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The map label for this gene is fliH [H]

Identifier: 116327839

GI number: 116327839

Start: 1313152

End: 1314075

Strand: Reverse

Name: fliH [H]

Synonym: LBL_1116

Alternate gene names: 116327839

Gene position: 1314075-1313152 (Counterclockwise)

Preceding gene: 116327840

Following gene: 116327838

Centisome position: 36.36

GC content: 46.65

Gene sequence:

>924_bases
ATGGCCAAACTCGTTTTTAAACCCATTCAAATCGCGGATATCAAAGATCAGGTGGAATTGGCAATTCCTGACAAATACAG
AAAGTTCCACAGAGACGAAGACGCGGAAGAGTTCGAGGTAGATCAAGAAGGGAATATCATTGAACAATACCAGGGCCCTT
CCATCGAAGAGATCGAAGCGGAACTGAGCCGTTACCGTGAAGAAAACGAAGAGCAGGTTCGTAAACTCCTCGAAGACGCA
AGAAGAAAATCCGAAGAAATCGAAGAAGAAGGACGCAAACGCGCCTTCCAAATGATTCAAGACTCCAAAGAAAAAGTCAA
ACTCGAGGAAGACACCGGCAAAGCGAAAGCGGAACAGCTTCTCGATCGCGCAAAGATGGAAGTCGAGAGAATGATCAAAG
AAGCCGAGATGAAGGTCGCAGAGATCGAACACGAGGCTTACTTAAAAGGTTATGACGCGGGACGGGAAGTCGGCTTTAAA
AAGGGCCAGGGCGAAGTACGGCGTCTTATCGATCGTTTGGGAACCATCGTCGGTAAGGCGATCGATATCCGAGAAGAAAT
CATCCAAGCTTCGGAAAAGCAGATGGTGGAGATGATCCTCATCATTGCACGCAAGGTGATCAAAGACGAAATTATAGAAA
GAAAGGAAATCGTTCTCAATAATATTAGAGAAGCGTTAAAGAGAATCAAAGACAGGGATCGAGTGGACATTCGAGTCAAC
TTCGCGGATTTAGAACTCACCACCGCACACAAAGACGAACTCATCAAACTCATGGAATCTCTCCGCAAAGTCAATATCTA
CGAAGACTCTCGTGTGGATCGGGGTGGGGTTATCATCGAAACCGACGTGGGCGCGATCGACGCAAGAATTTCCACTCAAC
TCAAAGAAATCGAGGAAGCGATCCGAAATGCGGAGCCGATCTAA

Upstream 100 bases:

>100_bases
CAGCCTCGCCGAAATGGAAACCGCTCAGAACGGAATCTTAGAAAAACTTCGGGACGAGATCGAGGAAGGAAGTATCAAAT
TTTGGAGAGCGACTTAACTC

Downstream 100 bases:

>100_bases
ACTCGAACCCGTTTCGGAATCGCGACCGTCCGCCGCCGTTGTCGGTCAGAAGCGTTTGTCTTTTTTCTCGGTTCGGAATT
CGGTTTCGAATCGAGACATT

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAKLVFKPIQIADIKDQVELAIPDKYRKFHRDEDAEEFEVDQEGNIIEQYQGPSIEEIEAELSRYREENEEQVRKLLEDA
RRKSEEIEEEGRKRAFQMIQDSKEKVKLEEDTGKAKAEQLLDRAKMEVERMIKEAEMKVAEIEHEAYLKGYDAGREVGFK
KGQGEVRRLIDRLGTIVGKAIDIREEIIQASEKQMVEMILIIARKVIKDEIIERKEIVLNNIREALKRIKDRDRVDIRVN
FADLELTTAHKDELIKLMESLRKVNIYEDSRVDRGGVIIETDVGAIDARISTQLKEIEEAIRNAEPI

Sequences:

>Translated_307_residues
MAKLVFKPIQIADIKDQVELAIPDKYRKFHRDEDAEEFEVDQEGNIIEQYQGPSIEEIEAELSRYREENEEQVRKLLEDA
RRKSEEIEEEGRKRAFQMIQDSKEKVKLEEDTGKAKAEQLLDRAKMEVERMIKEAEMKVAEIEHEAYLKGYDAGREVGFK
KGQGEVRRLIDRLGTIVGKAIDIREEIIQASEKQMVEMILIIARKVIKDEIIERKEIVLNNIREALKRIKDRDRVDIRVN
FADLELTTAHKDELIKLMESLRKVNIYEDSRVDRGGVIIETDVGAIDARISTQLKEIEEAIRNAEPI
>Mature_306_residues
AKLVFKPIQIADIKDQVELAIPDKYRKFHRDEDAEEFEVDQEGNIIEQYQGPSIEEIEAELSRYREENEEQVRKLLEDAR
RKSEEIEEEGRKRAFQMIQDSKEKVKLEEDTGKAKAEQLLDRAKMEVERMIKEAEMKVAEIEHEAYLKGYDAGREVGFKK
GQGEVRRLIDRLGTIVGKAIDIREEIIQASEKQMVEMILIIARKVIKDEIIERKEIVLNNIREALKRIKDRDRVDIRVNF
ADLELTTAHKDELIKLMESLRKVNIYEDSRVDRGGVIIETDVGAIDARISTQLKEIEEAIRNAEPI

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 35786; Mature: 35655

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLVFKPIQIADIKDQVELAIPDKYRKFHRDEDAEEFEVDQEGNIIEQYQGPSIEEIEA
CCCCCCCCCHHHCCHHHHHCCCCHHHHHHCCCCCHHHCCCCCCCCHHHHCCCCCHHHHHH
ELSRYREENEEQVRKLLEDARRKSEEIEEEGRKRAFQMIQDSKEKVKLEEDTGKAKAEQL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEECHHCCHHHHHHH
LDRAKMEVERMIKEAEMKVAEIEHEAYLKGYDAGREVGFKKGQGEVRRLIDRLGTIVGKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
IDIREEIIQASEKQMVEMILIIARKVIKDEIIERKEIVLNNIREALKRIKDRDRVDIRVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
FADLELTTAHKDELIKLMESLRKVNIYEDSRVDRGGVIIETDVGAIDARISTQLKEIEEA
EEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
IRNAEPI
HHCCCCC
>Mature Secondary Structure 
AKLVFKPIQIADIKDQVELAIPDKYRKFHRDEDAEEFEVDQEGNIIEQYQGPSIEEIEA
CCCCCCCCHHHCCHHHHHCCCCHHHHHHCCCCCHHHCCCCCCCCHHHHCCCCCHHHHHH
ELSRYREENEEQVRKLLEDARRKSEEIEEEGRKRAFQMIQDSKEKVKLEEDTGKAKAEQL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEECHHCCHHHHHHH
LDRAKMEVERMIKEAEMKVAEIEHEAYLKGYDAGREVGFKKGQGEVRRLIDRLGTIVGKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
IDIREEIIQASEKQMVEMILIIARKVIKDEIIERKEIVLNNIREALKRIKDRDRVDIRVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
FADLELTTAHKDELIKLMESLRKVNIYEDSRVDRGGVIIETDVGAIDARISTQLKEIEEA
EEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
IRNAEPI
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]