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The map label for this gene is 116328002

Identifier: 116328002

GI number: 116328002

Start: 1518768

End: 1519208

Strand: Reverse

Name: 116328002

Synonym: LBL_1293

Alternate gene names: NA

Gene position: 1519208-1518768 (Counterclockwise)

Preceding gene: 116328004

Following gene: 116327996

Centisome position: 42.03

GC content: 38.78

Gene sequence:

>441_bases
ATGAAAGAAAAATTATCGAAACAGTCGATCGACACGTGGGCCGCCGGATTGAAATTTTATACGTCCGCTTCCTCCAAAAT
CGAATCCAATCTTACGAAAATGAAGGCAATTTCCCTCACTTGGTACGACGTACTTTATGCAGTTTATACAAAACCTAAAA
AACGATCCAGAATGTCCGATATAGCTCAAGAAATTATTCTCAGTAAAAGCGCGTTGACTCGTTCTGTTGATAAATTGGTC
GCCGAGGGTTTTTTAAAACGAGAAAGAAGCGAAGAAGACGCAAGAGAGTTCATCATAGAAATCACCCCTTCAGGAATTCA
AGCCCTAAGAGACTCTTGGCCGATTTATGAAGAAGGTATTCGGGAAATTTTCGTGTCCAAACTGACTCCCAAGGAAACAA
GCGAACTTTTAAGAATTTTTAGAAAACTGAATAAATATTAA

Upstream 100 bases:

>100_bases
TCACCGTGTAAAATTCGGAAAGAACTTAGTTGCAATCGCAACTACTCCATTTGTCCAAATAATGATTGCAAATGCAACTA
AAAAATTAACTTTGACTTCA

Downstream 100 bases:

>100_bases
AAAATATAAACTCATACTTTTAGAAAAAATCTTTTCAACTTTATTTTGCGGAAACTTTAATCATTTTCATCAAACCACAA
AGAAGGAGAAATCCCAAAGT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator-Like Protein; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKEKLSKQSIDTWAAGLKFYTSASSKIESNLTKMKAISLTWYDVLYAVYTKPKKRSRMSDIAQEIILSKSALTRSVDKLV
AEGFLKRERSEEDAREFIIEITPSGIQALRDSWPIYEEGIREIFVSKLTPKETSELLRIFRKLNKY

Sequences:

>Translated_146_residues
MKEKLSKQSIDTWAAGLKFYTSASSKIESNLTKMKAISLTWYDVLYAVYTKPKKRSRMSDIAQEIILSKSALTRSVDKLV
AEGFLKRERSEEDAREFIIEITPSGIQALRDSWPIYEEGIREIFVSKLTPKETSELLRIFRKLNKY
>Mature_146_residues
MKEKLSKQSIDTWAAGLKFYTSASSKIESNLTKMKAISLTWYDVLYAVYTKPKKRSRMSDIAQEIILSKSALTRSVDKLV
AEGFLKRERSEEDAREFIIEITPSGIQALRDSWPIYEEGIREIFVSKLTPKETSELLRIFRKLNKY

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16919; Mature: 16919

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKLSKQSIDTWAAGLKFYTSASSKIESNLTKMKAISLTWYDVLYAVYTKPKKRSRMSD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IAQEIILSKSALTRSVDKLVAEGFLKRERSEEDAREFIIEITPSGIQALRDSWPIYEEGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHH
REIFVSKLTPKETSELLRIFRKLNKY
HHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEKLSKQSIDTWAAGLKFYTSASSKIESNLTKMKAISLTWYDVLYAVYTKPKKRSRMSD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IAQEIILSKSALTRSVDKLVAEGFLKRERSEEDAREFIIEITPSGIQALRDSWPIYEEGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHH
REIFVSKLTPKETSELLRIFRKLNKY
HHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA