| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328233
Identifier: 116328233
GI number: 116328233
Start: 1820048
End: 1820467
Strand: Direct
Name: 116328233
Synonym: LBL_1557
Alternate gene names: NA
Gene position: 1820048-1820467 (Clockwise)
Preceding gene: 116328232
Following gene: 116328234
Centisome position: 50.35
GC content: 38.33
Gene sequence:
>420_bases TTGTCGGATTCAAATTCAATCGATCTGAATCGTAGTCTTGTCGTCCTTTACGGAGATAAGATTCTTTTGCTCGAACAATT GATTACCAATCAAAAGCGACAAATGGAAATATTCGGGTTCGGAGACGGAGAAGGCGCGGCCAAAATCGAAGACTCAAATG AAAAAATCATCGACCAACTTTGTTCGGTGGATCTTAAGATCGAAAAAATGACGGAAGGTGTTCCTCAAACTTTGGAATTG ATCGAACTTACGGAAATTCTATTTCAAAAAATGGAAGAATCCAGATTTCTACATTCTCAAGTGGAAGAGAGAATGAAAAA AATTCTGAAAGAGTACCAGAAAGAATTAAATCAGGTCCAAGTTCAAATTCAACTCAAGCGCCATTTCAGACGAGACTATT GGAAGACGGGAACTTGTTAG
Upstream 100 bases:
>100_bases CCTAAAATCGGCTTGGGAAGAAATAGAAAAAAAAGAAAAATCGAATGTCGTTCCTACGCCATTCCAAGGTAGTCGCGGTT TATCAATTCAGGGGTAACAA
Downstream 100 bases:
>100_bases AAAGAGCCCTGGAGTTTCTAGGTTTAGAACCGGGGTTTAACGAAAAAGATCTGAAAGAACGTTTTTACTTCCTATCCAAA AAGTATCATCCCGATACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSDSNSIDLNRSLVVLYGDKILLLEQLITNQKRQMEIFGFGDGEGAAKIEDSNEKIIDQLCSVDLKIEKMTEGVPQTLEL IELTEILFQKMEESRFLHSQVEERMKKILKEYQKELNQVQVQIQLKRHFRRDYWKTGTC
Sequences:
>Translated_139_residues MSDSNSIDLNRSLVVLYGDKILLLEQLITNQKRQMEIFGFGDGEGAAKIEDSNEKIIDQLCSVDLKIEKMTEGVPQTLEL IELTEILFQKMEESRFLHSQVEERMKKILKEYQKELNQVQVQIQLKRHFRRDYWKTGTC >Mature_138_residues SDSNSIDLNRSLVVLYGDKILLLEQLITNQKRQMEIFGFGDGEGAAKIEDSNEKIIDQLCSVDLKIEKMTEGVPQTLELI ELTEILFQKMEESRFLHSQVEERMKKILKEYQKELNQVQVQIQLKRHFRRDYWKTGTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16338; Mature: 16207
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSNSIDLNRSLVVLYGDKILLLEQLITNQKRQMEIFGFGDGEGAAKIEDSNEKIIDQL CCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHEEEEEECCCCCCCCEECCCHHHHHHHH CSVDLKIEKMTEGVPQTLELIELTEILFQKMEESRFLHSQVEERMKKILKEYQKELNQVQ HCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQIQLKRHFRRDYWKTGTC HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDSNSIDLNRSLVVLYGDKILLLEQLITNQKRQMEIFGFGDGEGAAKIEDSNEKIIDQL CCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHEEEEEECCCCCCCCEECCCHHHHHHHH CSVDLKIEKMTEGVPQTLELIELTEILFQKMEESRFLHSQVEERMKKILKEYQKELNQVQ HCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQIQLKRHFRRDYWKTGTC HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA