Click here to switch to the map view.

The map label for this gene is 116328078

Identifier: 116328078

GI number: 116328078

Start: 1608297

End: 1608923

Strand: Reverse

Name: 116328078

Synonym: LBL_1375

Alternate gene names: NA

Gene position: 1608923-1608297 (Counterclockwise)

Preceding gene: 116328086

Following gene: 116328068

Centisome position: 44.51

GC content: 39.55

Gene sequence:

>627_bases
ATGTCTCATCAAGAACAAACAACCGAATCCTTAATCCGAAAAATGGCCAAAGAACCTCCGATTCGAAAAAATAGTTGGAA
TTGGTTCGTAATTTTAGGTGTGGTGACTCTCACATCGCTTTACCTTCTTCATTTGCACCCGATTTCGAGCCGTTTCATTC
ATTTGCCAACTTTATTGCCTGATTTTTTTTGGATTTCTCTCATCACTCTTTATTCGTTTTGGACCTTATCCAAATTGCGT
TTTCCGGAAGAATCCTTTACCCAAACCGCACGTTTTCCACTACCTCTCGCATTTCTTTGGATCTTTTATTCGATATGTAT
GTTCGTCTGGGATTTGATCGGAGACAACAAAATCGATATTCATATCGGGAGATGTTGGATCATCCTTTCTCTTTCCAGCG
TTCTTTTAGCGGGAAGTGGGATTCTGATCTTAAAAAACGGAAAACCAGGAAATCCCGTTTTAGCGGCCGCGGTTCTTTCC
GTTTCTAACTTAGCTTTTGCAAACTTCTGTTTGAAGTTCGTTTGTTCGGATCAATCTTCGTTCCACATTCTCGTTTCGCA
CGTTTCTACCAGTTTGCTCCTTTTTGTATTCGGTTTTTTCGTATTTAAGAACATTTTAAAATGGTAG

Upstream 100 bases:

>100_bases
AAAAAACGAAAACCGATTCCCTCCAAATTGAATTGGGAAGAAGTTATTGCCCAACCATTCTCCAAAATTGGGAAATTTCC
TCTGTAAAGAGCACAAAACA

Downstream 100 bases:

>100_bases
CCGAGTTCCGACAAAATCTCCCGTGAAAGGAGCAGCCCCGGATTGGGTGGTGTGGCGGGTTCGCGGGGAAACCCGGGAAA
TTTTTCTCTATCAGAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSHQEQTTESLIRKMAKEPPIRKNSWNWFVILGVVTLTSLYLLHLHPISSRFIHLPTLLPDFFWISLITLYSFWTLSKLR
FPEESFTQTARFPLPLAFLWIFYSICMFVWDLIGDNKIDIHIGRCWIILSLSSVLLAGSGILILKNGKPGNPVLAAAVLS
VSNLAFANFCLKFVCSDQSSFHILVSHVSTSLLLFVFGFFVFKNILKW

Sequences:

>Translated_208_residues
MSHQEQTTESLIRKMAKEPPIRKNSWNWFVILGVVTLTSLYLLHLHPISSRFIHLPTLLPDFFWISLITLYSFWTLSKLR
FPEESFTQTARFPLPLAFLWIFYSICMFVWDLIGDNKIDIHIGRCWIILSLSSVLLAGSGILILKNGKPGNPVLAAAVLS
VSNLAFANFCLKFVCSDQSSFHILVSHVSTSLLLFVFGFFVFKNILKW
>Mature_207_residues
SHQEQTTESLIRKMAKEPPIRKNSWNWFVILGVVTLTSLYLLHLHPISSRFIHLPTLLPDFFWISLITLYSFWTLSKLRF
PEESFTQTARFPLPLAFLWIFYSICMFVWDLIGDNKIDIHIGRCWIILSLSSVLLAGSGILILKNGKPGNPVLAAAVLSV
SNLAFANFCLKFVCSDQSSFHILVSHVSTSLLLFVFGFFVFKNILKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23827; Mature: 23695

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHQEQTTESLIRKMAKEPPIRKNSWNWFVILGVVTLTSLYLLHLHPISSRFIHLPTLLP
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEECHHHHH
DFFWISLITLYSFWTLSKLRFPEESFTQTARFPLPLAFLWIFYSICMFVWDLIGDNKIDI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
HIGRCWIILSLSSVLLAGSGILILKNGKPGNPVLAAAVLSVSNLAFANFCLKFVCSDQSS
EECHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FHILVSHVSTSLLLFVFGFFVFKNILKW
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHQEQTTESLIRKMAKEPPIRKNSWNWFVILGVVTLTSLYLLHLHPISSRFIHLPTLLP
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEECHHHHH
DFFWISLITLYSFWTLSKLRFPEESFTQTARFPLPLAFLWIFYSICMFVWDLIGDNKIDI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
HIGRCWIILSLSSVLLAGSGILILKNGKPGNPVLAAAVLSVSNLAFANFCLKFVCSDQSS
EECHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FHILVSHVSTSLLLFVFGFFVFKNILKW
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA