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The map label for this gene is recN [H]

Identifier: 116328203

GI number: 116328203

Start: 1784711

End: 1786417

Strand: Direct

Name: recN [H]

Synonym: LBL_1527

Alternate gene names: 116328203

Gene position: 1784711-1786417 (Clockwise)

Preceding gene: 116328199

Following gene: 116328204

Centisome position: 49.38

GC content: 42.65

Gene sequence:

>1707_bases
ATGCTGAGAACCCTAAATATAAGAGACTTCGCTCTGATTGAAGAGGCTTGCATCGATTTTCAAAAAGGAATGACTGTAAT
TACCGGAGAGACAGGGGCAGGAAAGTCTCTTATTTTGGATGCAATTTCTTCTTTGTTAGGCGGAAAAAGTAGTCCGATGG
AAATTCGAACAGGCGCTCCCCGTTATGTGTTAGAAGGTGTGTTCGATCTTTCTAAAAACTCTGTTGCTCTTGAATGGTTG
AAAGAGAAGGGATTCTCCTTAGATTCGCAGGAACTCACTCTTCACCGAGAATGTAGCCGGGACGGAAAGTCTCGGATTCT
CATCAATCAATCCCTTGCTTCTTCAACTACTCTTCGAGGTTTGGGTGAATTGCTCGCCGAAGTTCACAATCAGAATGACC
AGATTCTTCTTTTGGATCGGGGAGAACAATTGGACATCATCGATCTTTACGCAGGTCTCGTTCCCCTTCGAAACGAAGTG
AAAGAATGCTTTCTTACCTACAGAAGTCTAAAAAAGCGCCTTGAAGAATTGCGTAAGAACGAGGAAGAAAAATCCAAACG
AATCGAGTTTCTTACCTTTCAAATTAGGGAAATCAAAGAGGCTGATCTTAAGGAGGGCGAGGAAGAGGGGCTGATCCAAG
AAGAAAATCTTTTGGCTCATGGAGAACTTCTCGCGGAGAATTATGAAATTCTATCTTCGTATCTTGCGGACAGTGAATCC
GCCATTCTTCCTTCTTTTCCGAGATTTTTGAGCGCGGCAGAAAAGATCAAATCGATTCAACCCGATTTCTCAAAGACCTT
GGATTCTTTACAGGAAATTTATATTCAACTCAAAGAGATCAACTCATCTGTTTTGGATGAAAAGGAAGAGATTTTCTTTT
CTCCGGATAGGCTTCAATTCGTCCAATCTCGTTTGGATCTGATTTCTAAAATGAAAAAAAAATATGGTTCCGATTTGGCT
GCGATTCTGGATTGCAAAAGTAAAGCAGAACAGGAATTGGAAGCGATGGAAGAAAATTCCAAGAATAAGGAATCGATGCA
AGTCGAAATCGAGAAGGTGACTTCTAGACTTGCTTCTCTTTCGATTCAACTTTCCAAAGCGAGAAGGGAGTCTCTCATTC
GTTTCGAATCTTCCCTCAAGTCCGAATTGGAGCAGCTCGGAATGCCAGGGGCGGCAGTTCAAGTCGTACTTCGCTGGGAA
CCGAGTCCGGAAGGAGAAGTATTAGCTTCAGGTAAAAGTTATATTGTAAACGAATCGGGACTGGATCAACTCGAATTTTA
TTTCAGTCCGAATCCGGGTGAAAAACCAAGACCACTTCGTAAGATCGCCTCCGGCGGAGAGGTGTCTCGAGTAATGCTTG
CAATTCGCTCTATTTTGGGTAGGCAGGCCAATTTACGGGTTTTGATCTTTGACGAAATTGATTCCGGTTTAGGCGGAGAA
ATTGCAATGGATGTGGCTCGAAAACTCAGAAATCTGGCGGAAAATCACCAATTGATTTTGATCACACACTTACAACAGAT
CGCATCTGCAGCAAACGATCATCTAAAAGTTACGAAGTCGGTAGAGGGAGGACGTACGTTTTCGAAGACGGAATTTTTGA
GTTTAGAAGAGAGGACTTTGGAACTTGCAAGAATGATCTCAGGTCAAAAAGTGTCAAAAGGTGCTCTAGAACACGCTAAA
GAGCTGTTGAAGAAACAAGCGGTTTAA

Upstream 100 bases:

>100_bases
TGAGTAGTGTAAAAAAATCTGTCCTAAGAAAAAAAATGTTGCAATCATTTGTATAGCAATTATATGAAGGCTATAATCTG
TTAAGTATTTCGAGGTAAAT

Downstream 100 bases:

>100_bases
GATACAGATTTCCCAATTTCGAATCCTACAAAAAGGAGATACGCGAATTAGAAAACTGTTTGGCAGCTACAGTAGAGTTT
TAAACTCTACTCATGGGAGA

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MLRTLNIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKSSPMEIRTGAPRYVLEGVFDLSKNSVALEWL
KEKGFSLDSQELTLHRECSRDGKSRILINQSLASSTTLRGLGELLAEVHNQNDQILLLDRGEQLDIIDLYAGLVPLRNEV
KECFLTYRSLKKRLEELRKNEEEKSKRIEFLTFQIREIKEADLKEGEEEGLIQEENLLAHGELLAENYEILSSYLADSES
AILPSFPRFLSAAEKIKSIQPDFSKTLDSLQEIYIQLKEINSSVLDEKEEIFFSPDRLQFVQSRLDLISKMKKKYGSDLA
AILDCKSKAEQELEAMEENSKNKESMQVEIEKVTSRLASLSIQLSKARRESLIRFESSLKSELEQLGMPGAAVQVVLRWE
PSPEGEVLASGKSYIVNESGLDQLEFYFSPNPGEKPRPLRKIASGGEVSRVMLAIRSILGRQANLRVLIFDEIDSGLGGE
IAMDVARKLRNLAENHQLILITHLQQIASAANDHLKVTKSVEGGRTFSKTEFLSLEERTLELARMISGQKVSKGALEHAK
ELLKKQAV

Sequences:

>Translated_568_residues
MLRTLNIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKSSPMEIRTGAPRYVLEGVFDLSKNSVALEWL
KEKGFSLDSQELTLHRECSRDGKSRILINQSLASSTTLRGLGELLAEVHNQNDQILLLDRGEQLDIIDLYAGLVPLRNEV
KECFLTYRSLKKRLEELRKNEEEKSKRIEFLTFQIREIKEADLKEGEEEGLIQEENLLAHGELLAENYEILSSYLADSES
AILPSFPRFLSAAEKIKSIQPDFSKTLDSLQEIYIQLKEINSSVLDEKEEIFFSPDRLQFVQSRLDLISKMKKKYGSDLA
AILDCKSKAEQELEAMEENSKNKESMQVEIEKVTSRLASLSIQLSKARRESLIRFESSLKSELEQLGMPGAAVQVVLRWE
PSPEGEVLASGKSYIVNESGLDQLEFYFSPNPGEKPRPLRKIASGGEVSRVMLAIRSILGRQANLRVLIFDEIDSGLGGE
IAMDVARKLRNLAENHQLILITHLQQIASAANDHLKVTKSVEGGRTFSKTEFLSLEERTLELARMISGQKVSKGALEHAK
ELLKKQAV
>Mature_568_residues
MLRTLNIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKSSPMEIRTGAPRYVLEGVFDLSKNSVALEWL
KEKGFSLDSQELTLHRECSRDGKSRILINQSLASSTTLRGLGELLAEVHNQNDQILLLDRGEQLDIIDLYAGLVPLRNEV
KECFLTYRSLKKRLEELRKNEEEKSKRIEFLTFQIREIKEADLKEGEEEGLIQEENLLAHGELLAENYEILSSYLADSES
AILPSFPRFLSAAEKIKSIQPDFSKTLDSLQEIYIQLKEINSSVLDEKEEIFFSPDRLQFVQSRLDLISKMKKKYGSDLA
AILDCKSKAEQELEAMEENSKNKESMQVEIEKVTSRLASLSIQLSKARRESLIRFESSLKSELEQLGMPGAAVQVVLRWE
PSPEGEVLASGKSYIVNESGLDQLEFYFSPNPGEKPRPLRKIASGGEVSRVMLAIRSILGRQANLRVLIFDEIDSGLGGE
IAMDVARKLRNLAENHQLILITHLQQIASAANDHLKVTKSVEGGRTFSKTEFLSLEERTLELARMISGQKVSKGALEHAK
ELLKKQAV

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=567, Percent_Identity=31.0405643738977, Blast_Score=266, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 63700; Mature: 63700

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTLNIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKSSPMEIRTGAP
CCEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCCC
RYVLEGVFDLSKNSVALEWLKEKGFSLDSQELTLHRECSRDGKSRILINQSLASSTTLRG
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHH
LGELLAEVHNQNDQILLLDRGEQLDIIDLYAGLVPLRNEVKECFLTYRSLKKRLEELRKN
HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EEEKSKRIEFLTFQIREIKEADLKEGEEEGLIQEENLLAHGELLAENYEILSSYLADSES
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
AILPSFPRFLSAAEKIKSIQPDFSKTLDSLQEIYIQLKEINSSVLDEKEEIFFSPDRLQF
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHH
VQSRLDLISKMKKKYGSDLAAILDCKSKAEQELEAMEENSKNKESMQVEIEKVTSRLASL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SIQLSKARRESLIRFESSLKSELEQLGMPGAAVQVVLRWEPSPEGEVLASGKSYIVNESG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCEEECCCCEEECCCC
LDQLEFYFSPNPGEKPRPLRKIASGGEVSRVMLAIRSILGRQANLRVLIFDEIDSGLGGE
CCCEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCH
IAMDVARKLRNLAENHQLILITHLQQIASAANDHLKVTKSVEGGRTFSKTEFLSLEERTL
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
ELARMISGQKVSKGALEHAKELLKKQAV
HHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRTLNIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKSSPMEIRTGAP
CCEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCCC
RYVLEGVFDLSKNSVALEWLKEKGFSLDSQELTLHRECSRDGKSRILINQSLASSTTLRG
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHH
LGELLAEVHNQNDQILLLDRGEQLDIIDLYAGLVPLRNEVKECFLTYRSLKKRLEELRKN
HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EEEKSKRIEFLTFQIREIKEADLKEGEEEGLIQEENLLAHGELLAENYEILSSYLADSES
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
AILPSFPRFLSAAEKIKSIQPDFSKTLDSLQEIYIQLKEINSSVLDEKEEIFFSPDRLQF
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHH
VQSRLDLISKMKKKYGSDLAAILDCKSKAEQELEAMEENSKNKESMQVEIEKVTSRLASL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SIQLSKARRESLIRFESSLKSELEQLGMPGAAVQVVLRWEPSPEGEVLASGKSYIVNESG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCEEECCCCEEECCCC
LDQLEFYFSPNPGEKPRPLRKIASGGEVSRVMLAIRSILGRQANLRVLIFDEIDSGLGGE
CCCEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCH
IAMDVARKLRNLAENHQLILITHLQQIASAANDHLKVTKSVEGGRTFSKTEFLSLEERTL
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
ELARMISGQKVSKGALEHAKELLKKQAV
HHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]