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The map label for this gene is tnhA [H]

Identifier: 116327632

GI number: 116327632

Start: 1006982

End: 1008076

Strand: Direct

Name: tnhA [H]

Synonym: LBL_0865

Alternate gene names: 116327632

Gene position: 1006982-1008076 (Clockwise)

Preceding gene: 116327631

Following gene: 116327635

Centisome position: 27.86

GC content: 39.45

Gene sequence:

>1095_bases
ATGAAAAGAAAAGTATATGTAGGAATGGATGTCCACAAAGAAACGATCAGAATCGCGTATTTAACGAGCAATTCAAAGGA
AATATTGAAAGAACAACAGATAAAACACAATGAAGTTCAAATCAAAAAGTTCATCAAAAAACTCAAAACAGAATGGAATG
AAATACATTGTTGTTACGAAGCGGGAGTAACCGGTTATCCACTTTACAGATATCTAAAGTCATTGGGAGTGAACTGTATC
CTTGTAGCGCCCGGAAAGATCCCAAGACAAAATACCGGTAAGATCAAAACGGATAAAAGAGACGCGATCAAATTAGCGAG
ATTAATGCGAAGTAGAGAATTGGAATCGATTCATGTTCCCAGTGAAGAGGACGAAGCAGTAAGAGATTATTTGAGATCCC
GTGACAGTCTTCGTTTGGATTTAGGAAGGAATCGTCAAAGGTTGATGAAATTCTTATTAAGAAAAGACATAAAGTATTCC
ACAACGAAGTATTGGACGGTGAGTCATTACAAATGGTTGAACAATCTTCACTTTAACAACGAGATCCTTCAAGAGACGTT
TAACGATTATTATAGTCGAGTGAGAGTTCAAGAAGAGAATCTAAAATCCATGGATAAAAAGATACAAGAGATAGCGGAAA
GTGAACCGTATCGAGAGAAAGTGGGAATCTTAAGATGCTTTCGAGGAGTGGACTATTTAACGGCAATGTTCTTACTTTGT
GAGGTAAACGACTTCAAGCGATTCAAAACGGCCGGTTCGTTCATGAGTTTTCTTGGACTTGTTCCTGGAGAATATTCCAG
CGGTTCCAAAAGAAAACAAACAGGGATTACTAAAACTGGAAGTCCGAGACTTAGAAGGATTTTGACGGAAGCGGCTTGGC
AACATCGCTTCCCTGGAACAGGAAGTAAAATCGTAACCGCACGTAGATCGGGACAACCTGCGTTAGTCGTTGCTTTAGCG
GAAAAAGCTTCTCTCAGGTTACACAAGAAATTTCGCAATCTACAGCTAAGAGGAAAAACTCCTCAAGTGATGATAACGGC
AGTTTCAAGAGAGTTATCCGGATTTCTTTGGGCGGCAATGAATCTTGTAGCCTAA

Upstream 100 bases:

>100_bases
TTTTTTAATTTAGACAAAATGGCGCCCCTTCTGGGCTTGAAAAACGTGGGTTATATGCGAGCATTTACCACAAAACAAAA
AAACCAACAGAAGGAACGCA

Downstream 100 bases:

>100_bases
AGTTAGAGTAATGTTCATCCAATAATTGAATTCGTTAGAGAAGATGTACGATAAAGGAGGAATACTTGTTGGCGAGAGTG
TTGAAGCAAATTTGAATTTC

Product: transposase IS1533

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKRKVYVGMDVHKETIRIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKTEWNEIHCCYEAGVTGYPLYRYLKSLGVNCI
LVAPGKIPRQNTGKIKTDKRDAIKLARLMRSRELESIHVPSEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYS
TTKYWTVSHYKWLNNLHFNNEILQETFNDYYSRVRVQEENLKSMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLC
EVNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTGSKIVTARRSGQPALVVALA
EKASLRLHKKFRNLQLRGKTPQVMITAVSRELSGFLWAAMNLVA

Sequences:

>Translated_364_residues
MKRKVYVGMDVHKETIRIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKTEWNEIHCCYEAGVTGYPLYRYLKSLGVNCI
LVAPGKIPRQNTGKIKTDKRDAIKLARLMRSRELESIHVPSEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYS
TTKYWTVSHYKWLNNLHFNNEILQETFNDYYSRVRVQEENLKSMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLC
EVNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTGSKIVTARRSGQPALVVALA
EKASLRLHKKFRNLQLRGKTPQVMITAVSRELSGFLWAAMNLVA
>Mature_364_residues
MKRKVYVGMDVHKETIRIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKTEWNEIHCCYEAGVTGYPLYRYLKSLGVNCI
LVAPGKIPRQNTGKIKTDKRDAIKLARLMRSRELESIHVPSEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYS
TTKYWTVSHYKWLNNLHFNNEILQETFNDYYSRVRVQEENLKSMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLC
EVNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGTGSKIVTARRSGQPALVVALA
EKASLRLHKKFRNLQLRGKTPQVMITAVSRELSGFLWAAMNLVA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42362; Mature: 42362

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVYVGMDVHKETIRIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKTEWNEIHCCYE
CCCEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHH
AGVTGYPLYRYLKSLGVNCILVAPGKIPRQNTGKIKTDKRDAIKLARLMRSRELESIHVP
CCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCC
SEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYSTTKYWTVSHYKWLNNLHFNN
CCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCCH
EILQETFNDYYSRVRVQEENLKSMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EVNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
GSKIVTARRSGQPALVVALAEKASLRLHKKFRNLQLRGKTPQVMITAVSRELSGFLWAAM
CCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCEECCCCCCEEHHHHHHHHHHHHHHHH
NLVA
HHCC
>Mature Secondary Structure
MKRKVYVGMDVHKETIRIAYLTSNSKEILKEQQIKHNEVQIKKFIKKLKTEWNEIHCCYE
CCCEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHH
AGVTGYPLYRYLKSLGVNCILVAPGKIPRQNTGKIKTDKRDAIKLARLMRSRELESIHVP
CCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCC
SEEDEAVRDYLRSRDSLRLDLGRNRQRLMKFLLRKDIKYSTTKYWTVSHYKWLNNLHFNN
CCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCCH
EILQETFNDYYSRVRVQEENLKSMDKKIQEIAESEPYREKVGILRCFRGVDYLTAMFLLC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EVNDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRLRRILTEAAWQHRFPGT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
GSKIVTARRSGQPALVVALAEKASLRLHKKFRNLQLRGKTPQVMITAVSRELSGFLWAAM
CCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCEECCCCCCEEHHHHHHHHHHHHHHHH
NLVA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8171119 [H]