| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327999
Identifier: 116327999
GI number: 116327999
Start: 1511312
End: 1512247
Strand: Direct
Name: 116327999
Synonym: LBL_1289
Alternate gene names: NA
Gene position: 1511312-1512247 (Clockwise)
Preceding gene: 116327998
Following gene: 116328000
Centisome position: 41.81
GC content: 40.71
Gene sequence:
>936_bases GTGGAAATCAGATCCAGACTTTCCGGGGATATTCTCAAACTCAAACTTAGAGGACATTTGGACTCTGTGAGCGCAGAGGA TTTTTATTCCTATTTGAAATCAAAATGGGAGGAGGGGATTCGCAAATTTTTATTCTCTTGCGAAGAGTTGGAGTATATAG AATCCGAAGGGATCTGCGTTCTTGCAAGGTTCGAGAACTTCTTGAAAAACAGAGGGGCATCTTCCGCTTATTGTGCGTTC AACGAAGAATGCAAAACGCTTTTGAGCTTTTTGGGCTTCGGTAGATCAATCGCTTTTTTTGAAGATCTTCAACGTGCAGA GGAATATCTTTCTTTGATCAAAATTCAGGATCAGAGAAGGAATCGATCCGCTTCGACTCCAATCTCAAGGATCAAAAAAA ATTCTCCGGTACAGTTTTATTCTTCCGGTTCTTCTCCAAAAGATACGATTTCCCGCGATTCCCGCTCGATGTATGTTCCG GAGATTCAGACCGTTCCGGAAGTTGAACTTGAAATCGAATCAAATAAGCCTCAAAAAATTTCCGAGCCGGAGAATTTAAA AACGGAAAATCCTCACAGTATTTCTAGTCAATCCCAGAGATTGCAGGCGTTTTTAAGCGAACAAAAGGAATTGAAAGAAT CTCCCGTTTCTCAAAAAGAAGTTTCGGTATTTTCTGAGAATGCTTCTTTATCCGATGTTTCTTCTGCGTCTTTTGTTTCG GATCGAAGTTCCGAAGTATATTCGGCAAAGTCCGTTCTTGAAAAAGCGATTCAAAACGAAAGGAATTTTCCCAAAAGAAT TATTTATTGCGGGGCTTGTTCTTCTAGAATTCGAGTTTCAAAACCGGGAAGATACCAGTGCCCGGCCTGTCGGATTCAGT TTGACTTGAACACCATGGACGGAGTTCGATACTTAGAAAAACTTATAGGAACTTAA
Upstream 100 bases:
>100_bases TGAATCGGCGGTCCAAACGGAGCCGATTATTTCTCAAATAAATCCGAACATTGTCGCTGAAGAAGTTTTGGACGCAATTT ATTTAGGGTAAGATACAGAA
Downstream 100 bases:
>100_bases GAATTGCCCAACGCCGCATCACGAAGTATTGCACTTTCTTTTTACACGTTTTTATCCAGAATTTTAGGGCTTATCCGGGA TCATTTTATGGCGGTTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MEIRSRLSGDILKLKLRGHLDSVSAEDFYSYLKSKWEEGIRKFLFSCEELEYIESEGICVLARFENFLKNRGASSAYCAF NEECKTLLSFLGFGRSIAFFEDLQRAEEYLSLIKIQDQRRNRSASTPISRIKKNSPVQFYSSGSSPKDTISRDSRSMYVP EIQTVPEVELEIESNKPQKISEPENLKTENPHSISSQSQRLQAFLSEQKELKESPVSQKEVSVFSENASLSDVSSASFVS DRSSEVYSAKSVLEKAIQNERNFPKRIIYCGACSSRIRVSKPGRYQCPACRIQFDLNTMDGVRYLEKLIGT
Sequences:
>Translated_311_residues MEIRSRLSGDILKLKLRGHLDSVSAEDFYSYLKSKWEEGIRKFLFSCEELEYIESEGICVLARFENFLKNRGASSAYCAF NEECKTLLSFLGFGRSIAFFEDLQRAEEYLSLIKIQDQRRNRSASTPISRIKKNSPVQFYSSGSSPKDTISRDSRSMYVP EIQTVPEVELEIESNKPQKISEPENLKTENPHSISSQSQRLQAFLSEQKELKESPVSQKEVSVFSENASLSDVSSASFVS DRSSEVYSAKSVLEKAIQNERNFPKRIIYCGACSSRIRVSKPGRYQCPACRIQFDLNTMDGVRYLEKLIGT >Mature_311_residues MEIRSRLSGDILKLKLRGHLDSVSAEDFYSYLKSKWEEGIRKFLFSCEELEYIESEGICVLARFENFLKNRGASSAYCAF NEECKTLLSFLGFGRSIAFFEDLQRAEEYLSLIKIQDQRRNRSASTPISRIKKNSPVQFYSSGSSPKDTISRDSRSMYVP EIQTVPEVELEIESNKPQKISEPENLKTENPHSISSQSQRLQAFLSEQKELKESPVSQKEVSVFSENASLSDVSSASFVS DRSSEVYSAKSVLEKAIQNERNFPKRIIYCGACSSRIRVSKPGRYQCPACRIQFDLNTMDGVRYLEKLIGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35429; Mature: 35429
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRSRLSGDILKLKLRGHLDSVSAEDFYSYLKSKWEEGIRKFLFSCEELEYIESEGICV CCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LARFENFLKNRGASSAYCAFNEECKTLLSFLGFGRSIAFFEDLQRAEEYLSLIKIQDQRR EHHHHHHHHHCCCCCEEHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NRSASTPISRIKKNSPVQFYSSGSSPKDTISRDSRSMYVPEIQTVPEVELEIESNKPQKI CCCCCCCHHHHHCCCCEEEECCCCCCHHHHCCCCCCEECCCCCCCCCEEEEECCCCCCCC SEPENLKTENPHSISSQSQRLQAFLSEQKELKESPVSQKEVSVFSENASLSDVSSASFVS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHH DRSSEVYSAKSVLEKAIQNERNFPKRIIYCGACSSRIRVSKPGRYQCPACRIQFDLNTMD CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCCEEEEEEECCHHH GVRYLEKLIGT HHHHHHHHHCC >Mature Secondary Structure MEIRSRLSGDILKLKLRGHLDSVSAEDFYSYLKSKWEEGIRKFLFSCEELEYIESEGICV CCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LARFENFLKNRGASSAYCAFNEECKTLLSFLGFGRSIAFFEDLQRAEEYLSLIKIQDQRR EHHHHHHHHHCCCCCEEHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NRSASTPISRIKKNSPVQFYSSGSSPKDTISRDSRSMYVPEIQTVPEVELEIESNKPQKI CCCCCCCHHHHHCCCCEEEECCCCCCHHHHCCCCCCEECCCCCCCCCEEEEECCCCCCCC SEPENLKTENPHSISSQSQRLQAFLSEQKELKESPVSQKEVSVFSENASLSDVSSASFVS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHH DRSSEVYSAKSVLEKAIQNERNFPKRIIYCGACSSRIRVSKPGRYQCPACRIQFDLNTMD CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCCEEEEEEECCHHH GVRYLEKLIGT HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA