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The map label for this gene is mipB

Identifier: 116328227

GI number: 116328227

Start: 1814601

End: 1815245

Strand: Reverse

Name: mipB

Synonym: LBL_1551

Alternate gene names: 116328227

Gene position: 1815245-1814601 (Counterclockwise)

Preceding gene: 116328228

Following gene: 116328223

Centisome position: 50.22

GC content: 42.33

Gene sequence:

>645_bases
GTGGAATTATATTTAGATACCGCAAATATAGACGAAATTAAAGAAATCGCATCCTACGGACTCGTAGACGGAGTCACTAC
TAATCCTTCGATTATCGCTAAGTCGGGAAGAAATTTTAGAGAAGTCATCAAAGAAATTTGCTCCATAGTTTCCGGTCCTG
TAAGTGCGGAAGTTCTTTCTACAAAGTTCGATGGAATGATGAAAGAGGCCCTAGAGCTTGTGGAGATTGCCGAAAACGTA
GTCATCAAAGTACCTTTGATTCCGGAGGGTCTTAAAACTGTTGTAGAACTCACCAAAAGAAATATTCCTACAAACGTAAC
TCTTTGTTTTTCCTCTTCTCAAGCCCTTCTGGCTGCGAAAGCAGGAGCCACTTATATTTCTCCGTTCATCGGAAGAGTCG
ACGATACAAGCTGGGACGGAATGGAACTGATCTCCGAAATTAGAGAAATCTATGACAACTACGGCTATGATACGAGAATT
CTAGCGGCTTCCATTCGCGGGCCTATGCATCTAAAGGAATCCGCTTTGAGAGGAGCCGACTGTGCGACTATGCCTCATTC
CGCATTTTTGCAACTTTTCAAACATCCATTAACCGATATCGGGCTCGAAAAGTTTTTGGAAGATTCCAAAAAGCTAAAGT
GGTAA

Upstream 100 bases:

>100_bases
TCGAAGAATATTGTCACGTTTGGCTTGAATAAAAATTAAATTGACCTTACCTTAGCTTTCCCCACATGCTCTAAGCATCC
TATTTTTATGGAGCATGTCG

Downstream 100 bases:

>100_bases
TCATTCGGAAAAATTCGCCTCAAATAAAAGCACCCTTCTGATCGATTTTCTTAAAATTTAAAAAGCCTTCCTGCATGTAA
GAGGGCTTTTTTACTGAATC

Product: putative translaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MELYLDTANIDEIKEIASYGLVDGVTTNPSIIAKSGRNFREVIKEICSIVSGPVSAEVLSTKFDGMMKEALELVEIAENV
VIKVPLIPEGLKTVVELTKRNIPTNVTLCFSSSQALLAAKAGATYISPFIGRVDDTSWDGMELISEIREIYDNYGYDTRI
LAASIRGPMHLKESALRGADCATMPHSAFLQLFKHPLTDIGLEKFLEDSKKLKW

Sequences:

>Translated_214_residues
MELYLDTANIDEIKEIASYGLVDGVTTNPSIIAKSGRNFREVIKEICSIVSGPVSAEVLSTKFDGMMKEALELVEIAENV
VIKVPLIPEGLKTVVELTKRNIPTNVTLCFSSSQALLAAKAGATYISPFIGRVDDTSWDGMELISEIREIYDNYGYDTRI
LAASIRGPMHLKESALRGADCATMPHSAFLQLFKHPLTDIGLEKFLEDSKKLKW
>Mature_214_residues
MELYLDTANIDEIKEIASYGLVDGVTTNPSIIAKSGRNFREVIKEICSIVSGPVSAEVLSTKFDGMMKEALELVEIAENV
VIKVPLIPEGLKTVVELTKRNIPTNVTLCFSSSQALLAAKAGATYISPFIGRVDDTSWDGMELISEIREIYDNYGYDTRI
LAASIRGPMHLKESALRGADCATMPHSAFLQLFKHPLTDIGLEKFLEDSKKLKW

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily

Homologues:

Organism=Homo sapiens, GI5803187, Length=237, Percent_Identity=28.2700421940928, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI87081788, Length=210, Percent_Identity=32.3809523809524, Blast_Score=133, Evalue=9e-33,
Organism=Escherichia coli, GI1790382, Length=210, Percent_Identity=35.7142857142857, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788807, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786189, Length=173, Percent_Identity=30.0578034682081, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25153750, Length=173, Percent_Identity=32.3699421965318, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6321480, Length=199, Percent_Identity=33.6683417085427, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI45549185, Length=209, Percent_Identity=29.1866028708134, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TAL_LEPBJ (Q04T59)

Other databases:

- EMBL:   CP000350
- RefSeq:   YP_800669.1
- ProteinModelPortal:   Q04T59
- SMR:   Q04T59
- STRING:   Q04T59
- GeneID:   4410293
- GenomeReviews:   CP000350_GR
- KEGG:   lbj:LBJ_1326
- eggNOG:   COG0176
- HOGENOM:   HBG533000
- OMA:   IHKNIVI
- PhylomeDB:   Q04T59
- ProtClustDB:   PRK01362
- BioCyc:   LBOR355277:LBJ_1326-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00494
- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- InterPro:   IPR018225
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10683
- TIGRFAMs:   TIGR00875

Pfam domain/function: PF00923 Transaldolase

EC number: =2.2.1.2

Molecular weight: Translated: 23600; Mature: 23600

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2

Important sites: ACT_SITE 83-83

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYLDTANIDEIKEIASYGLVDGVTTNPSIIAKSGRNFREVIKEICSIVSGPVSAEVLS
CEEEECCCCHHHHHHHHHHCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHCCCHHHHHHH
TKFDGMMKEALELVEIAENVVIKVPLIPEGLKTVVELTKRNIPTNVTLCFSSSQALLAAK
HHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH
AGATYISPFIGRVDDTSWDGMELISEIREIYDNYGYDTRILAASIRGPMHLKESALRGAD
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCC
CATMPHSAFLQLFKHPLTDIGLEKFLEDSKKLKW
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MELYLDTANIDEIKEIASYGLVDGVTTNPSIIAKSGRNFREVIKEICSIVSGPVSAEVLS
CEEEECCCCHHHHHHHHHHCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHCCCHHHHHHH
TKFDGMMKEALELVEIAENVVIKVPLIPEGLKTVVELTKRNIPTNVTLCFSSSQALLAAK
HHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH
AGATYISPFIGRVDDTSWDGMELISEIREIYDNYGYDTRILAASIRGPMHLKESALRGAD
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCC
CATMPHSAFLQLFKHPLTDIGLEKFLEDSKKLKW
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA