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The map label for this gene is yhhW [C]

Identifier: 116327636

GI number: 116327636

Start: 1017932

End: 1018789

Strand: Direct

Name: yhhW [C]

Synonym: LBL_0873

Alternate gene names: 116327636

Gene position: 1017932-1018789 (Clockwise)

Preceding gene: 116327635

Following gene: 116327639

Centisome position: 28.16

GC content: 47.9

Gene sequence:

>858_bases
ATGAAAATCATTTCTGCGGTTATAAAAGAACTCGGAGACAATTTCCGAGTTCGGAGAATTCTTCCGTCGATCGAAGCGCG
TCACGTTGGCCCGTTCGTATTTGTGGATCATATGGGACCTGTTCCGATTCAAACCGGAAAAGAGCTGACGGTACGTTCTC
ATCCACATATTGGACTCGCTACAATCACGTATCTCTATGACGGAGTGATTTTACATAGAGACAGCATCGGATCGGAGATG
CCCATTCGTCCTTATGAAGTGAATTGGATGACTGCAGGCTCGGGGATCGCACACAGCGAACGCTCTCAATTGGATTCTCA
GTATTCTATTTTGGAAGGAATACAAACTTGGGTTGCACTTCCCAAAGAATCGGAAGAAGTGAGCGCGGAATTTTTTCATC
TGGATCAAAAAGACATTCCGGTTATCGAGGGAGAGAGTTGGGAGCTTCGACTTATTGCGGGAGAATTCTTAGGAAAACGT
TCGCCGGTAAAAGTGTATTCTTCTCTTTTTTACGCCGACTTGAATGTGGAGCCTGGAGCCAAGGGGGAATGGAATATCCC
GGGCGATCAAGAATCTGCGTTGTATGTCGCACGCGGAAGTTTGGAGATACGAGATCAAAAGATTCAAGTCGGCCAAATGG
CCGTATTTAATTCGGGAGAAACGATCGCGTTTTCTTCCACGGAAGGAAGCCGCACGATCCTGATGGGAGGGGTTCCGTTT
CCCGAACCGCGTCATCTTTGGTGGAATTTCGTATCCACTTCCTTGGAACGAATCGAAAAGGCGAAACTCGAATGGAAGGA
GGAGCGTTTTCCTAAGGTCCCGGGTGAAACGGAGAGGATCCCTTTGCCCGAGGGATAA

Upstream 100 bases:

>100_bases
CACGGAAAAAATCCGGGGTAATAGAGAATTTTCTCAGAGGAACGAGAGTTTTCTATTCAAAAATCTTGAAATCCAAAACA
ATCAAACTAAACTTTAAACT

Downstream 100 bases:

>100_bases
ATTAGAAATTCATTTTATAAAGATTTCCTAAAACTAAAATTTACAGTAAAAAAATGAATCGAAAAATTCAATTTTTCAAC
CTATCCATTTTATAGAGTTC

Product: Pirin-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKIISAVIKELGDNFRVRRILPSIEARHVGPFVFVDHMGPVPIQTGKELTVRSHPHIGLATITYLYDGVILHRDSIGSEM
PIRPYEVNWMTAGSGIAHSERSQLDSQYSILEGIQTWVALPKESEEVSAEFFHLDQKDIPVIEGESWELRLIAGEFLGKR
SPVKVYSSLFYADLNVEPGAKGEWNIPGDQESALYVARGSLEIRDQKIQVGQMAVFNSGETIAFSSTEGSRTILMGGVPF
PEPRHLWWNFVSTSLERIEKAKLEWKEERFPKVPGETERIPLPEG

Sequences:

>Translated_285_residues
MKIISAVIKELGDNFRVRRILPSIEARHVGPFVFVDHMGPVPIQTGKELTVRSHPHIGLATITYLYDGVILHRDSIGSEM
PIRPYEVNWMTAGSGIAHSERSQLDSQYSILEGIQTWVALPKESEEVSAEFFHLDQKDIPVIEGESWELRLIAGEFLGKR
SPVKVYSSLFYADLNVEPGAKGEWNIPGDQESALYVARGSLEIRDQKIQVGQMAVFNSGETIAFSSTEGSRTILMGGVPF
PEPRHLWWNFVSTSLERIEKAKLEWKEERFPKVPGETERIPLPEG
>Mature_285_residues
MKIISAVIKELGDNFRVRRILPSIEARHVGPFVFVDHMGPVPIQTGKELTVRSHPHIGLATITYLYDGVILHRDSIGSEM
PIRPYEVNWMTAGSGIAHSERSQLDSQYSILEGIQTWVALPKESEEVSAEFFHLDQKDIPVIEGESWELRLIAGEFLGKR
SPVKVYSSLFYADLNVEPGAKGEWNIPGDQESALYVARGSLEIRDQKIQVGQMAVFNSGETIAFSSTEGSRTILMGGVPF
PEPRHLWWNFVSTSLERIEKAKLEWKEERFPKVPGETERIPLPEG

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=261, Percent_Identity=29.1187739463602, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI4505823, Length=261, Percent_Identity=29.1187739463602, Blast_Score=110, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 32068; Mature: 32068

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIISAVIKELGDNFRVRRILPSIEARHVGPFVFVDHMGPVPIQTGKELTVRSHPHIGLA
CHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCHHH
TITYLYDGVILHRDSIGSEMPIRPYEVNWMTAGSGIAHSERSQLDSQYSILEGIQTWVAL
HHHHHHCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PKESEEVSAEFFHLDQKDIPVIEGESWELRLIAGEFLGKRSPVKVYSSLFYADLNVEPGA
CCCCHHHHHHHEECCCCCCCEEECCCEEEEEEEHHHHCCCCCHHHHHHEEEEECCCCCCC
KGEWNIPGDQESALYVARGSLEIRDQKIQVGQMAVFNSGETIAFSSTEGSRTILMGGVPF
CCCCCCCCCCCCEEEEEECCEEEECCEEEECEEEEECCCCEEEEECCCCCEEEEECCCCC
PEPRHLWWNFVSTSLERIEKAKLEWKEERFPKVPGETERIPLPEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIISAVIKELGDNFRVRRILPSIEARHVGPFVFVDHMGPVPIQTGKELTVRSHPHIGLA
CHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCHHH
TITYLYDGVILHRDSIGSEMPIRPYEVNWMTAGSGIAHSERSQLDSQYSILEGIQTWVAL
HHHHHHCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PKESEEVSAEFFHLDQKDIPVIEGESWELRLIAGEFLGKRSPVKVYSSLFYADLNVEPGA
CCCCHHHHHHHEECCCCCCCEEECCCEEEEEEEHHHHCCCCCHHHHHHEEEEECCCCCCC
KGEWNIPGDQESALYVARGSLEIRDQKIQVGQMAVFNSGETIAFSSTEGSRTILMGGVPF
CCCCCCCCCCCCEEEEEECCEEEECCEEEECEEEEECCCCEEEEECCCCCEEEEECCCCC
PEPRHLWWNFVSTSLERIEKAKLEWKEERFPKVPGETERIPLPEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]