| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327809
Identifier: 116327809
GI number: 116327809
Start: 1259945
End: 1260514
Strand: Direct
Name: 116327809
Synonym: LBL_1074
Alternate gene names: NA
Gene position: 1259945-1260514 (Clockwise)
Preceding gene: 116327808
Following gene: 116327811
Centisome position: 34.86
GC content: 40.0
Gene sequence:
>570_bases ATGAATAACATTAATAGCAATCAGTTGTCATTAGAACAAAGCCGAGAACTATTCGAAATATTGGGAGCCCGTTTTGAGAA AAATATGAATCGCCATAAAGGATTTGATTGGCTTAAAATACAAACAAAACTAGAAACCAATGCTAAAAAACTGTGGTCTC TTAATAAAATGGAAAGAACAGGCGGCGAGCCGGATGTTGTGGGTTACGATAAAAAAATGGGCGAATATATTTTTTATGAT TGTTCAGCGGAAAGTCCTAAAGGTCGCAGAAGTGTTTGTTACGACGGCAAAGCATTGGAATCAAGGAAAGAACATAAACC CAAAGATAACGCTATTGATATGGCTTCTGCCATGGGTATTGAACTTTTAACGGAAGAACAGTATCGAGATTTACAGAAGC TTGGAAAGTTCGATACGAAAACTTCGGGTTGGGTGAAAACGCCTTCTGATATTAGAAGGCTTGGCGGGGCTATCTTTGCC GATTTCCGTTACGGACACGTCTTCGTGTATCACAACAGTGCAGAATCTTACTATGCCGTCAGAGCGTTTCGTGGTTCGCT CAAGATCTAA
Upstream 100 bases:
>100_bases TTTACTTGTGACAAAGAAAAATAGGGCACAATACACACGGATTCAAATAAATTTAAGCAGTGATCGCCTGATATATCATT AATGGAGGTCAAATAAAAGT
Downstream 100 bases:
>100_bases ATTTGATCCAAGTAAACTCGAACTGTGTCGGAAGTGAAATGAATATCAACTCAATAAGTGTTGAAACCATAATACGATTT TTTCTTTTCGCAATATGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNNINSNQLSLEQSRELFEILGARFEKNMNRHKGFDWLKIQTKLETNAKKLWSLNKMERTGGEPDVVGYDKKMGEYIFYD CSAESPKGRRSVCYDGKALESRKEHKPKDNAIDMASAMGIELLTEEQYRDLQKLGKFDTKTSGWVKTPSDIRRLGGAIFA DFRYGHVFVYHNSAESYYAVRAFRGSLKI
Sequences:
>Translated_189_residues MNNINSNQLSLEQSRELFEILGARFEKNMNRHKGFDWLKIQTKLETNAKKLWSLNKMERTGGEPDVVGYDKKMGEYIFYD CSAESPKGRRSVCYDGKALESRKEHKPKDNAIDMASAMGIELLTEEQYRDLQKLGKFDTKTSGWVKTPSDIRRLGGAIFA DFRYGHVFVYHNSAESYYAVRAFRGSLKI >Mature_189_residues MNNINSNQLSLEQSRELFEILGARFEKNMNRHKGFDWLKIQTKLETNAKKLWSLNKMERTGGEPDVVGYDKKMGEYIFYD CSAESPKGRRSVCYDGKALESRKEHKPKDNAIDMASAMGIELLTEEQYRDLQKLGKFDTKTSGWVKTPSDIRRLGGAIFA DFRYGHVFVYHNSAESYYAVRAFRGSLKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21796; Mature: 21796
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNINSNQLSLEQSRELFEILGARFEKNMNRHKGFDWLKIQTKLETNAKKLWSLNKMERT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHC GGEPDVVGYDKKMGEYIFYDCSAESPKGRRSVCYDGKALESRKEHKPKDNAIDMASAMGI CCCCCEECCCHHCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHHHCH ELLTEEQYRDLQKLGKFDTKTSGWVKTPSDIRRLGGAIFADFRYGHVFVYHNSAESYYAV HHCCHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHEEEECCCCEEEEEECCCCCCHHH RAFRGSLKI HHHHCCCCC >Mature Secondary Structure MNNINSNQLSLEQSRELFEILGARFEKNMNRHKGFDWLKIQTKLETNAKKLWSLNKMERT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHC GGEPDVVGYDKKMGEYIFYDCSAESPKGRRSVCYDGKALESRKEHKPKDNAIDMASAMGI CCCCCEECCCHHCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHHHCH ELLTEEQYRDLQKLGKFDTKTSGWVKTPSDIRRLGGAIFADFRYGHVFVYHNSAESYYAV HHCCHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHEEEECCCCEEEEEECCCCCCHHH RAFRGSLKI HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA