| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is fyuA [H]
Identifier: 116328146
GI number: 116328146
Start: 1685361
End: 1687763
Strand: Reverse
Name: fyuA [H]
Synonym: LBL_1447
Alternate gene names: 116328146
Gene position: 1687763-1685361 (Counterclockwise)
Preceding gene: 116328151
Following gene: 116328145
Centisome position: 46.69
GC content: 36.79
Gene sequence:
>2403_bases ATGAGATATGAGCTTTTTGTTTCGCCCTGTTCCATAAGGAATAGAGTTGGATTTCTTTTTTCATCACTGAAACATAAAAT TCAAAGTGGAATTCTTTATACATTCTTCACAAACTTCAAAATCTTTTCCTGCCTTTGCAAATTCCCTATTAGAACTTTAT TCTTAATAACAACATCGATCCTCTATGCACAAGAATCTTCACGTTCCACTCCTGCCGAAACAAACAAGGAAACTTCGAAC AAAAGAAGTGAAATTACCGTTCAAGGCAAAAAAGATCCAAGAGACTATGAAATATTCAAAACTCCAAGTAGTATTTCCAG ATTGAATGAACAGGATATTTTAGATACCGGTATCTCCAGAGCAAACGATATAGACAAGCAGGTTCCAAACTTTGCAATTA TAGATTCCGGCGCCCGTAATTTCACATATTATAATATTCGAGGAATGAGAAGCACGTTATTCAGCGATCCTTCCGTCGGA ATGATTGTGGACGGAGTTCCTCTTGCAGATAATGTCGCATTAAATACTGAACTGTTTGCTTTGGAAAGCATCGAAGTATA TAGAGGTTCCCAGGCCACTGTCTTTGGAAAAAACTTTCAAGGCGGTGTAATTGAAATTAACACTAAAAAACCGAATAACA TGCCTCAAGGAAAGGTTACGGCCGATTTGGGAAACTATAAAAAGAAGGAATATTCTTTTTTTTATAATACACCTCTCGTC AAAAACAAATTTTACATAGGCATTTCCGGAAAATCGACCGAAAGAAGCGGATATTTAAATAATATAACTGGATTCAATTA TCCGAATAATCTCACTTCAGACATACCCATCGAAATTCGTAAAACTCATCCCGATGGAAGAAGAGGAAAGTCCGGAAGAC TCAGATTGTATTGGACGCCTACGGAAAGTCTTGAAATTGATCTACAAGCAAACGCCGAAAGTTTCGACGATGGCTCTTTG AATATAGTCAATTACCTCGCTTCTAAATCAGAAAGAAGAAAAAGTTTAATAAAAGGATGTGCTGTAAGCCCTGAGAGTTG CGAGAAAAATTTTCGAACTTACCTCAATCGTACAAAATCGGCTCGAAAAGTATATTGGGACTACGAAGGAGTTTCAAACA CAACCGGAAAAACGTATTCCAGTAATATCAACTATAAATTACCTAAAGCTATTTTTAAAACAACATCTAGCGTTAGGAAA ATGGAAATTGATCCTCTAATTGTAGACGGAGATTTTACTATAAGCGCATTTTCTAAATCTGAATATATTGAACATTCTAC TACAAGAACTCATGAGACAAGTCTCGAATCTAAAAATCAAAGAGAACCGTTCCAATTTAAGATCGGAACATTATTGTATC ATAAAATATCCGACAAGGAATTTACTCAAGAACATTTGACACAAACATACACGTATAGCGTTCTTAAAGGGTTAAACGCT CCGGCAAGAGAAACACACCATTCAAAAATTGAAGATAAATCCTTTAGTTTCTTCACTCACAATAGTTACACGTTTTTGGA AAAATTTACAATTACATTAGGGGCCAGAATCGAAACTCAGAAAATCGGTATAGGCCATAGCCGAGACGCAAAGGGGGCTC TATTAGATAATCCTTATGGAGATATGCGGCTTTTGTCTCCACATTATGTTCGAAACAATTCCTATCGTTACAATGTTTCT AGATTCATTTTCGATTACAAGCCTATCGAATCATTAATGATTTTTACGGGCATAAGTCGCGGCTATAAAAACGCTGGATA TAGTACAGTGGTGAATCAACCGTCCTTAGCGGCTTTTAAGCCGGAAATAAACGATACTATCGAAGTAGGAATCAAATCGA AATACTTCAAAGACTTCCTCGGAATCAACCTCACCTATTTTTATACGGAGGCGACTGATTTTCACGTGATCAGAGCTATT TCTATCGCCGAAGCCGTAAATTTGAATGCGGAGAAAGTTACAATTCGAGGTGCGGAAATCGAATCTTATATGAAGCCGTG GAAATATTTAAGACTCGGTTTTTCTGCCGGCTATACAGAAGGAAGATTCAACAAATTTTACGATCGAGTTCTAGATACAA ACTTCGACGGAAAGCATGTGCATTTTATACCACAATACGACGTCGTAAGTTATCTGCAATATCGTTCTTTATTTGGCCTG TTTTTCAGATGTGAATTTCAGGTCGTAGGGAAAATGTATTTTGCTGCGGACAATACGATCTACAGCGCCCCTTATACCGT AGCTAATTTGAAAATTGGATATGAAGAGGAACGTCTATCCGCTTACATATATTGCAATAACTTGAATAACGAATATTACT TTACTTCCTATATAGACGGAACCTTCCAAGCCGTTCCCGGAACTCCAAGGACCTATGGATTTATTGTAAATTACAAAATA TAA
Upstream 100 bases:
>100_bases TTCAAAATCCCCACTCAGTCTAACTTTTTTCATAATTGATTTTGAGTCCTAAAATCAATTACATCTTTACAAAATGCAGG GATTATTTCTAATGTGCCCT
Downstream 100 bases:
>100_bases GGATCAGACATTAAGGAGACATGGATTCAATGAAGAAAATAATAAAAGTTATATTAATCGCCCTGGCGATCTTCAACTTA ACTTTTTGTAAAAATGAAGA
Product: TonB dependent protein
Products: NA
Alternate protein names: IPR65; IRPC [H]
Number of amino acids: Translated: 800; Mature: 800
Protein sequence:
>800_residues MRYELFVSPCSIRNRVGFLFSSLKHKIQSGILYTFFTNFKIFSCLCKFPIRTLFLITTSILYAQESSRSTPAETNKETSN KRSEITVQGKKDPRDYEIFKTPSSISRLNEQDILDTGISRANDIDKQVPNFAIIDSGARNFTYYNIRGMRSTLFSDPSVG MIVDGVPLADNVALNTELFALESIEVYRGSQATVFGKNFQGGVIEINTKKPNNMPQGKVTADLGNYKKKEYSFFYNTPLV KNKFYIGISGKSTERSGYLNNITGFNYPNNLTSDIPIEIRKTHPDGRRGKSGRLRLYWTPTESLEIDLQANAESFDDGSL NIVNYLASKSERRKSLIKGCAVSPESCEKNFRTYLNRTKSARKVYWDYEGVSNTTGKTYSSNINYKLPKAIFKTTSSVRK MEIDPLIVDGDFTISAFSKSEYIEHSTTRTHETSLESKNQREPFQFKIGTLLYHKISDKEFTQEHLTQTYTYSVLKGLNA PARETHHSKIEDKSFSFFTHNSYTFLEKFTITLGARIETQKIGIGHSRDAKGALLDNPYGDMRLLSPHYVRNNSYRYNVS RFIFDYKPIESLMIFTGISRGYKNAGYSTVVNQPSLAAFKPEINDTIEVGIKSKYFKDFLGINLTYFYTEATDFHVIRAI SIAEAVNLNAEKVTIRGAEIESYMKPWKYLRLGFSAGYTEGRFNKFYDRVLDTNFDGKHVHFIPQYDVVSYLQYRSLFGL FFRCEFQVVGKMYFAADNTIYSAPYTVANLKIGYEEERLSAYIYCNNLNNEYYFTSYIDGTFQAVPGTPRTYGFIVNYKI
Sequences:
>Translated_800_residues MRYELFVSPCSIRNRVGFLFSSLKHKIQSGILYTFFTNFKIFSCLCKFPIRTLFLITTSILYAQESSRSTPAETNKETSN KRSEITVQGKKDPRDYEIFKTPSSISRLNEQDILDTGISRANDIDKQVPNFAIIDSGARNFTYYNIRGMRSTLFSDPSVG MIVDGVPLADNVALNTELFALESIEVYRGSQATVFGKNFQGGVIEINTKKPNNMPQGKVTADLGNYKKKEYSFFYNTPLV KNKFYIGISGKSTERSGYLNNITGFNYPNNLTSDIPIEIRKTHPDGRRGKSGRLRLYWTPTESLEIDLQANAESFDDGSL NIVNYLASKSERRKSLIKGCAVSPESCEKNFRTYLNRTKSARKVYWDYEGVSNTTGKTYSSNINYKLPKAIFKTTSSVRK MEIDPLIVDGDFTISAFSKSEYIEHSTTRTHETSLESKNQREPFQFKIGTLLYHKISDKEFTQEHLTQTYTYSVLKGLNA PARETHHSKIEDKSFSFFTHNSYTFLEKFTITLGARIETQKIGIGHSRDAKGALLDNPYGDMRLLSPHYVRNNSYRYNVS RFIFDYKPIESLMIFTGISRGYKNAGYSTVVNQPSLAAFKPEINDTIEVGIKSKYFKDFLGINLTYFYTEATDFHVIRAI SIAEAVNLNAEKVTIRGAEIESYMKPWKYLRLGFSAGYTEGRFNKFYDRVLDTNFDGKHVHFIPQYDVVSYLQYRSLFGL FFRCEFQVVGKMYFAADNTIYSAPYTVANLKIGYEEERLSAYIYCNNLNNEYYFTSYIDGTFQAVPGTPRTYGFIVNYKI >Mature_800_residues MRYELFVSPCSIRNRVGFLFSSLKHKIQSGILYTFFTNFKIFSCLCKFPIRTLFLITTSILYAQESSRSTPAETNKETSN KRSEITVQGKKDPRDYEIFKTPSSISRLNEQDILDTGISRANDIDKQVPNFAIIDSGARNFTYYNIRGMRSTLFSDPSVG MIVDGVPLADNVALNTELFALESIEVYRGSQATVFGKNFQGGVIEINTKKPNNMPQGKVTADLGNYKKKEYSFFYNTPLV KNKFYIGISGKSTERSGYLNNITGFNYPNNLTSDIPIEIRKTHPDGRRGKSGRLRLYWTPTESLEIDLQANAESFDDGSL NIVNYLASKSERRKSLIKGCAVSPESCEKNFRTYLNRTKSARKVYWDYEGVSNTTGKTYSSNINYKLPKAIFKTTSSVRK MEIDPLIVDGDFTISAFSKSEYIEHSTTRTHETSLESKNQREPFQFKIGTLLYHKISDKEFTQEHLTQTYTYSVLKGLNA PARETHHSKIEDKSFSFFTHNSYTFLEKFTITLGARIETQKIGIGHSRDAKGALLDNPYGDMRLLSPHYVRNNSYRYNVS RFIFDYKPIESLMIFTGISRGYKNAGYSTVVNQPSLAAFKPEINDTIEVGIKSKYFKDFLGINLTYFYTEATDFHVIRAI SIAEAVNLNAEKVTIRGAEIESYMKPWKYLRLGFSAGYTEGRFNKFYDRVLDTNFDGKHVHFIPQYDVVSYLQYRSLFGL FFRCEFQVVGKMYFAADNTIYSAPYTVANLKIGYEEERLSAYIYCNNLNNEYYFTSYIDGTFQAVPGTPRTYGFIVNYKI
Specific function: Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 91650; Mature: 91650
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYELFVSPCSIRNRVGFLFSSLKHKIQSGILYTFFTNFKIFSCLCKFPIRTLFLITTSI CCEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH LYAQESSRSTPAETNKETSNKRSEITVQGKKDPRDYEIFKTPSSISRLNEQDILDTGISR HEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCHHHHHCCHHHHHHHHCHH ANDIDKQVPNFAIIDSGARNFTYYNIRGMRSTLFSDPSVGMIVDGVPLADNVALNTELFA HHHHHHHCCCEEEEECCCCCEEEEEEECHHHHHCCCCCCCEEECCCCCCCCEEECEEEEE LESIEVYRGSQATVFGKNFQGGVIEINTKKPNNMPQGKVTADLGNYKKKEYSFFYNTPLV EEEEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEECCCCC KNKFYIGISGKSTERSGYLNNITGFNYPNNLTSDIPIEIRKTHPDGRRGKSGRLRLYWTP CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECC TESLEIDLQANAESFDDGSLNIVNYLASKSERRKSLIKGCAVSPESCEKNFRTYLNRTKS CCCEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ARKVYWDYEGVSNTTGKTYSSNINYKLPKAIFKTTSSVRKMEIDPLIVDGDFTISAFSKS CEEEEEEECCCCCCCCCEEECCCCEECHHHHHHHHHHHHEEECCEEEECCCEEEEECCCC EYIEHSTTRTHETSLESKNQREPFQFKIGTLLYHKISDKEFTQEHLTQTYTYSVLKGLNA HHHHCCCCCCHHHHCCCCCCCCCEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC PARETHHSKIEDKSFSFFTHNSYTFLEKFTITLGARIETQKIGIGHSRDAKGALLDNPYG CHHHHHHCCCCCCCEEEEECCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCC DMRLLSPHYVRNNSYRYNVSRFIFDYKPIESLMIFTGISRGYKNAGYSTVVNQPSLAAFK CEEECCCCEEECCCEEEEHEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEC PEINDTIEVGIKSKYFKDFLGINLTYFYTEATDFHVIRAISIAEAVNLNAEKVTIRGAEI CCCCCEEEECCCHHHHHHHHCCEEEEEEECCCCEEEEEHHHHHHHHCCCCEEEEEECCHH ESYMKPWKYLRLGFSAGYTEGRFNKFYDRVLDTNFDGKHVHFIPQYDVVSYLQYRSLFGL HHHHCCHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHH FFRCEFQVVGKMYFAADNTIYSAPYTVANLKIGYEEERLSAYIYCNNLNNEYYFTSYIDG HHEEEEEEEEEEEEEECCEEEECCEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEECC TFQAVPGTPRTYGFIVNYKI EEEECCCCCCEEEEEEEEEC >Mature Secondary Structure MRYELFVSPCSIRNRVGFLFSSLKHKIQSGILYTFFTNFKIFSCLCKFPIRTLFLITTSI CCEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH LYAQESSRSTPAETNKETSNKRSEITVQGKKDPRDYEIFKTPSSISRLNEQDILDTGISR HEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCHHHHHCCHHHHHHHHCHH ANDIDKQVPNFAIIDSGARNFTYYNIRGMRSTLFSDPSVGMIVDGVPLADNVALNTELFA HHHHHHHCCCEEEEECCCCCEEEEEEECHHHHHCCCCCCCEEECCCCCCCCEEECEEEEE LESIEVYRGSQATVFGKNFQGGVIEINTKKPNNMPQGKVTADLGNYKKKEYSFFYNTPLV EEEEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEECCCCC KNKFYIGISGKSTERSGYLNNITGFNYPNNLTSDIPIEIRKTHPDGRRGKSGRLRLYWTP CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECC TESLEIDLQANAESFDDGSLNIVNYLASKSERRKSLIKGCAVSPESCEKNFRTYLNRTKS CCCEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ARKVYWDYEGVSNTTGKTYSSNINYKLPKAIFKTTSSVRKMEIDPLIVDGDFTISAFSKS CEEEEEEECCCCCCCCCEEECCCCEECHHHHHHHHHHHHEEECCEEEECCCEEEEECCCC EYIEHSTTRTHETSLESKNQREPFQFKIGTLLYHKISDKEFTQEHLTQTYTYSVLKGLNA HHHHCCCCCCHHHHCCCCCCCCCEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC PARETHHSKIEDKSFSFFTHNSYTFLEKFTITLGARIETQKIGIGHSRDAKGALLDNPYG CHHHHHHCCCCCCCEEEEECCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCC DMRLLSPHYVRNNSYRYNVSRFIFDYKPIESLMIFTGISRGYKNAGYSTVVNQPSLAAFK CEEECCCCEEECCCEEEEHEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEC PEINDTIEVGIKSKYFKDFLGINLTYFYTEATDFHVIRAISIAEAVNLNAEKVTIRGAEI CCCCCEEEECCCHHHHHHHHCCEEEEEEECCCCEEEEEHHHHHHHHCCCCEEEEEECCHH ESYMKPWKYLRLGFSAGYTEGRFNKFYDRVLDTNFDGKHVHFIPQYDVVSYLQYRSLFGL HHHHCCHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHH FFRCEFQVVGKMYFAADNTIYSAPYTVANLKIGYEEERLSAYIYCNNLNNEYYFTSYIDG HHEEEEEEEEEEEEEECCEEEECCEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEECC TFQAVPGTPRTYGFIVNYKI EEEECCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA