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The map label for this gene is yjjU [C]

Identifier: 116328004

GI number: 116328004

Start: 1519785

End: 1520729

Strand: Reverse

Name: yjjU [C]

Synonym: LBL_1295

Alternate gene names: 116328004

Gene position: 1520729-1519785 (Counterclockwise)

Preceding gene: 116328005

Following gene: 116328002

Centisome position: 42.07

GC content: 43.17

Gene sequence:

>945_bases
ATGAAAATCCCGATAGCAAAAGGAAGCAAACGCGCCCTTCTCGTAGAAGGCGGCGGGATGAAAGGGGCGTTTGCCGGTGG
CGCGTTACATGCTTTGCATACCCTAGTTTCCCCGAAACATTACGATTTGGTCGTAGCGGTTTCCTCAGGTGCCTGCTCGG
CCGCTTATTACGTAACAATGCCCAAGCCAGAGCCTGAAAAAAGCTTAAAAACTCTTGCGATTTGGTACATTGAACTCGCC
GGAAGAAAACTTATATCTCCCTTTCACCCCTTTCAGGGAAAAACTTTTTTAGACCAAGAATATCTCGTAGATGATCTGTT
CGGACACAAATATCCCTTACCGGCGGAGAATTTTGAAAAATTCGGTCTACCCGAATTAAGAATCGCGGTCAGCAATCTTC
AGACTCGAACAATCGAATACGTGCGTGCAACTTCCTCGAATATATTCGATCTCTTGAAAGCCGCAACGTCTCTTCCGATC
GCAACCAGAGGGAAACATAAAGTGGACGGGAAATTATATTCAGACGCGGCAATACTCAACCCTCTTCCGCTAGGAGATTT
GATTGAGGCAGGTTATAAAGATATTACCGTTGTCTTAAATTCTCCCGTGGAAAGGATCTCTCCTCCGTTCGGAATGCTGA
CCAGTCTTCTATCTTTTCCAAAAGACTGGAAAATGGCAAAACTGATGAATAGATGGCATCATCACCATTTCAATCTTGCA
CGAGCAGTTGCACAAAAACCTCCGGAAGGAGTTCTAATCCATACGATATCTCCCGAAAATCCTTTACCGGTAACTCTCGT
TACTACAAATGCGAATAAACTGAAAGAGGCGGTAAATTTAGGAATTTCTAAAGGAGAAGAAATTGGAAAACTCCTTTCGA
AACTTTTTACGAAAGATAAAGCTGGACAAAAGAAATCCATATCCAGAAGAAAAAAGACAAAATAA

Upstream 100 bases:

>100_bases
AAATCGCAAGTCTCACCAACCTTACTTATCCATTCGAATTCAAAAAATCTAAATTAGAAAGTTTTGAAGAAATAGATTCC
ACAAAGGTTGAATCAATCAT

Downstream 100 bases:

>100_bases
TTCCCACCTATAGACGAAACATAAGCCTGATCGCAATCAGGTAGGAACGGGATAAGAAAAATAGCTTCTTATCCCGGACA
ACATCAACCGAGAGTGTAGT

Product: hydrolase

Products: NA

Alternate protein names: Patatin-Like Phospholipase; Hydrolase

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKIPIAKGSKRALLVEGGGMKGAFAGGALHALHTLVSPKHYDLVVAVSSGACSAAYYVTMPKPEPEKSLKTLAIWYIELA
GRKLISPFHPFQGKTFLDQEYLVDDLFGHKYPLPAENFEKFGLPELRIAVSNLQTRTIEYVRATSSNIFDLLKAATSLPI
ATRGKHKVDGKLYSDAAILNPLPLGDLIEAGYKDITVVLNSPVERISPPFGMLTSLLSFPKDWKMAKLMNRWHHHHFNLA
RAVAQKPPEGVLIHTISPENPLPVTLVTTNANKLKEAVNLGISKGEEIGKLLSKLFTKDKAGQKKSISRRKKTK

Sequences:

>Translated_314_residues
MKIPIAKGSKRALLVEGGGMKGAFAGGALHALHTLVSPKHYDLVVAVSSGACSAAYYVTMPKPEPEKSLKTLAIWYIELA
GRKLISPFHPFQGKTFLDQEYLVDDLFGHKYPLPAENFEKFGLPELRIAVSNLQTRTIEYVRATSSNIFDLLKAATSLPI
ATRGKHKVDGKLYSDAAILNPLPLGDLIEAGYKDITVVLNSPVERISPPFGMLTSLLSFPKDWKMAKLMNRWHHHHFNLA
RAVAQKPPEGVLIHTISPENPLPVTLVTTNANKLKEAVNLGISKGEEIGKLLSKLFTKDKAGQKKSISRRKKTK
>Mature_314_residues
MKIPIAKGSKRALLVEGGGMKGAFAGGALHALHTLVSPKHYDLVVAVSSGACSAAYYVTMPKPEPEKSLKTLAIWYIELA
GRKLISPFHPFQGKTFLDQEYLVDDLFGHKYPLPAENFEKFGLPELRIAVSNLQTRTIEYVRATSSNIFDLLKAATSLPI
ATRGKHKVDGKLYSDAAILNPLPLGDLIEAGYKDITVVLNSPVERISPPFGMLTSLLSFPKDWKMAKLMNRWHHHHFNLA
RAVAQKPPEGVLIHTISPENPLPVTLVTTNANKLKEAVNLGISKGEEIGKLLSKLFTKDKAGQKKSISRRKKTK

Specific function: Unknown

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790837, Length=294, Percent_Identity=22.7891156462585, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34550; Mature: 34550

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPIAKGSKRALLVEGGGMKGAFAGGALHALHTLVSPKHYDLVVAVSSGACSAAYYVTM
CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEC
PKPEPEKSLKTLAIWYIELAGRKLISPFHPFQGKTFLDQEYLVDDLFGHKYPLPAENFEK
CCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCHHH
FGLPELRIAVSNLQTRTIEYVRATSSNIFDLLKAATSLPIATRGKHKVDGKLYSDAAILN
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHCC
PLPLGDLIEAGYKDITVVLNSPVERISPPFGMLTSLLSFPKDWKMAKLMNRWHHHHFNLA
CCCCHHHHHCCCCEEEEEECCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RAVAQKPPEGVLIHTISPENPLPVTLVTTNANKLKEAVNLGISKGEEIGKLLSKLFTKDK
HHHHCCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
AGQKKSISRRKKTK
CCCHHHHHHHHCCC
>Mature Secondary Structure
MKIPIAKGSKRALLVEGGGMKGAFAGGALHALHTLVSPKHYDLVVAVSSGACSAAYYVTM
CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEC
PKPEPEKSLKTLAIWYIELAGRKLISPFHPFQGKTFLDQEYLVDDLFGHKYPLPAENFEK
CCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCHHH
FGLPELRIAVSNLQTRTIEYVRATSSNIFDLLKAATSLPIATRGKHKVDGKLYSDAAILN
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHCC
PLPLGDLIEAGYKDITVVLNSPVERISPPFGMLTSLLSFPKDWKMAKLMNRWHHHHFNLA
CCCCHHHHHCCCCEEEEEECCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RAVAQKPPEGVLIHTISPENPLPVTLVTTNANKLKEAVNLGISKGEEIGKLLSKLFTKDK
HHHHCCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
AGQKKSISRRKKTK
CCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA