Click here to switch to the map view.

The map label for this gene is yiiX [H]

Identifier: 116327831

GI number: 116327831

Start: 1298048

End: 1298674

Strand: Reverse

Name: yiiX [H]

Synonym: LBL_1104

Alternate gene names: 116327831

Gene position: 1298674-1298048 (Counterclockwise)

Preceding gene: 116327832

Following gene: 116327830

Centisome position: 35.93

GC content: 33.65

Gene sequence:

>627_bases
ATGTATAAAAAATTAGGAATGCTCTTAATGTTTCTCGGTTCTTCGTGGATTGTCACGGAAGCAGAAAATTTAGGTAATCC
TAATATAGACGAAGGAGATATCATATTCCATGAATCAAATTCCGAACAAAGTAAAGCAATCCGATTAGCGACTCAATCGC
CTTATACTCATGCAGGTATTATCTTCAAATATGGAAACGAATATAAAGTTTTAGAAGCCGTAGAACCGGTAAAACTGACT
CCCCTTTCCGCTTTTATTAAGCGGGGGAAAAAGAATCATTATGTTATCAAACGCCTAAAAAATCGAGATAACATTCTCCC
GAAAAGTAAATTGGCCGAAATGAAAAGATACGGCGAATCTTTTTTAGGAAAACATTATGACATATACTTCGGGTGGTCTA
ATAATCGTATTTATTGTACCGAGTTGATTTGGAAATTATATAATAAAGCGACCGGAAAAAAACTAGGCGAGTTAAAAACA
TTAAAAGATTTTAATTTATCTTCTTTGCAAGTACAATCACTAATGAAAAAAAGATACGGAAATCATATTCCTTATTCAGA
GCCCGTAATTTCTCCGATTGACATGTTTGAATCTACGGAATTGGAAACAATTATAGATGCGAACTAA

Upstream 100 bases:

>100_bases
TCGGTCTTGCGATTTCGAGATCGTTTAACTCATTAATAGTTTCGTAGAATTCGTATTCCTATGTTAGACGTAATTACTCA
TTTTTTTAAGAAACTAACTC

Downstream 100 bases:

>100_bases
ATTTTTTAACTAGGATTTTTCCGCAGTTTTTTTTAAATCATAAGTTTTCGGAGTTCGATGATATGATAGAACATTATGCG
AAATATATTCAAGGAGTGTG

Product: putative peptidoglycan peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MYKKLGMLLMFLGSSWIVTEAENLGNPNIDEGDIIFHESNSEQSKAIRLATQSPYTHAGIIFKYGNEYKVLEAVEPVKLT
PLSAFIKRGKKNHYVIKRLKNRDNILPKSKLAEMKRYGESFLGKHYDIYFGWSNNRIYCTELIWKLYNKATGKKLGELKT
LKDFNLSSLQVQSLMKKRYGNHIPYSEPVISPIDMFESTELETIIDAN

Sequences:

>Translated_208_residues
MYKKLGMLLMFLGSSWIVTEAENLGNPNIDEGDIIFHESNSEQSKAIRLATQSPYTHAGIIFKYGNEYKVLEAVEPVKLT
PLSAFIKRGKKNHYVIKRLKNRDNILPKSKLAEMKRYGESFLGKHYDIYFGWSNNRIYCTELIWKLYNKATGKKLGELKT
LKDFNLSSLQVQSLMKKRYGNHIPYSEPVISPIDMFESTELETIIDAN
>Mature_208_residues
MYKKLGMLLMFLGSSWIVTEAENLGNPNIDEGDIIFHESNSEQSKAIRLATQSPYTHAGIIFKYGNEYKVLEAVEPVKLT
PLSAFIKRGKKNHYVIKRLKNRDNILPKSKLAEMKRYGESFLGKHYDIYFGWSNNRIYCTELIWKLYNKATGKKLGELKT
LKDFNLSSLQVQSLMKKRYGNHIPYSEPVISPIDMFESTELETIIDAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yebB [H]

Homologues:

Organism=Escherichia coli, GI1790372, Length=174, Percent_Identity=46.551724137931, Blast_Score=162, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23993; Mature: 23993

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKLGMLLMFLGSSWIVTEAENLGNPNIDEGDIIFHESNSEQSKAIRLATQSPYTHAGI
CCHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCEEEE
IFKYGNEYKVLEAVEPVKLTPLSAFIKRGKKNHYVIKRLKNRDNILPKSKLAEMKRYGES
EEEECCCEEEECCCCCCEECHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
FLGKHYDIYFGWSNNRIYCTELIWKLYNKATGKKLGELKTLKDFNLSSLQVQSLMKKRYG
HCCCCEEEEEEECCCEEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC
NHIPYSEPVISPIDMFESTELETIIDAN
CCCCCCCCCCCHHHHHCCCCCCEEECCC
>Mature Secondary Structure
MYKKLGMLLMFLGSSWIVTEAENLGNPNIDEGDIIFHESNSEQSKAIRLATQSPYTHAGI
CCHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCEEEE
IFKYGNEYKVLEAVEPVKLTPLSAFIKRGKKNHYVIKRLKNRDNILPKSKLAEMKRYGES
EEEECCCEEEECCCCCCEECHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
FLGKHYDIYFGWSNNRIYCTELIWKLYNKATGKKLGELKTLKDFNLSSLQVQSLMKKRYG
HCCCCEEEEEEECCCEEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC
NHIPYSEPVISPIDMFESTELETIIDAN
CCCCCCCCCCCHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503; 7868617 [H]