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The map label for this gene is cheD1 [H]

Identifier: 116328158

GI number: 116328158

Start: 1718309

End: 1718749

Strand: Reverse

Name: cheD1 [H]

Synonym: LBL_1468

Alternate gene names: 116328158

Gene position: 1718749-1718309 (Counterclockwise)

Preceding gene: 116328159

Following gene: 116328157

Centisome position: 47.55

GC content: 45.35

Gene sequence:

>441_bases
ATGACGGAACCAGATACGGTAAGGGATATATTTTTACAGCCCGGAGGCTTTTGTTGGGGAAGAAGGGATCTGAGAATTAG
AACCTTACTCGGTTCTTGCGTATCGATTTGTTTTTGGAATCCAGCTCTTCTCTACGGGGGAATGGCACACGTTATGCTCC
CATATAGGCCGGGTTATAGCGCCACTTTAAACGCAAAATACGCCGACGAAGCCATTCGATTGTTTTTCGAAAAGATAGAA
CAGGCGGAAGGAAGAGCCGGCCAATATCAGATAAAACTTTTCGGCGGAGCCTCCATGTTCTCTACGGAAGAGGAAAAACT
CCTCGAAATCAAATCCGTTCGGGATATAGGAATGAAAAATATTCGTTCCATTAAGGAACTCTTAAGTAAAAATCGACTCC
CGATCGCTTCCGAAGACTTGGGGGGGGGGATTTTCTCATAG

Upstream 100 bases:

>100_bases
AAAGCGGATTTATCATCATTTTGAACACGGAAAAAATTCTGAACTTAGAAGAACTAACGTCCTTAGAAGAAAATCAATCA
GAGATACTTGCAGAAAACGT

Downstream 100 bases:

>100_bases
AAGAATTTTCTTTTCCCTTTGGGACGGAGAAATCTACGTGGAAAGACCGGAATTTTCATGATTCGAGTTTTTATCATCGA
CGATTCCGCGGTCGTCCGCC

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTEPDTVRDIFLQPGGFCWGRRDLRIRTLLGSCVSICFWNPALLYGGMAHVMLPYRPGYSATLNAKYADEAIRLFFEKIE
QAEGRAGQYQIKLFGGASMFSTEEEKLLEIKSVRDIGMKNIRSIKELLSKNRLPIASEDLGGGIFS

Sequences:

>Translated_146_residues
MTEPDTVRDIFLQPGGFCWGRRDLRIRTLLGSCVSICFWNPALLYGGMAHVMLPYRPGYSATLNAKYADEAIRLFFEKIE
QAEGRAGQYQIKLFGGASMFSTEEEKLLEIKSVRDIGMKNIRSIKELLSKNRLPIASEDLGGGIFS
>Mature_145_residues
TEPDTVRDIFLQPGGFCWGRRDLRIRTLLGSCVSICFWNPALLYGGMAHVMLPYRPGYSATLNAKYADEAIRLFFEKIEQ
AEGRAGQYQIKLFGGASMFSTEEEKLLEIKSVRDIGMKNIRSIKELLSKNRLPIASEDLGGGIFS

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 16400; Mature: 16269

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPDTVRDIFLQPGGFCWGRRDLRIRTLLGSCVSICFWNPALLYGGMAHVMLPYRPGYS
CCCCCCHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHCCHHHEEECCCCCCC
ATLNAKYADEAIRLFFEKIEQAEGRAGQYQIKLFGGASMFSTEEEKLLEIKSVRDIGMKN
EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCHHH
IRSIKELLSKNRLPIASEDLGGGIFS
HHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEPDTVRDIFLQPGGFCWGRRDLRIRTLLGSCVSICFWNPALLYGGMAHVMLPYRPGYS
CCCCCHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHCCHHHEEECCCCCCC
ATLNAKYADEAIRLFFEKIEQAEGRAGQYQIKLFGGASMFSTEEEKLLEIKSVRDIGMKN
EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCHHH
IRSIKELLSKNRLPIASEDLGGGIFS
HHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA