Click here to switch to the map view.

The map label for this gene is flaB-1 [H]

Identifier: 116328165

GI number: 116328165

Start: 1732029

End: 1732877

Strand: Direct

Name: flaB-1 [H]

Synonym: LBL_1478

Alternate gene names: 116328165

Gene position: 1732029-1732877 (Clockwise)

Preceding gene: 116328156

Following gene: 116328166

Centisome position: 47.92

GC content: 45.58

Gene sequence:

>849_bases
ATGATTATCAACCATAATATCAGTGCCATTTTCGCGCACAGAACGTTGAAATTCAACAGCGAAAGCATGGGAAAGGACAT
CGAAAAATTGTCCTCCGGAATGAGAATCAACCGTGCAGGTGACGACGCTTCTGGTCTTGCAGTGTCCGAGAAAATGAGAA
CTCAAATTTTAGGTCTCAGAAGAGCGGAAATGAACACCGAAGATGGTATGTCTCTGATTCAAACAACGGAAGGGTATCTC
CAGGAAACTCATGAAATTGTACAGAGAATCCGGGTTTTGGCTGTCCAAGCCGCTAACGGTATTTATACCGAGGAAGACAG
ACAACAGATCCAAGTGGAAGTTTCTCAGTTGGTGGACGAGATTGACCGAATCGCTTCCCAAGCGGAATTCAATAAGATGA
AACTCCTTACAGGAGCTTTTGCGAGATTGAATCCGACTGCGAGTATGTGGTTTCACATGGGCGCAAATATGCACCAAAGA
GAAAGAGTTTATATTGAAACGATGAATACTGCGGCGTTAGGTCTCAGAAACCCGACCGTTTTGACGTTTATTTCTCTTTC
TACTGCCGGTAAGGCAAATTCGGTAATCGGATTAACGGATGATGCACTCCGTACCATCTCAAAACAGAGAGCGGATTTGG
GTGCATATTACAACCGTCTGGAACACGCGGCGAAAGGTCTCATGAACGCTTATGAAAACATCCAAGCTGCAGAATCCAGA
ATCCGCGATACCGATATGGCCGAGCAAATGACCAGTTTTACGCGTTACCAGATCTTAACACAAGCTGCTACCGCAATGCT
GGCTCAGGCCAATATGAAACCGCAGACGGTTCTCCAGTTGCTGAAGTAA

Upstream 100 bases:

>100_bases
TTTTGCCGGATCGTCGATGAAATCTCTGAAAAGGTCAAGGAAGACCTTTGAAAAATCATTATCCCCTGTTTTCAGGGAAT
CGGATTCAAGGAGGAACCGA

Downstream 100 bases:

>100_bases
CCGTTACTTTTGACTGAAAGTTTTCATTTCAGTCGGAAGAGTTAAGAAAAAGCCGGAAAAGACGATATCTAAAATGGATT
TATAATTCCCGTTATAAATC

Product: endoflagellar filament core protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIINHNISAIFAHRTLKFNSESMGKDIEKLSSGMRINRAGDDASGLAVSEKMRTQILGLRRAEMNTEDGMSLIQTTEGYL
QETHEIVQRIRVLAVQAANGIYTEEDRQQIQVEVSQLVDEIDRIASQAEFNKMKLLTGAFARLNPTASMWFHMGANMHQR
ERVYIETMNTAALGLRNPTVLTFISLSTAGKANSVIGLTDDALRTISKQRADLGAYYNRLEHAAKGLMNAYENIQAAESR
IRDTDMAEQMTSFTRYQILTQAATAMLAQANMKPQTVLQLLK

Sequences:

>Translated_282_residues
MIINHNISAIFAHRTLKFNSESMGKDIEKLSSGMRINRAGDDASGLAVSEKMRTQILGLRRAEMNTEDGMSLIQTTEGYL
QETHEIVQRIRVLAVQAANGIYTEEDRQQIQVEVSQLVDEIDRIASQAEFNKMKLLTGAFARLNPTASMWFHMGANMHQR
ERVYIETMNTAALGLRNPTVLTFISLSTAGKANSVIGLTDDALRTISKQRADLGAYYNRLEHAAKGLMNAYENIQAAESR
IRDTDMAEQMTSFTRYQILTQAATAMLAQANMKPQTVLQLLK
>Mature_282_residues
MIINHNISAIFAHRTLKFNSESMGKDIEKLSSGMRINRAGDDASGLAVSEKMRTQILGLRRAEMNTEDGMSLIQTTEGYL
QETHEIVQRIRVLAVQAANGIYTEEDRQQIQVEVSQLVDEIDRIASQAEFNKMKLLTGAFARLNPTASMWFHMGANMHQR
ERVYIETMNTAALGLRNPTVLTFISLSTAGKANSVIGLTDDALRTISKQRADLGAYYNRLEHAAKGLMNAYENIQAAESR
IRDTDMAEQMTSFTRYQILTQAATAMLAQANMKPQTVLQLLK

Specific function: Component of the core of the flagella (Probable) [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=195, Percent_Identity=35.8974358974359, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 31534; Mature: 31534

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINHNISAIFAHRTLKFNSESMGKDIEKLSSGMRINRAGDDASGLAVSEKMRTQILGLR
CEECCCHHEEEEHHHEEECCHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHH
RAEMNTEDGMSLIQTTEGYLQETHEIVQRIRVLAVQAANGIYTEEDRQQIQVEVSQLVDE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IDRIASQAEFNKMKLLTGAFARLNPTASMWFHMGANMHQRERVYIETMNTAALGLRNPTV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHCCCCCCE
LTFISLSTAGKANSVIGLTDDALRTISKQRADLGAYYNRLEHAAKGLMNAYENIQAAESR
EEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDTDMAEQMTSFTRYQILTQAATAMLAQANMKPQTVLQLLK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
>Mature Secondary Structure
MIINHNISAIFAHRTLKFNSESMGKDIEKLSSGMRINRAGDDASGLAVSEKMRTQILGLR
CEECCCHHEEEEHHHEEECCHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHH
RAEMNTEDGMSLIQTTEGYLQETHEIVQRIRVLAVQAANGIYTEEDRQQIQVEVSQLVDE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IDRIASQAEFNKMKLLTGAFARLNPTASMWFHMGANMHQRERVYIETMNTAALGLRNPTV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHCCCCCCE
LTFISLSTAGKANSVIGLTDDALRTISKQRADLGAYYNRLEHAAKGLMNAYENIQAAESR
EEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDTDMAEQMTSFTRYQILTQAATAMLAQANMKPQTVLQLLK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA