Click here to switch to the map view.

The map label for this gene is 116328109

Identifier: 116328109

GI number: 116328109

Start: 1640646

End: 1641293

Strand: Reverse

Name: 116328109

Synonym: LBL_1407

Alternate gene names: NA

Gene position: 1641293-1640646 (Counterclockwise)

Preceding gene: 116328110

Following gene: 116328107

Centisome position: 45.41

GC content: 39.81

Gene sequence:

>648_bases
TTGTTTTTTGTCCTCGGTCTTATCTACACAGTCGGTTTAGACGTTTTTTTGATCCTCATGGGTTTGACCGCGTTTACCGG
TCTGACCTTTCTATTTTTCAAGGAAGTCATATATCCTGCAATAAAAACAGGAAGCGCTGGAGTCGGCACTCCTCCCGAAG
AAGGAGATAGATTCTTACTCGTAGTTTCCGAAAGTCAGAGAAACGTTCGATTTAGCGTTGGCCAAACTTCCGGAAACATT
CGAACCTACTGCAATGCAATCGCCGACAACCATCTGGTATTTAATCTTAAAAAAGCGAAAGACTCGGAAGATTATGAAAT
TCAAATATTACGGAATTCTTTCGTATTATTCAAACCTCCGGGAATGCCCACGTTCTCCAAAATGGAATCCGCCGAAAAAC
TGGATAGCTACGAAGTGATCGGTAAAAATGCGGACTTTCGAATTTCAGACAAAGTGGTCAAAGAAAGAATGATTCAATAT
TTCGAAATCAGCCTTTCCTCTGAATTTTTTATCAATAATTTCGGAAAAGAAAGAATGCGATTCATTTTCACGATCACAAA
AATACATCCCGGTCTCAACCGAAAAGTCCCGATCAAAAAGGGATTATTTGCTTTCGGAAAAGAAGAAAAAGAGGAATCGG
AGGAATAG

Upstream 100 bases:

>100_bases
TCCCGAACAAATGAAAAACCTTCTTTCCATGATGGTACGTTCCAGAATGAGTGAAAATCCGGCCGACCATAAAATCGACG
TAAAACGATAGAGAAGAAAT

Downstream 100 bases:

>100_bases
ATTTCCCGATCTCGAAAAAATTTCCGACCGTTTTAATTCGAATAAAATCGCCCATAAACTATTTCCGGCCTTTTGAGAGA
AAGGACAGTACGAAATGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MFFVLGLIYTVGLDVFLILMGLTAFTGLTFLFFKEVIYPAIKTGSAGVGTPPEEGDRFLLVVSESQRNVRFSVGQTSGNI
RTYCNAIADNHLVFNLKKAKDSEDYEIQILRNSFVLFKPPGMPTFSKMESAEKLDSYEVIGKNADFRISDKVVKERMIQY
FEISLSSEFFINNFGKERMRFIFTITKIHPGLNRKVPIKKGLFAFGKEEKEESEE

Sequences:

>Translated_215_residues
MFFVLGLIYTVGLDVFLILMGLTAFTGLTFLFFKEVIYPAIKTGSAGVGTPPEEGDRFLLVVSESQRNVRFSVGQTSGNI
RTYCNAIADNHLVFNLKKAKDSEDYEIQILRNSFVLFKPPGMPTFSKMESAEKLDSYEVIGKNADFRISDKVVKERMIQY
FEISLSSEFFINNFGKERMRFIFTITKIHPGLNRKVPIKKGLFAFGKEEKEESEE
>Mature_215_residues
MFFVLGLIYTVGLDVFLILMGLTAFTGLTFLFFKEVIYPAIKTGSAGVGTPPEEGDRFLLVVSESQRNVRFSVGQTSGNI
RTYCNAIADNHLVFNLKKAKDSEDYEIQILRNSFVLFKPPGMPTFSKMESAEKLDSYEVIGKNADFRISDKVVKERMIQY
FEISLSSEFFINNFGKERMRFIFTITKIHPGLNRKVPIKKGLFAFGKEEKEESEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24492; Mature: 24492

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFVLGLIYTVGLDVFLILMGLTAFTGLTFLFFKEVIYPAIKTGSAGVGTPPEEGDRFLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
VVSESQRNVRFSVGQTSGNIRTYCNAIADNHLVFNLKKAKDSEDYEIQILRNSFVLFKPP
EEECCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCEEEECCC
GMPTFSKMESAEKLDSYEVIGKNADFRISDKVVKERMIQYFEISLSSEFFINNFGKERMR
CCCHHHHHHHHHHCCCHHEECCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHH
FIFTITKIHPGLNRKVPIKKGLFAFGKEEKEESEE
HEEEEEHCCCCCCCCCCHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MFFVLGLIYTVGLDVFLILMGLTAFTGLTFLFFKEVIYPAIKTGSAGVGTPPEEGDRFLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
VVSESQRNVRFSVGQTSGNIRTYCNAIADNHLVFNLKKAKDSEDYEIQILRNSFVLFKPP
EEECCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCEEEECCC
GMPTFSKMESAEKLDSYEVIGKNADFRISDKVVKERMIQYFEISLSSEFFINNFGKERMR
CCCHHHHHHHHHHCCCHHEECCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHH
FIFTITKIHPGLNRKVPIKKGLFAFGKEEKEESEE
HEEEEEHCCCCCCCCCCHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA