| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327722
Identifier: 116327722
GI number: 116327722
Start: 1136031
End: 1138709
Strand: Reverse
Name: 116327722
Synonym: LBL_0975
Alternate gene names: NA
Gene position: 1138709-1136031 (Counterclockwise)
Preceding gene: 116327723
Following gene: 116327721
Centisome position: 31.5
GC content: 44.94
Gene sequence:
>2679_bases ATGTTAGAATCAAAAAGAAAGTCTATCATTCCTTTGATTTACAAAGGAATGAGGATTTTAAAGTTAAGTGTGGATCGAAT CATTGCATCGATATGCAGCCAATCCGTCTCAAGCGCGGGTTGGATGAGTAGATCCCGTAAACAGTTTCAAGAACAAAACC GAGGTCCCAAATATCAAAAAGTACATTCCATCTTTTTTATATGGATTACGGTTTTGCTGATCGGATGCAGTGGAGAAAAT TCCAATCCTGGAATGGGGGCGATCTCCATGGGAAGTATAAAAGATTCCTTTTTGAATCTAATACACTCTCATTCATCAAA CCAGAGTTTGATTCCTTCCAGTGGATTGTATGTGTTTGTTTCCAGTTATACGAACAATGCTTCCGTTCCGCCGCTTTCGC ACAACGGTAGTTTCGGAGGTGTAGCCGGCGCGGATGCGTATTGTAATTCTCATATTCCGTCGAGTCTGACCGGAACCGGA TCTTATAAGGCGATGCTCGTGGACGGAACCAATCGTATCGCCACGACGGTGGGGGCGACTTCTTCCAGCGGTCAAAAGGA TTGGGTATTTGAAAAGAATACATCTTATTACAGAACCGATGGGAATCTCGTGTTCATTACGAACGACGCAGGGTTGTTCG ACTTTTCGAATGGAAGTCTAACGTATTCGTTTACGGACGTTTTTTCCATCTATGATTTCGGAATTTGGACCGGACTTCAA TCCGACTGGAAAACCGTCACTTCCACACAACTTTGTTCCTCCGCATCCCAACCTTGGACGAGCGGAAGCGTAGCCAATCA AGGTAAGTTTAGATATGCGAATCACAAAAACGCATCTTCTATTTCCGCAGGTTCGATCCCTTGTCAATGGACTTCAACGG AAGATCCAGAAGACCCACAAGCCACTGTGGAAATGGGAGTTCTATGCGTGCAGGAAAAACCGATCACACTCAAGGGAAAA ATCGGGTTTTTGGAAGACGAACAATGTCACCATTCAAATTCTTTTTTTACGATTCCTTGGAAACAATGCCACGAATTCAA ACGCCACTTTGATCCTGTAAGCGGCGCCGCAATTTCCAGTGATGTTCCTAGGCCCGGAAGTTACAGACCGGTTCCGGGTC AGGTCCATTTGAATTTCTTCAACAGTTCCCAGACAAATCCTGTGGGATGTTATATCTCCAATTTGCAAAGCGACTTAGAC GGAAATGTAAGTGGACAGGTTGACAACTGTCTTAAGTCAAACCCCGCTCCGGATAAAGTTCGCATCACTCTCGTGCTGGA TTACAAAACAAATCTTGCATATAACAATTCGATCGGAACGATTCGGAGTGTTTGGGAAAAAACAAGAATCTCTGCTCTCA ATTACTTGCCGTATGACCAGAGTAAATTCTTCCAAACTCTCTTTGTGGAACCGAATACGGATCAGGCTATGGTGGAACCT TATTTCGAAGTGGTGCTGCCTTTGAGCTCGTATTGGAATGCGGCAACAAAAACGTACGAGTTGGGTACGGTGAATCTTTT AGACTCCGTACCCAAGAACATGGCGAGCAGCATGCGAATGACTCTGTCGAGTTGGCAAGGTACGGTGGAATTCCAGAATC GATTGAAAAACGAATCGGTGGATAAGATTCAATTCGATATGTTTCTCAACGATTCTACTCGTAATTGTGTCCGTTGCTAC ACAATCAATTTTGTCGGCACGCAGGGTACAGATGCATATGCGGGAAATCTTATTCTCACCGTGCCGCATGCGAATAATTC TCCAACTATCTATCCTGTTGACAATCCGCTAGGTCGTGAATTCGGTCATACTGTGACATTCTCTGCAGCTCCCTGGTTAA TTCCTGCTCCCGTGCATTGGGCCGGACAATTTAGGAATTCCAGCAACCAAAACTATGCGCGCACAGATCATGGTATCGAA TATCAAGACATGAGAACCGCATTGTTTGAGGGTATCGCGAATCCGATCGGCAGATATTTGATCAGTGGGAATCAAGGAAA CTGGATATCGGATCGATATTTTCTAGGCACGGATCAAAACGGCTGGCAATTAAACCCGATCGTTGATCAGCAATATTCCG ATTATCAGAGATTTCGATATGAGATGTGGGCCCGAGGAATCGTGGAAAACTCTCCGGAATGGACGTCTCGATTACAGAGG ATTTCAAGTGTTGGTTCTAGTTTTACTAATTACTTCACGAATTCGAATAACGAATTTCGCTACGACGGTTTCGTGCATTA TCTGTTGCAAACCGCTCCGTATCATATCGATAGTTACACGGCCACCGGAGTAATTGCGCCTTACCTGTCTCAGGTGGAAT ATCGATACGACCAGATGAAGTTGCTGGGAGAAATTTTGGACGGAGGACCGGCTAATTTCAAATGGGTTTCTTATGGAGAC GTGGTTCATCCTAAAAACTCTCGAGTGAGTTTGAAAGATTTGCTGGTTACTTTGGGCGAGATGCACGACGGCTCTCCGCT TCCACAAAATGGCAGTCCCGGGTTTACGGATGCGTATCTTTCCATTAAAAGTCCGTTTTCTCCCCAGTCTCTCGGATGGA GACTCGTGCAAAAGGGACTCATCTCGAAAGACGAAGTAAACAACTTATATCGAGCCGTGGGAATGGACCAACTCGCAAAT ATCTGCGGTTATCCATGGGCTCTTCCGAACTGTCAATGA
Upstream 100 bases:
>100_bases CGTTAAAAAACAAATATTTCATTCTGAAACCCACCCTGAAATGTCCGGAGAGCATGTTATTTTACCTGTTCTTAACCTTG TTAAGAATTAGGAGAATTCA
Downstream 100 bases:
>100_bases GGTAAGACGATCGGATAGAATTTTCACAATTGGGAACTAATTCACTTAATAAAAGTTAGGTGAATTAGTGTACTCATTTG TATCTAGAAATTTGTAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 892; Mature: 892
Protein sequence:
>892_residues MLESKRKSIIPLIYKGMRILKLSVDRIIASICSQSVSSAGWMSRSRKQFQEQNRGPKYQKVHSIFFIWITVLLIGCSGEN SNPGMGAISMGSIKDSFLNLIHSHSSNQSLIPSSGLYVFVSSYTNNASVPPLSHNGSFGGVAGADAYCNSHIPSSLTGTG SYKAMLVDGTNRIATTVGATSSSGQKDWVFEKNTSYYRTDGNLVFITNDAGLFDFSNGSLTYSFTDVFSIYDFGIWTGLQ SDWKTVTSTQLCSSASQPWTSGSVANQGKFRYANHKNASSISAGSIPCQWTSTEDPEDPQATVEMGVLCVQEKPITLKGK IGFLEDEQCHHSNSFFTIPWKQCHEFKRHFDPVSGAAISSDVPRPGSYRPVPGQVHLNFFNSSQTNPVGCYISNLQSDLD GNVSGQVDNCLKSNPAPDKVRITLVLDYKTNLAYNNSIGTIRSVWEKTRISALNYLPYDQSKFFQTLFVEPNTDQAMVEP YFEVVLPLSSYWNAATKTYELGTVNLLDSVPKNMASSMRMTLSSWQGTVEFQNRLKNESVDKIQFDMFLNDSTRNCVRCY TINFVGTQGTDAYAGNLILTVPHANNSPTIYPVDNPLGREFGHTVTFSAAPWLIPAPVHWAGQFRNSSNQNYARTDHGIE YQDMRTALFEGIANPIGRYLISGNQGNWISDRYFLGTDQNGWQLNPIVDQQYSDYQRFRYEMWARGIVENSPEWTSRLQR ISSVGSSFTNYFTNSNNEFRYDGFVHYLLQTAPYHIDSYTATGVIAPYLSQVEYRYDQMKLLGEILDGGPANFKWVSYGD VVHPKNSRVSLKDLLVTLGEMHDGSPLPQNGSPGFTDAYLSIKSPFSPQSLGWRLVQKGLISKDEVNNLYRAVGMDQLAN ICGYPWALPNCQ
Sequences:
>Translated_892_residues MLESKRKSIIPLIYKGMRILKLSVDRIIASICSQSVSSAGWMSRSRKQFQEQNRGPKYQKVHSIFFIWITVLLIGCSGEN SNPGMGAISMGSIKDSFLNLIHSHSSNQSLIPSSGLYVFVSSYTNNASVPPLSHNGSFGGVAGADAYCNSHIPSSLTGTG SYKAMLVDGTNRIATTVGATSSSGQKDWVFEKNTSYYRTDGNLVFITNDAGLFDFSNGSLTYSFTDVFSIYDFGIWTGLQ SDWKTVTSTQLCSSASQPWTSGSVANQGKFRYANHKNASSISAGSIPCQWTSTEDPEDPQATVEMGVLCVQEKPITLKGK IGFLEDEQCHHSNSFFTIPWKQCHEFKRHFDPVSGAAISSDVPRPGSYRPVPGQVHLNFFNSSQTNPVGCYISNLQSDLD GNVSGQVDNCLKSNPAPDKVRITLVLDYKTNLAYNNSIGTIRSVWEKTRISALNYLPYDQSKFFQTLFVEPNTDQAMVEP YFEVVLPLSSYWNAATKTYELGTVNLLDSVPKNMASSMRMTLSSWQGTVEFQNRLKNESVDKIQFDMFLNDSTRNCVRCY TINFVGTQGTDAYAGNLILTVPHANNSPTIYPVDNPLGREFGHTVTFSAAPWLIPAPVHWAGQFRNSSNQNYARTDHGIE YQDMRTALFEGIANPIGRYLISGNQGNWISDRYFLGTDQNGWQLNPIVDQQYSDYQRFRYEMWARGIVENSPEWTSRLQR ISSVGSSFTNYFTNSNNEFRYDGFVHYLLQTAPYHIDSYTATGVIAPYLSQVEYRYDQMKLLGEILDGGPANFKWVSYGD VVHPKNSRVSLKDLLVTLGEMHDGSPLPQNGSPGFTDAYLSIKSPFSPQSLGWRLVQKGLISKDEVNNLYRAVGMDQLAN ICGYPWALPNCQ >Mature_892_residues MLESKRKSIIPLIYKGMRILKLSVDRIIASICSQSVSSAGWMSRSRKQFQEQNRGPKYQKVHSIFFIWITVLLIGCSGEN SNPGMGAISMGSIKDSFLNLIHSHSSNQSLIPSSGLYVFVSSYTNNASVPPLSHNGSFGGVAGADAYCNSHIPSSLTGTG SYKAMLVDGTNRIATTVGATSSSGQKDWVFEKNTSYYRTDGNLVFITNDAGLFDFSNGSLTYSFTDVFSIYDFGIWTGLQ SDWKTVTSTQLCSSASQPWTSGSVANQGKFRYANHKNASSISAGSIPCQWTSTEDPEDPQATVEMGVLCVQEKPITLKGK IGFLEDEQCHHSNSFFTIPWKQCHEFKRHFDPVSGAAISSDVPRPGSYRPVPGQVHLNFFNSSQTNPVGCYISNLQSDLD GNVSGQVDNCLKSNPAPDKVRITLVLDYKTNLAYNNSIGTIRSVWEKTRISALNYLPYDQSKFFQTLFVEPNTDQAMVEP YFEVVLPLSSYWNAATKTYELGTVNLLDSVPKNMASSMRMTLSSWQGTVEFQNRLKNESVDKIQFDMFLNDSTRNCVRCY TINFVGTQGTDAYAGNLILTVPHANNSPTIYPVDNPLGREFGHTVTFSAAPWLIPAPVHWAGQFRNSSNQNYARTDHGIE YQDMRTALFEGIANPIGRYLISGNQGNWISDRYFLGTDQNGWQLNPIVDQQYSDYQRFRYEMWARGIVENSPEWTSRLQR ISSVGSSFTNYFTNSNNEFRYDGFVHYLLQTAPYHIDSYTATGVIAPYLSQVEYRYDQMKLLGEILDGGPANFKWVSYGD VVHPKNSRVSLKDLLVTLGEMHDGSPLPQNGSPGFTDAYLSIKSPFSPQSLGWRLVQKGLISKDEVNNLYRAVGMDQLAN ICGYPWALPNCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99379; Mature: 99379
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESKRKSIIPLIYKGMRILKLSVDRIIASICSQSVSSAGWMSRSRKQFQEQNRGPKYQK CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VHSIFFIWITVLLIGCSGENSNPGMGAISMGSIKDSFLNLIHSHSSNQSLIPSSGLYVFV HHHHHHHHHHHHHEECCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEE SSYTNNASVPPLSHNGSFGGVAGADAYCNSHIPSSLTGTGSYKAMLVDGTNRIATTVGAT EECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEECCC SSSGQKDWVFEKNTSYYRTDGNLVFITNDAGLFDFSNGSLTYSFTDVFSIYDFGIWTGLQ CCCCCCCEEEECCCCEEEECCEEEEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHCCCC SDWKTVTSTQLCSSASQPWTSGSVANQGKFRYANHKNASSISAGSIPCQWTSTEDPEDPQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCH ATVEMGVLCVQEKPITLKGKIGFLEDEQCHHSNSFFTIPWKQCHEFKRHFDPVSGAAISS HHHEECEEEECCCCEEEEECCCCCCCCHHCCCCCEEECCHHHHHHHHHHCCCCCCCCCCC DVPRPGSYRPVPGQVHLNFFNSSQTNPVGCYISNLQSDLDGNVSGQVDNCLKSNPAPDKV CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEHHHHHHCCCCCCCCCHHHHHHCCCCCCEE RITLVLDYKTNLAYNNSIGTIRSVWEKTRISALNYLPYDQSKFFQTLFVEPNTDQAMVEP EEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCHHHHHH YFEVVLPLSSYWNAATKTYELGTVNLLDSVPKNMASSMRMTLSSWQGTVEFQNRLKNESV HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC DKIQFDMFLNDSTRNCVRCYTINFVGTQGTDAYAGNLILTVPHANNSPTIYPVDNPLGRE CEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCHH FGHTVTFSAAPWLIPAPVHWAGQFRNSSNQNYARTDHGIEYQDMRTALFEGIANPIGRYL HCCEEEECCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE ISGNQGNWISDRYFLGTDQNGWQLNPIVDQQYSDYQRFRYEMWARGIVENSPEWTSRLQR EECCCCCEECCEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ISSVGSSFTNYFTNSNNEFRYDGFVHYLLQTAPYHIDSYTATGVIAPYLSQVEYRYDQMK HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LLGEILDGGPANFKWVSYGDVVHPKNSRVSLKDLLVTLGEMHDGSPLPQNGSPGFTDAYL HHHHHHCCCCCCEEEEEECCEECCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE SIKSPFSPQSLGWRLVQKGLISKDEVNNLYRAVGMDQLANICGYPWALPNCQ EECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLESKRKSIIPLIYKGMRILKLSVDRIIASICSQSVSSAGWMSRSRKQFQEQNRGPKYQK CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VHSIFFIWITVLLIGCSGENSNPGMGAISMGSIKDSFLNLIHSHSSNQSLIPSSGLYVFV HHHHHHHHHHHHHEECCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEE SSYTNNASVPPLSHNGSFGGVAGADAYCNSHIPSSLTGTGSYKAMLVDGTNRIATTVGAT EECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEECCC SSSGQKDWVFEKNTSYYRTDGNLVFITNDAGLFDFSNGSLTYSFTDVFSIYDFGIWTGLQ CCCCCCCEEEECCCCEEEECCEEEEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHCCCC SDWKTVTSTQLCSSASQPWTSGSVANQGKFRYANHKNASSISAGSIPCQWTSTEDPEDPQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCH ATVEMGVLCVQEKPITLKGKIGFLEDEQCHHSNSFFTIPWKQCHEFKRHFDPVSGAAISS HHHEECEEEECCCCEEEEECCCCCCCCHHCCCCCEEECCHHHHHHHHHHCCCCCCCCCCC DVPRPGSYRPVPGQVHLNFFNSSQTNPVGCYISNLQSDLDGNVSGQVDNCLKSNPAPDKV CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEHHHHHHCCCCCCCCCHHHHHHCCCCCCEE RITLVLDYKTNLAYNNSIGTIRSVWEKTRISALNYLPYDQSKFFQTLFVEPNTDQAMVEP EEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCHHHHHH YFEVVLPLSSYWNAATKTYELGTVNLLDSVPKNMASSMRMTLSSWQGTVEFQNRLKNESV HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC DKIQFDMFLNDSTRNCVRCYTINFVGTQGTDAYAGNLILTVPHANNSPTIYPVDNPLGRE CEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCHH FGHTVTFSAAPWLIPAPVHWAGQFRNSSNQNYARTDHGIEYQDMRTALFEGIANPIGRYL HCCEEEECCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE ISGNQGNWISDRYFLGTDQNGWQLNPIVDQQYSDYQRFRYEMWARGIVENSPEWTSRLQR EECCCCCEECCEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ISSVGSSFTNYFTNSNNEFRYDGFVHYLLQTAPYHIDSYTATGVIAPYLSQVEYRYDQMK HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LLGEILDGGPANFKWVSYGDVVHPKNSRVSLKDLLVTLGEMHDGSPLPQNGSPGFTDAYL HHHHHHCCCCCCEEEEEECCEECCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE SIKSPFSPQSLGWRLVQKGLISKDEVNNLYRAVGMDQLANICGYPWALPNCQ EECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA