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The map label for this gene is tnhA [H]

Identifier: 116327759

GI number: 116327759

Start: 1184810

End: 1185907

Strand: Direct

Name: tnhA [H]

Synonym: LBL_1016

Alternate gene names: 116327759

Gene position: 1184810-1185907 (Clockwise)

Preceding gene: 116327758

Following gene: 116327760

Centisome position: 32.78

GC content: 38.89

Gene sequence:

>1098_bases
ATGAAAAGAAAAGTATATGTAGGAATGGATGTCCACAAAGAAACGATCCAAATCGCGTATTTAACGAGCAATTCAAAGGA
AATATTGAAAGAACAACAGATAAAACACAATGAAGTTCAAATCAAAAAGTTCATCAAAAAACTAAAATTAGAATGGAATG
AAATACATTGTTACGAGGCAGGAGTAACCGGTTATCCACTTTACAGATATCTAAAGTCATTGGGAGTGAACTGTATCCTT
GTAGCGCCTGGAAAGATCCCAAGACAAAATACCGATAAGATCAAAACGGATAAAAGAGACGCGATCAAATTAGCGAGATT
AATGCGAAGTGGAGAATTGGAATCGATTCATGTTCCCAGTGAAGAGGACGAAGCAGTAAGAGATTATTTGAGATCCCGTG
ACAGTCTTCGTTTGGATTTAGGAAGGAATCGTCAAAGGTTGATGAAATTCTTATTAAGAAAAGACATAAAGTATTCCACA
ACGAAGTATTGGACGGTGAGTCATTACAAATGGTTGAACAATCTTCACTTTAACAACGAGATCCTTCAAGAGACGTTTAA
CGATTATTATAGTCGAGTGAGAGTTCAAGAAGAGAATTTAAAAGCGATGGATAAAAAGATACAAGAGATAGCGGAAAGTG
AACCGTATCGAGAGAAAGTGGGAATCTTAAGATGCTTTCGAGGAGTGGACTATTTAACGGCAATGTTCTTACTTTGTGAG
GTAAACGACTTCAAGCGATTCAAAACGGCCGGTTCGTTCATGAGTTTTCTTGGACTTGTTCCTGGAGAATATTCCAGCGG
TTCCAAAAGAAAACAAACAGGGATTACTAAAACTGGAAGTCCGAGACTTAGAAGGATTTTGACGGAAGCGGCTTGGCAAC
ATCGCTTCCCTGGAACAGGAAGTAAAATCATAACCGCACGTAGATCGGGACAACCTGCATTAGTCGTTGCTTTAGCGGAA
AAAGCTTCTCTCAGGTTACACAAGAAATTTCGCAATCTACAGAGGAAAAACTCCTCAAGTGATGATAACGGCAGTTTCAA
GAGAGTTATCCGGATTTCTTTGGGCGGCAATGAATCTTGTAGCCTAAAGTTAGAGTAA

Upstream 100 bases:

>100_bases
CGATAATACTTAGACAAAATGGCGCCCCTTCTGGGCTTGAAAAACGTGGGTTAGATGCGAGCATTTACCACAAAACAAAA
AAACCAACAGAAGGAACGCA

Downstream 100 bases:

>100_bases
TGTTCATCCAATAATTGAATTCGTTAGAGAAGATGTACGATAAAGGAGGAATACTTGTTGGCGAGAGTGTTGAAGCAAAT
TTGAATTTCAAATTTGACCT

Product: transposase IS1533

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKRKVYVGMDVHKETIQIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKLEWNEIHCYEAGVTGYPLYRYLKSLGVNCIL
VAPGKIPRQNTDKIKTDKRDAIKLARLMRSGELESIHVPSEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYST
TKYWTVSHYKWLNNLHFNNEILQETFNDYYSRVRVQEENLKAMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLCE
VNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTGSKIITARRSGQPALVVALAE
KASLRLHKKFRNLQRKNSSSDDNGSFKRVIRISLGGNESCSLKLE

Sequences:

>Translated_365_residues
MKRKVYVGMDVHKETIQIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKLEWNEIHCYEAGVTGYPLYRYLKSLGVNCIL
VAPGKIPRQNTDKIKTDKRDAIKLARLMRSGELESIHVPSEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYST
TKYWTVSHYKWLNNLHFNNEILQETFNDYYSRVRVQEENLKAMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLCE
VNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTGSKIITARRSGQPALVVALAE
KASLRLHKKFRNLQRKNSSSDDNGSFKRVIRISLGGNESCSLKLE
>Mature_365_residues
MKRKVYVGMDVHKETIQIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKLEWNEIHCYEAGVTGYPLYRYLKSLGVNCIL
VAPGKIPRQNTDKIKTDKRDAIKLARLMRSGELESIHVPSEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYST
TKYWTVSHYKWLNNLHFNNEILQETFNDYYSRVRVQEENLKAMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLCE
VNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTGSKIITARRSGQPALVVALAE
KASLRLHKKFRNLQRKNSSSDDNGSFKRVIRISLGGNESCSLKLE

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42437; Mature: 42437

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVYVGMDVHKETIQIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKLEWNEIHCYEA
CCCEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
GVTGYPLYRYLKSLGVNCILVAPGKIPRQNTDKIKTDKRDAIKLARLMRSGELESIHVPS
CCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCC
EEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYSTTKYWTVSHYKWLNNLHFNNE
CCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCHH
ILQETFNDYYSRVRVQEENLKAMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLCE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTG
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
SKIITARRSGQPALVVALAEKASLRLHKKFRNLQRKNSSSDDNGSFKRVIRISLGGNESC
CEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCE
SLKLE
EEEEC
>Mature Secondary Structure
MKRKVYVGMDVHKETIQIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKLEWNEIHCYEA
CCCEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
GVTGYPLYRYLKSLGVNCILVAPGKIPRQNTDKIKTDKRDAIKLARLMRSGELESIHVPS
CCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCC
EEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYSTTKYWTVSHYKWLNNLHFNNE
CCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCHH
ILQETFNDYYSRVRVQEENLKAMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLCE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTG
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
SKIITARRSGQPALVVALAEKASLRLHKKFRNLQRKNSSSDDNGSFKRVIRISLGGNESC
CEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCE
SLKLE
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8171119 [H]