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The map label for this gene is rdoA [H]

Identifier: 116327865

GI number: 116327865

Start: 1354157

End: 1355158

Strand: Reverse

Name: rdoA [H]

Synonym: LBL_1145

Alternate gene names: 116327865

Gene position: 1355158-1354157 (Counterclockwise)

Preceding gene: 116327870

Following gene: 116327864

Centisome position: 37.49

GC content: 41.42

Gene sequence:

>1002_bases
ATGCTCGCATCTAACCCACGTTTTTCAAGCCCAGAAGGGGCGCCATTTTGCCTAAACAGTTTGGAAAATCGAGTCTTCGA
CCTTAGGTTGGAGGACGGTTCTCATATCATTTCCAAATTCTATCGTCCCGGAAGATGGAACAGAGAACAAATTTTAGAAG
AACATCATTTTCTACAAGATCTGAAAGAAGAAGAAATCCCTGTCTGTACTCCCTTCCTATTTGAAAATGAAAGTAGTCTC
TCTTTGTTTCAAAAAGGTATTTATTATTCTTTCTGGCCCCGAGTCGGAGGAAGGTCTCCTGACGAACTGAATCCGGAAAA
TCTCAGAATTTTAGGAAGGCTTCTTGCTAGAACCCATAACATCGGTCAGGCGAAACATTTCGAACACAGGATCACACTCG
ATTCCGAAACATATGGAATCGCTCCTTTAGAAACCCTACTTAAGGGAGAATGGATTCCTCCGAGTTGCAAAAAAGACTAT
CTTGAAGTCGCAAACCGGATTTTAGATCTCTTTCGGGAAAAAATAGAAACGGTTCCTCTGCACAGAATTCACGGAGACTG
TCATAAGGGAAATCTACTCTTCGGAAAAGAAGGATGGTTTTTTGTCGACTTTGACGACTGTCTAAAGGGTCCGGCAGTTC
AGGACTTTTGGATGCTGCTTTCCAGAGGAAAAGAAGAACTTGAAGAAAGAGAACATATTCTTTCCGGCTATAGGGAATTT
AAGGACGCCTGGTTTGATCTTGTGGAAATTCTTCGAGCAATGCGGTTTATTCATTATTCTGCCTGGATTTCCAGTAGGTT
TACGACAGATCCCTCCTTTCCGGTTGCCTTTCCCCATTTTGCAGGAAACGAATACTGGGAAAAAGAAACTCTCGAATTGA
AAGAACAATACAAACTGATTTACGACTCACTGGGAGGAAAAAATTTCTTTTCCGTTACAGAATCGACTTCTACAGAAGAA
GAACTCACCAACAAGGATTTTTTTGGGGATTTGGAAGATTAA

Upstream 100 bases:

>100_bases
TTAAATACGCGATTTGGATCGTTTCTTTGTGGACATCCATTCCTACATATACTTTTCTTTTCATTGCGTTCCTTCTGTTG
GTTTTTTTGTTTTGTGGTAA

Downstream 100 bases:

>100_bases
CCGGTTGATTTTGTAACACAAAAGTAATAATCACAGACGGGTTCACGGCAAAATTTCAGTTGTCCGGTTCCACAGATTTA
AAAGACTCAAGGATAACTCT

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MLASNPRFSSPEGAPFCLNSLENRVFDLRLEDGSHIISKFYRPGRWNREQILEEHHFLQDLKEEEIPVCTPFLFENESSL
SLFQKGIYYSFWPRVGGRSPDELNPENLRILGRLLARTHNIGQAKHFEHRITLDSETYGIAPLETLLKGEWIPPSCKKDY
LEVANRILDLFREKIETVPLHRIHGDCHKGNLLFGKEGWFFVDFDDCLKGPAVQDFWMLLSRGKEELEEREHILSGYREF
KDAWFDLVEILRAMRFIHYSAWISSRFTTDPSFPVAFPHFAGNEYWEKETLELKEQYKLIYDSLGGKNFFSVTESTSTEE
ELTNKDFFGDLED

Sequences:

>Translated_333_residues
MLASNPRFSSPEGAPFCLNSLENRVFDLRLEDGSHIISKFYRPGRWNREQILEEHHFLQDLKEEEIPVCTPFLFENESSL
SLFQKGIYYSFWPRVGGRSPDELNPENLRILGRLLARTHNIGQAKHFEHRITLDSETYGIAPLETLLKGEWIPPSCKKDY
LEVANRILDLFREKIETVPLHRIHGDCHKGNLLFGKEGWFFVDFDDCLKGPAVQDFWMLLSRGKEELEEREHILSGYREF
KDAWFDLVEILRAMRFIHYSAWISSRFTTDPSFPVAFPHFAGNEYWEKETLELKEQYKLIYDSLGGKNFFSVTESTSTEE
ELTNKDFFGDLED
>Mature_333_residues
MLASNPRFSSPEGAPFCLNSLENRVFDLRLEDGSHIISKFYRPGRWNREQILEEHHFLQDLKEEEIPVCTPFLFENESSL
SLFQKGIYYSFWPRVGGRSPDELNPENLRILGRLLARTHNIGQAKHFEHRITLDSETYGIAPLETLLKGEWIPPSCKKDY
LEVANRILDLFREKIETVPLHRIHGDCHKGNLLFGKEGWFFVDFDDCLKGPAVQDFWMLLSRGKEELEEREHILSGYREF
KDAWFDLVEILRAMRFIHYSAWISSRFTTDPSFPVAFPHFAGNEYWEKETLELKEQYKLIYDSLGGKNFFSVTESTSTEE
ELTNKDFFGDLED

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=288, Percent_Identity=39.2361111111111, Blast_Score=206, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 39061; Mature: 39061

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASNPRFSSPEGAPFCLNSLENRVFDLRLEDGSHIISKFYRPGRWNREQILEEHHFLQD
CCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
LKEEEIPVCTPFLFENESSLSLFQKGIYYSFWPRVGGRSPDELNPENLRILGRLLARTHN
HHHCCCCCCCCHHCCCCCHHHHHHHCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
IGQAKHFEHRITLDSETYGIAPLETLLKGEWIPPSCKKDYLEVANRILDLFREKIETVPL
CCCHHHHHEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
HRIHGDCHKGNLLFGKEGWFFVDFDDCLKGPAVQDFWMLLSRGKEELEEREHILSGYREF
HHHCCCCCCCCEEEECCCCEEEEHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KDAWFDLVEILRAMRFIHYSAWISSRFTTDPSFPVAFPHFAGNEYWEKETLELKEQYKLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH
YDSLGGKNFFSVTESTSTEEELTNKDFFGDLED
HHHCCCCCEEEECCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLASNPRFSSPEGAPFCLNSLENRVFDLRLEDGSHIISKFYRPGRWNREQILEEHHFLQD
CCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
LKEEEIPVCTPFLFENESSLSLFQKGIYYSFWPRVGGRSPDELNPENLRILGRLLARTHN
HHHCCCCCCCCHHCCCCCHHHHHHHCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
IGQAKHFEHRITLDSETYGIAPLETLLKGEWIPPSCKKDYLEVANRILDLFREKIETVPL
CCCHHHHHEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
HRIHGDCHKGNLLFGKEGWFFVDFDDCLKGPAVQDFWMLLSRGKEELEEREHILSGYREF
HHHCCCCCCCCEEEECCCCEEEEHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KDAWFDLVEILRAMRFIHYSAWISSRFTTDPSFPVAFPHFAGNEYWEKETLELKEQYKLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH
YDSLGGKNFFSVTESTSTEEELTNKDFFGDLED
HHHCCCCCEEEECCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]