTTTTCTGGGACAATTCGAAAAAGCTGAAAAGGAAGCGGATGCAGTCATTTTTTCCGATCCCAATTTTA
GAGACGGTTATCTTTTAAAGGTCAGAATTCTCATTCGTTCGGGAGAATTCCAAAAGGCGAGCGACTACCTGGAAGCGAAT
CTAAGTCGTTTTTCGGACGATTCCGATTTTCTTTATCTCTTGGGCTCTCTCAATCAAGAACTTAAAAACTATCCAAGGGC
GATTTTGTATTTAACATCCCTCAGCGATTCGATTCGAAATCGGGAAGGAAATCCGAAATACAGATCGTTTGTGGATAAGT
CTTTGGGTGAGATGTATTTCGCGAACGGCCAATTTAAAAAAGCGCTCTACTTTTTAAACTCTTACATTCATCGAAATCCA
AGCGACATTGCCGCAAGGCTGACTCTCGCTAAAATTTGGAATCAGCTCGGTAAATTCTCCTCCGCGAGAAAGGAACTGAA
CAAAATTCTAAAAACGAAAAAAAACCTTTCCTCGGTGGAACACCTACTGGCGGAAATGTATTTCATCGAGAGCAGGGTGA
CAGCATTTGAATATTTTAATATTCTCAATCAAAATTCCAAAATTCCGAAAGGAAGTATTTTGGAAGGCCTTTATTTCGTT
TTTCTTGGAAAATACTCGGAAGCGAATAGGTTGCTTCTTCCTATAAAAGAAAAATTTCCGGGTCGCCTGGCGGTTCGTTT
GGCGATGTTGGATGTGTATGAAAAAGAGAAAAATCCTTCTTTGTATCTAAGAGAACTTAGAGAAGTTTCGGAACTCGTGT
TCGGAATGCAACAGTTCGAACTTGCGGAAAGAACCGCACAAAGAGCGTTAGCGATTTCGGACAAAACTTCCGAATGGAAC
GATGCAGAAATTTATGATTTTCTCTCTTCCTGTCACGAACAATCCGGTTACGTATATCGTGCAATCTTGATGTCCAGAAA
GGCGGTTGAAAACGCCCGTAAAGAGGAAGAAAAACTCAAATTTCAGTTACATCTTGCGTATCTACTCAGGGCAAATCCTC
CCGGAAAACAAGAGGAAGCCGAGGCTATCATTCGGAACGTTCTTCAAGTTCATCCAGAAATGGCCTATGCAAGATACTTG
CTCGGAATCGTTTTGGCTTCCCAGGAAAAGTATAAAGAAGCATTAGAAGAATTGAATGCAGCAATCGAGACTGATTCCGG
AAACGGCGCCTATTACTTCTACAGGGCTTCCGTTCACGAAAAACTAGAACAACAGGAATTTATGGAGAGGGATTTGAAAA
GGTTCATCGAGATCGATCCTGGAAATCCGATCGCTTATAATTATCTGGGGTATTATCTTTCCGAAAAAGGGATCCGTTTG
AACGAATCCCTTTTACTCGTTCAGAGGGCTGTTGAACTTGCACCGGATAACGAAGCATATCAGGATAGTCTGGGTTGGAT
TTTTTTCAAATTGGGAAATCATGACGAAGCGCTCCTGCATCTACAGCTTGCATATCAGATTCTAAAAGATAAGGGGGAAG
AAGACCCGGTCATTTTAGAACATATCGGTGACGTTTATAAGGAAAAGAGCCAATTAGGAAACGCCGTTGCTTATTGGGAA
AAAAGTCTCAAACTTTTCAAAAAGAAGGAAGACATTTCCAGAATCCAAAAAAAACTACAAACCGGCTCCCCCGAAAATTC
GGAAAAATCGAAATAA

Upstream 100 bases:

>100_bases
AAATTGATTCGACTCCTGAATGGATTGGCTACAAAATGAAATTCTGGACGGATGTTCCTAACAAACGAAACATTCTTTTC
AAATCTGTCCCGTTACCTGA

Downstream 100 bases:

>100_bases
TAATAAATAAGAAAAGAAGATTCGATCGGTCATGAAATTCAAATTATATTCCAATATTCTAATGTTTGTTCTGATTTTCG
GTAAATGTACCACAACCCAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MNQANNKIIQSRLPCFHSVFPWYLTFQFLFFPISIFSQSECEYSESLVAPEFFLSLAFERQAEAAKIPSQEKSRKIYEES
VQYYDRYIHCSVALKRQVSPVSRAAKANVHFFLGQFEKAEKEADAVIFSDPNFRDGYLLKVRILIRSGEFQKASDYLEAN
LSRFSDDSDFLYLLGSLNQELKNYPRAILYLTSLSDSIRNREGNPKYRSFVDKSLGEMYFANGQFKKALYFLNSYIHRNP
SDIAARLTLAKIWNQLGKFSSARKELNKILKTKKNLSSVEHLLAEMYFIESRVTAFEYFNILNQNSKIPKGSILEGLYFV
FLGKYSEANRLLLPIKEKFPGRLAVRLAMLDVYEKEKNPSLYLRELREVSELVFGMQQFELAERTAQRALAISDKTSEWN
DAEIYDFLSSCHEQSGYVYRAILMSRKAVENARKEEEKLKFQLHLAYLLRANPPGKQEEAEAIIRNVLQVHPEMAYARYL
LGIVLASQEKYKEALEELNAAIETDSGNGAYYFYRASVHEKLEQQEFMERDLKRFIEIDPGNPIAYNYLGYYLSEKGIRL
NESLLLVQRAVELAPDNEAYQDSLGWIFFKLGNHDEALLHLQLAYQILKDKGEEDPVILEHIGDVYKEKSQLGNAVAYWE
KSLKLFKKKEDISRIQKKLQTGSPENSEKSK

Sequences:

>Translated_671_residues
MNQANNKIIQSRLPCFHSVFPWYLTFQFLFFPISIFSQSECEYSESLVAPEFFLSLAFERQAEAAKIPSQEKSRKIYEES
VQYYDRYIHCSVALKRQVSPVSRAAKANVHFFLGQFEKAEKEADAVIFSDPNFRDGYLLKVRILIRSGEFQKASDYLEAN
LSRFSDDSDFLYLLGSLNQELKNYPRAILYLTSLSDSIRNREGNPKYRSFVDKSLGEMYFANGQFKKALYFLNSYIHRNP
SDIAARLTLAKIWNQLGKFSSARKELNKILKTKKNLSSVEHLLAEMYFIESRVTAFEYFNILNQNSKIPKGSILEGLYFV
FLGKYSEANRLLLPIKEKFPGRLAVRLAMLDVYEKEKNPSLYLRELREVSELVFGMQQFELAERTAQRALAISDKTSEWN
DAEIYDFLSSCHEQSGYVYRAILMSRKAVENARKEEEKLKFQLHLAYLLRANPPGKQEEAEAIIRNVLQVHPEMAYARYL
LGIVLASQEKYKEALEELNAAIETDSGNGAYYFYRASVHEKLEQQEFMERDLKRFIEIDPGNPIAYNYLGYYLSEKGIRL
NESLLLVQRAVELAPDNEAYQDSLGWIFFKLGNHDEALLHLQLAYQILKDKGEEDPVILEHIGDVYKEKSQLGNAVAYWE
KSLKLFKKKEDISRIQKKLQTGSPENSEKSK
>Mature_671_residues
MNQANNKIIQSRLPCFHSVFPWYLTFQFLFFPISIFSQSECEYSESLVAPEFFLSLAFERQAEAAKIPSQEKSRKIYEES
VQYYDRYIHCSVALKRQVSPVSRAAKANVHFFLGQFEKAEKEADAVIFSDPNFRDGYLLKVRILIRSGEFQKASDYLEAN
LSRFSDDSDFLYLLGSLNQELKNYPRAILYLTSLSDSIRNREGNPKYRSFVDKSLGEMYFANGQFKKALYFLNSYIHRNP
SDIAARLTLAKIWNQLGKFSSARKELNKILKTKKNLSSVEHLLAEMYFIESRVTAFEYFNILNQNSKIPKGSILEGLYFV
FLGKYSEANRLLLPIKEKFPGRLAVRLAMLDVYEKEKNPSLYLRELREVSELVFGMQQFELAERTAQRALAISDKTSEWN
DAEIYDFLSSCHEQSGYVYRAILMSRKAVENARKEEEKLKFQLHLAYLLRANPPGKQEEAEAIIRNVLQVHPEMAYARYL
LGIVLASQEKYKEALEELNAAIETDSGNGAYYFYRASVHEKLEQQEFMERDLKRFIEIDPGNPIAYNYLGYYLSEKGIRL
NESLLLVQRAVELAPDNEAYQDSLGWIFFKLGNHDEALLHLQLAYQILKDKGEEDPVILEHIGDVYKEKSQLGNAVAYWE
KSLKLFKKKEDISRIQKKLQTGSPENSEKSK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 77840; Mature: 77840

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQANNKIIQSRLPCFHSVFPWYLTFQFLFFPISIFSQSECEYSESLVAPEFFLSLAFER
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHH
QAEAAKIPSQEKSRKIYEESVQYYDRYIHCSVALKRQVSPVSRAAKANVHFFLGQFEKAE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH
KEADAVIFSDPNFRDGYLLKVRILIRSGEFQKASDYLEANLSRFSDDSDFLYLLGSLNQE
HHCCEEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LKNYPRAILYLTSLSDSIRNREGNPKYRSFVDKSLGEMYFANGQFKKALYFLNSYIHRNP
HHHCCHHEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCH
SDIAARLTLAKIWNQLGKFSSARKELNKILKTKKNLSSVEHLLAEMYFIESRVTAFEYFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILNQNSKIPKGSILEGLYFVFLGKYSEANRLLLPIKEKFPGRLAVRLAMLDVYEKEKNPS
HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHCCCCHH
LYLRELREVSELVFGMQQFELAERTAQRALAISDKTSEWNDAEIYDFLSSCHEQSGYVYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
AILMSRKAVENARKEEEKLKFQLHLAYLLRANPPGKQEEAEAIIRNVLQVHPEMAYARYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
LGIVLASQEKYKEALEELNAAIETDSGNGAYYFYRASVHEKLEQQEFMERDLKRFIEIDP
HHHHHHCHHHHHHHHHHHHHHEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHEECCC
GNPIAYNYLGYYLSEKGIRLNESLLLVQRAVELAPDNEAYQDSLGWIFFKLGNHDEALLH
CCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCCCHHHHH
LQLAYQILKDKGEEDPVILEHIGDVYKEKSQLGNAVAYWEKSLKLFKKKEDISRIQKKLQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGSPENSEKSK
CCCCCCCCCCC
>Mature Secondary Structure
MNQANNKIIQSRLPCFHSVFPWYLTFQFLFFPISIFSQSECEYSESLVAPEFFLSLAFER
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHH
QAEAAKIPSQEKSRKIYEESVQYYDRYIHCSVALKRQVSPVSRAAKANVHFFLGQFEKAE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH
KEADAVIFSDPNFRDGYLLKVRILIRSGEFQKASDYLEANLSRFSDDSDFLYLLGSLNQE
HHCCEEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LKNYPRAILYLTSLSDSIRNREGNPKYRSFVDKSLGEMYFANGQFKKALYFLNSYIHRNP
HHHCCHHEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCH
SDIAARLTLAKIWNQLGKFSSARKELNKILKTKKNLSSVEHLLAEMYFIESRVTAFEYFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILNQNSKIPKGSILEGLYFVFLGKYSEANRLLLPIKEKFPGRLAVRLAMLDVYEKEKNPS
HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHCCCCHH
LYLRELREVSELVFGMQQFELAERTAQRALAISDKTSEWNDAEIYDFLSSCHEQSGYVYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
AILMSRKAVENARKEEEKLKFQLHLAYLLRANPPGKQEEAEAIIRNVLQVHPEMAYARYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
LGIVLASQEKYKEALEELNAAIETDSGNGAYYFYRASVHEKLEQQEFMERDLKRFIEIDP
HHHHHHCHHHHHHHHHHHHHHEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHEECCC
GNPIAYNYLGYYLSEKGIRLNESLLLVQRAVELAPDNEAYQDSLGWIFFKLGNHDEALLH
CCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCCCHHHHH
LQLAYQILKDKGEEDPVILEHIGDVYKEKSQLGNAVAYWEKSLKLFKKKEDISRIQKKLQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGSPENSEKSK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]