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The map label for this gene is 116327879

Identifier: 116327879

GI number: 116327879

Start: 1375057

End: 1376481

Strand: Reverse

Name: 116327879

Synonym: LBL_1163

Alternate gene names: NA

Gene position: 1376481-1375057 (Counterclockwise)

Preceding gene: 116327954

Following gene: 116327878

Centisome position: 38.08

GC content: 43.09

Gene sequence:

>1425_bases
ATGAATCACATTTTTGTTTTTCTTTTTATACTTCTTCAGGCTTGCACTCCGGCTAAGACCTTAGGCGTGGCGGCCCCGGA
AATAAACGACTCGTGGATTCAAATTTTAGTCCGAGGAATCGCAAGAATTGAAACGGAAGCAATCGATAACGTTTTTTCCG
AATCCGCCGACCTCGAAGATTCCAAAACATTTGAATTAGAACGCACATTGTCGATCGGAGCACCTAACGCGAGAACTGTC
GGTAAAGGCCTAGCCATGGACGAAAAAGGTTTTATTTATATCACGGGAAATACGGATGAAGGCGTTTACAATGCGGCGGC
CGCTGGAATCCAGGATATCATCCTTGGAAAGTACGATTCTCAAATGAATCCGATTTGGACGAAACAAATCGGAAACGCAA
ACACAACTTTGTCTGTAAACGATATTGCAGTCGATACAAGCGATAACGTGTACATAACCGGCAATACAAACAGAAATTAT
CCGGGAGCACTTACGGGAATAGAAGACATGTTCCTAATCAAACTCGATTCCAACGGAAATCAAATCTGGTCTAGACAAAA
GGGGATTGTAAATCATGGAATATTTTCCAACAAAATGACGTTAGATTCGGCTGGAAATATTTATATAGTTGGACATACAG
ACGGCCCCTTTGGAGGTCCTCTGACCGGATCAAACGGATTTATCATTAAGTTTAAAAACAACGGAGACGAGGATTGGGTC
CGTCAAATTGGAGTCGATGGAGCGGAAAGTAGTCCGAAAGGAATCGCCTTCGACAAGACCACAAACAACGTTTATATAAC
CGGTACCGGAAACGCAAACTATGAGACAAATACACTCCCCAGTATCGGAATCAGGGACATGTTTATTTTTAAATACGACA
GCAATGGGAACGGGAACGGGCGATTTTTCGCCCAACTCGGTTCTACCGACAAGTTCTTCGATGATGTTTCCATAACTGTA
GATTCATTTGGAAATATATTGATAGGCGGATCAAGTAACGGTCGATTCGAAACAACGTTAGGCGGAACGAATAAACTCGG
GACCATAGCCAAATACGATTCACGAGGCACGTTACAATGGATCCGTCAATTCGGCCCAACCAGTAGTTTAGCAAAACGTA
CCACAATCAATTCGATCATTACCGACAAAAGCGGAAATATTTTTACAACCGGTTCTACCAACGGAAATATCGCGGATGGA
GGGGATGATTCGTTAGGAGATAGCGATGCCTTTCTCACAAAGCACAATTCATCCGGACAAAACAAATGGATAGAACGAAT
TGGTAGCCCCGAAGCAACAACATCTGGGAACGGAATTGTAAAAGACCGAGAAGGAAATCTTTACACGATTGGAGATACGA
CCCGAGGAATAAACGGGGCTCCTAGACAGGGAAACACCGATATCTTCATCGTAAAATATAAATGA

Upstream 100 bases:

>100_bases
ATCATGTAGGGGAAAATACCCTATACCCTGAAAAGTTTCTATCTCAAAAAGCCTCGAAGGTTTTAGTCGAAAATAACGTT
TGGAAATTGGGAAAAGTATC

Downstream 100 bases:

>100_bases
TCATTTTTTTTAGAAGCTATCTCAAAAATATCTTAGAATGATTGGAATTGGCATTTTAAACAAAGATAAAGTATTTTTGA
GATAGTGTCACTTTCCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MNHIFVFLFILLQACTPAKTLGVAAPEINDSWIQILVRGIARIETEAIDNVFSESADLEDSKTFELERTLSIGAPNARTV
GKGLAMDEKGFIYITGNTDEGVYNAAAAGIQDIILGKYDSQMNPIWTKQIGNANTTLSVNDIAVDTSDNVYITGNTNRNY
PGALTGIEDMFLIKLDSNGNQIWSRQKGIVNHGIFSNKMTLDSAGNIYIVGHTDGPFGGPLTGSNGFIIKFKNNGDEDWV
RQIGVDGAESSPKGIAFDKTTNNVYITGTGNANYETNTLPSIGIRDMFIFKYDSNGNGNGRFFAQLGSTDKFFDDVSITV
DSFGNILIGGSSNGRFETTLGGTNKLGTIAKYDSRGTLQWIRQFGPTSSLAKRTTINSIITDKSGNIFTTGSTNGNIADG
GDDSLGDSDAFLTKHNSSGQNKWIERIGSPEATTSGNGIVKDREGNLYTIGDTTRGINGAPRQGNTDIFIVKYK

Sequences:

>Translated_474_residues
MNHIFVFLFILLQACTPAKTLGVAAPEINDSWIQILVRGIARIETEAIDNVFSESADLEDSKTFELERTLSIGAPNARTV
GKGLAMDEKGFIYITGNTDEGVYNAAAAGIQDIILGKYDSQMNPIWTKQIGNANTTLSVNDIAVDTSDNVYITGNTNRNY
PGALTGIEDMFLIKLDSNGNQIWSRQKGIVNHGIFSNKMTLDSAGNIYIVGHTDGPFGGPLTGSNGFIIKFKNNGDEDWV
RQIGVDGAESSPKGIAFDKTTNNVYITGTGNANYETNTLPSIGIRDMFIFKYDSNGNGNGRFFAQLGSTDKFFDDVSITV
DSFGNILIGGSSNGRFETTLGGTNKLGTIAKYDSRGTLQWIRQFGPTSSLAKRTTINSIITDKSGNIFTTGSTNGNIADG
GDDSLGDSDAFLTKHNSSGQNKWIERIGSPEATTSGNGIVKDREGNLYTIGDTTRGINGAPRQGNTDIFIVKYK
>Mature_474_residues
MNHIFVFLFILLQACTPAKTLGVAAPEINDSWIQILVRGIARIETEAIDNVFSESADLEDSKTFELERTLSIGAPNARTV
GKGLAMDEKGFIYITGNTDEGVYNAAAAGIQDIILGKYDSQMNPIWTKQIGNANTTLSVNDIAVDTSDNVYITGNTNRNY
PGALTGIEDMFLIKLDSNGNQIWSRQKGIVNHGIFSNKMTLDSAGNIYIVGHTDGPFGGPLTGSNGFIIKFKNNGDEDWV
RQIGVDGAESSPKGIAFDKTTNNVYITGTGNANYETNTLPSIGIRDMFIFKYDSNGNGNGRFFAQLGSTDKFFDDVSITV
DSFGNILIGGSSNGRFETTLGGTNKLGTIAKYDSRGTLQWIRQFGPTSSLAKRTTINSIITDKSGNIFTTGSTNGNIADG
GDDSLGDSDAFLTKHNSSGQNKWIERIGSPEATTSGNGIVKDREGNLYTIGDTTRGINGAPRQGNTDIFIVKYK

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51008; Mature: 51008

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHIFVFLFILLQACTPAKTLGVAAPEINDSWIQILVRGIARIETEAIDNVFSESADLED
CCHHHHHHHHHHHHCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SKTFELERTLSIGAPNARTVGKGLAMDEKGFIYITGNTDEGVYNAAAAGIQDIILGKYDS
CCEEEEEEEEECCCCCCHHHCCCCEECCCCEEEEECCCCCCHHHHHHHCHHHHEEECCCC
QMNPIWTKQIGNANTTLSVNDIAVDTSDNVYITGNTNRNYPGALTGIEDMFLIKLDSNGN
CCCCCHHHHCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCC
QIWSRQKGIVNHGIFSNKMTLDSAGNIYIVGHTDGPFGGPLTGSNGFIIKFKNNGDEDWV
CHHHHCCCCHHCCEECCCEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHH
RQIGVDGAESSPKGIAFDKTTNNVYITGTGNANYETNTLPSIGIRDMFIFKYDSNGNGNG
HHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCE
RFFAQLGSTDKFFDDVSITVDSFGNILIGGSSNGRFETTLGGTNKLGTIAKYDSRGTLQW
EEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCEEEEECCCCCCCCCEEEECCCCHHHH
IRQFGPTSSLAKRTTINSIITDKSGNIFTTGSTNGNIADGGDDSLGDSDAFLTKHNSSGQ
HHHCCCCHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCH
NKWIERIGSPEATTSGNGIVKDREGNLYTIGDTTRGINGAPRQGNTDIFIVKYK
HHHHHHCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MNHIFVFLFILLQACTPAKTLGVAAPEINDSWIQILVRGIARIETEAIDNVFSESADLED
CCHHHHHHHHHHHHCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SKTFELERTLSIGAPNARTVGKGLAMDEKGFIYITGNTDEGVYNAAAAGIQDIILGKYDS
CCEEEEEEEEECCCCCCHHHCCCCEECCCCEEEEECCCCCCHHHHHHHCHHHHEEECCCC
QMNPIWTKQIGNANTTLSVNDIAVDTSDNVYITGNTNRNYPGALTGIEDMFLIKLDSNGN
CCCCCHHHHCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCC
QIWSRQKGIVNHGIFSNKMTLDSAGNIYIVGHTDGPFGGPLTGSNGFIIKFKNNGDEDWV
CHHHHCCCCHHCCEECCCEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHH
RQIGVDGAESSPKGIAFDKTTNNVYITGTGNANYETNTLPSIGIRDMFIFKYDSNGNGNG
HHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCE
RFFAQLGSTDKFFDDVSITVDSFGNILIGGSSNGRFETTLGGTNKLGTIAKYDSRGTLQW
EEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCEEEEECCCCCCCCCEEEECCCCHHHH
IRQFGPTSSLAKRTTINSIITDKSGNIFTTGSTNGNIADGGDDSLGDSDAFLTKHNSSGQ
HHHCCCCHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCH
NKWIERIGSPEATTSGNGIVKDREGNLYTIGDTTRGINGAPRQGNTDIFIVKYK
HHHHHHCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA