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The map label for this gene is prc-2 [H]

Identifier: 116327805

GI number: 116327805

Start: 1254298

End: 1255686

Strand: Reverse

Name: prc-2 [H]

Synonym: LBL_1069

Alternate gene names: 116327805

Gene position: 1255686-1254298 (Counterclockwise)

Preceding gene: 116327806

Following gene: 116327804

Centisome position: 34.74

GC content: 42.4

Gene sequence:

>1389_bases
ATGAAAAATAAAGAAAGAATGGTCTGGATTGGAATCGTTTCCTTTCTTAGTTTCGCGCTTCTTTTCCCTATTGGAACCGT
AAAGGGGATTTCCAAAGCTGGAGAATCTTATCTTCAAATTTTTCATGAAGTATTGTCAACCATTCATTCCGATTATGTGG
AATCTGTGGATGAGGAAAAGCTCTACCAAGGAGCGATTCGAGGACTTATCTCTTCTCTGGGAGATCCTCACTCCCGTTTT
ATGGACAAGGACGATTTTTCCCAACTCCAAGAGGAAACCCGAGGTAGTTTTGGCGGGCTGGGGATGGAGGTCTCTTTTGC
AGATGGAGCTATTGTAGTCATTTCTCCGATTGAAGACACACCCGCGATGAAAGCGGGGATTCTCCCTCAGGATAGAATCA
TAGAAATCGACGGAAAGAACACCCGTGATCTTTCTCTTTCCGATTCCATCAAATTGATGAGAGGAAAGGTAGGGACATCC
GTTTCGATTAAACTCGAAAGAAAAAATCAGAAAGAACCCATTCTTCTTACCTTAGTTAGGGAAATGATCAAGATCCGTTA
TGTTCGGTCTTTTTTCTTGGAGAAAGAAAAACTAGGTTATATCAAACTCAATCAGTTTATGGGAAAAGATAACACTCTTT
CCGAGTTTAAGAAGGAGCTGAATTCTCTCAAAGAAAAAGGCGCGGAAGGACTGATTCTGGATTTAAGAATGAATCCGGGC
GGACTTTTGGATCTGGCTATTGCTCTCTCCGACTTATTCTTAAAACCGGATTTAGACATCGTGTCTGTACGAGGAAGAGG
AGGGGAACTTGTTCGGGTTTTTCGTTCGACAGCCGCAAACGATAAAACCACGAATTTACCTTTAGTCGTTCTTATCAACG
AAGGTTCTGCGAGCGCTTCCGAAATTTTTGCAGGGGCCGTGCAGGATCATGGAAGGGGGAAGATTCTCGGGACGGTTTCT
TTCGGAAAAGGTTCCGTTCAAAATATCTATCCTCTTTCGCATAACACCGGAATTGCGCTTACGATCCAGAAGTATTATAC
TCCGAGCGGAAAGTCGATTCACGGAAAAGGAATACAACCTGACTTGATCGTAAAATCCATCGAGCCGACCGAAGACGATC
GTTTTTATATTCGCAAGATGGCCGAAAAGAAAATGCTCGAAAACTTTCTTGCAAAAAATCCGAATTACTCCGAAGCAAAT
TTTGCTCTTTTCGAAAAGTATCTTGCGGAAAAAGGGATCAGACTTTCCACAGATGTCGCCAGGTTTTTATACAAGAATAG
AGTCCGTCAAGAAGGACAGAATGTGATTCCGGATTTGGAACTTGATCCGCAACTTCGTAAGGCGATCGAAATTCTCAGTA
TTCCCAAAGACGGAGAAAAAAAATCTTAA

Upstream 100 bases:

>100_bases
TTTTTGGAAGCTTGTTCTGTCTACCGATTCGATCCGGATAGTGTATTAAAAAGTTTAAAATTGAAAAGCCCCGTTCTATA
TGAGGCATTGATCCAAGAAT

Downstream 100 bases:

>100_bases
CTTCATGATCGGAATGGGAATCGAAACCAGTTGCGACGAAACCTCCATCGGAATCATACGCGACGGGAAAGAATTACTCA
GCCTCGGAATTTTCAGCCAG

Product: C-terminal processing periplasmic-protease-3

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKNKERMVWIGIVSFLSFALLFPIGTVKGISKAGESYLQIFHEVLSTIHSDYVESVDEEKLYQGAIRGLISSLGDPHSRF
MDKDDFSQLQEETRGSFGGLGMEVSFADGAIVVISPIEDTPAMKAGILPQDRIIEIDGKNTRDLSLSDSIKLMRGKVGTS
VSIKLERKNQKEPILLTLVREMIKIRYVRSFFLEKEKLGYIKLNQFMGKDNTLSEFKKELNSLKEKGAEGLILDLRMNPG
GLLDLAIALSDLFLKPDLDIVSVRGRGGELVRVFRSTAANDKTTNLPLVVLINEGSASASEIFAGAVQDHGRGKILGTVS
FGKGSVQNIYPLSHNTGIALTIQKYYTPSGKSIHGKGIQPDLIVKSIEPTEDDRFYIRKMAEKKMLENFLAKNPNYSEAN
FALFEKYLAEKGIRLSTDVARFLYKNRVRQEGQNVIPDLELDPQLRKAIEILSIPKDGEKKS

Sequences:

>Translated_462_residues
MKNKERMVWIGIVSFLSFALLFPIGTVKGISKAGESYLQIFHEVLSTIHSDYVESVDEEKLYQGAIRGLISSLGDPHSRF
MDKDDFSQLQEETRGSFGGLGMEVSFADGAIVVISPIEDTPAMKAGILPQDRIIEIDGKNTRDLSLSDSIKLMRGKVGTS
VSIKLERKNQKEPILLTLVREMIKIRYVRSFFLEKEKLGYIKLNQFMGKDNTLSEFKKELNSLKEKGAEGLILDLRMNPG
GLLDLAIALSDLFLKPDLDIVSVRGRGGELVRVFRSTAANDKTTNLPLVVLINEGSASASEIFAGAVQDHGRGKILGTVS
FGKGSVQNIYPLSHNTGIALTIQKYYTPSGKSIHGKGIQPDLIVKSIEPTEDDRFYIRKMAEKKMLENFLAKNPNYSEAN
FALFEKYLAEKGIRLSTDVARFLYKNRVRQEGQNVIPDLELDPQLRKAIEILSIPKDGEKKS
>Mature_462_residues
MKNKERMVWIGIVSFLSFALLFPIGTVKGISKAGESYLQIFHEVLSTIHSDYVESVDEEKLYQGAIRGLISSLGDPHSRF
MDKDDFSQLQEETRGSFGGLGMEVSFADGAIVVISPIEDTPAMKAGILPQDRIIEIDGKNTRDLSLSDSIKLMRGKVGTS
VSIKLERKNQKEPILLTLVREMIKIRYVRSFFLEKEKLGYIKLNQFMGKDNTLSEFKKELNSLKEKGAEGLILDLRMNPG
GLLDLAIALSDLFLKPDLDIVSVRGRGGELVRVFRSTAANDKTTNLPLVVLINEGSASASEIFAGAVQDHGRGKILGTVS
FGKGSVQNIYPLSHNTGIALTIQKYYTPSGKSIHGKGIQPDLIVKSIEPTEDDRFYIRKMAEKKMLENFLAKNPNYSEAN
FALFEKYLAEKGIRLSTDVARFLYKNRVRQEGQNVIPDLELDPQLRKAIEILSIPKDGEKKS

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=317, Percent_Identity=32.1766561514196, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 51466; Mature: 51466

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKERMVWIGIVSFLSFALLFPIGTVKGISKAGESYLQIFHEVLSTIHSDYVESVDEEK
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LYQGAIRGLISSLGDPHSRFMDKDDFSQLQEETRGSFGGLGMEVSFADGAIVVISPIEDT
HHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCC
PAMKAGILPQDRIIEIDGKNTRDLSLSDSIKLMRGKVGTSVSIKLERKNQKEPILLTLVR
CCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH
EMIKIRYVRSFFLEKEKLGYIKLNQFMGKDNTLSEFKKELNSLKEKGAEGLILDLRMNPG
HHHHHHHHHHHHHHHHHCCEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCC
GLLDLAIALSDLFLKPDLDIVSVRGRGGELVRVFRSTAANDKTTNLPLVVLINEGSASAS
CHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHH
EIFAGAVQDHGRGKILGTVSFGKGSVQNIYPLSHNTGIALTIQKYYTPSGKSIHGKGIQP
HHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEEEECCCCCEECCCCCCC
DLIVKSIEPTEDDRFYIRKMAEKKMLENFLAKNPNYSEANFALFEKYLAEKGIRLSTDVA
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEHHHHH
RFLYKNRVRQEGQNVIPDLELDPQLRKAIEILSIPKDGEKKS
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKNKERMVWIGIVSFLSFALLFPIGTVKGISKAGESYLQIFHEVLSTIHSDYVESVDEEK
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LYQGAIRGLISSLGDPHSRFMDKDDFSQLQEETRGSFGGLGMEVSFADGAIVVISPIEDT
HHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCC
PAMKAGILPQDRIIEIDGKNTRDLSLSDSIKLMRGKVGTSVSIKLERKNQKEPILLTLVR
CCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH
EMIKIRYVRSFFLEKEKLGYIKLNQFMGKDNTLSEFKKELNSLKEKGAEGLILDLRMNPG
HHHHHHHHHHHHHHHHHCCEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCC
GLLDLAIALSDLFLKPDLDIVSVRGRGGELVRVFRSTAANDKTTNLPLVVLINEGSASAS
CHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHH
EIFAGAVQDHGRGKILGTVSFGKGSVQNIYPLSHNTGIALTIQKYYTPSGKSIHGKGIQP
HHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEEEECCCCCEECCCCCCC
DLIVKSIEPTEDDRFYIRKMAEKKMLENFLAKNPNYSEANFALFEKYLAEKGIRLSTDVA
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEHHHHH
RFLYKNRVRQEGQNVIPDLELDPQLRKAIEILSIPKDGEKKS
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]