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The map label for this gene is ycbK [H]

Identifier: 116327617

GI number: 116327617

Start: 985606

End: 986529

Strand: Reverse

Name: ycbK [H]

Synonym: LBL_0849

Alternate gene names: 116327617

Gene position: 986529-985606 (Counterclockwise)

Preceding gene: 116327618

Following gene: 116327610

Centisome position: 27.29

GC content: 43.07

Gene sequence:

>924_bases
ATGGAATCCAAATGGAAGCCCTTTTGGGGAATCTCTCTCGTTTTAACGGGAGCTGTTTTCTTTTCCGCAAAGGCGATCTT
TGTCAAATTGGTCTATCGATACAATATCGATTCGACTACGGCACTCGCACTCAGAATGTTGCTTGCAATTCCGTTTTTCG
CTTGGATCGCCTACCGTTCCGGAAATACGAACAATAACTTCGTAAATCTCACAAAAAAAGACTGGGGTTTAATTTTGATT
CTCAGCTTTTTAGGTTATTACCTGGCGAGTCTATTTGACTTTATAGGTTTGGAATATATCTCTGCGGGTTTGGAAAGAAT
TACCTTATTTGTATATCCTACGATCGTTCTCATTATCGGTTCTATTCTTTTCAAAAGGAAAATCAAAAGGGCGGAAATAT
TTGCGATTCTTATCACATATTCCGGAATCGTGGTCGCGTTCATAGGAGACATTCAAGTTGAAGGACCAAATACAACGAAA
GGTGTACTGTTCGTACTCGGATCGGCGATTGCCTACGCTTTATATCTCGTAGGAAGCGAATCTTTGATTCCGAAACTCGG
TTCGGTGCGATTCACTTCGTATCTAATGCTTTTATCCGGTTCGATCGTCATAATTCACTTTTTGTTCACTCGCCACCCGG
CATCTTTGATCCAGCCCACTAACGTATATCTATACGGTCTGGCTCTCGGAGTTTTAACGACCGTAATTCCGGCTTATTTC
ACAACGGAAGGAATTCGAATGATCGGTTCCGGAAAAGCGGCAATTGTGGGCTCGGTGGGGCCGATGTCTACGATTTTACT
TGCCTGGATATTTCTCGGAGAACCGATCACTCTCTCCGGACTTGTAGGAACCATCCTCGTTTTAACGGGAGCACTTTGGA
TCGGTGGAAAAAAATCGGAACCAAAAACCGAAGGGAATTCTTAA

Upstream 100 bases:

>100_bases
CCGGATTCCAAAAGTCAAAGAACGAAAACATCAGGAATTTCTTGACTTCCGTTGACGAAAAAATCTTTTTAAAAAAACCT
CGGGGATAAGAGATGGATCT

Downstream 100 bases:

>100_bases
AAAACAAAGAAGACGTATATTAAAAAGACTTAGAGTGTGTCCCAAAACGTAGGAACAATTGCAGTAATCCGCGAAGATTC
CTATAAGATCGAATGGTTTT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MESKWKPFWGISLVLTGAVFFSAKAIFVKLVYRYNIDSTTALALRMLLAIPFFAWIAYRSGNTNNNFVNLTKKDWGLILI
LSFLGYYLASLFDFIGLEYISAGLERITLFVYPTIVLIIGSILFKRKIKRAEIFAILITYSGIVVAFIGDIQVEGPNTTK
GVLFVLGSAIAYALYLVGSESLIPKLGSVRFTSYLMLLSGSIVIIHFLFTRHPASLIQPTNVYLYGLALGVLTTVIPAYF
TTEGIRMIGSGKAAIVGSVGPMSTILLAWIFLGEPITLSGLVGTILVLTGALWIGGKKSEPKTEGNS

Sequences:

>Translated_307_residues
MESKWKPFWGISLVLTGAVFFSAKAIFVKLVYRYNIDSTTALALRMLLAIPFFAWIAYRSGNTNNNFVNLTKKDWGLILI
LSFLGYYLASLFDFIGLEYISAGLERITLFVYPTIVLIIGSILFKRKIKRAEIFAILITYSGIVVAFIGDIQVEGPNTTK
GVLFVLGSAIAYALYLVGSESLIPKLGSVRFTSYLMLLSGSIVIIHFLFTRHPASLIQPTNVYLYGLALGVLTTVIPAYF
TTEGIRMIGSGKAAIVGSVGPMSTILLAWIFLGEPITLSGLVGTILVLTGALWIGGKKSEPKTEGNS
>Mature_307_residues
MESKWKPFWGISLVLTGAVFFSAKAIFVKLVYRYNIDSTTALALRMLLAIPFFAWIAYRSGNTNNNFVNLTKKDWGLILI
LSFLGYYLASLFDFIGLEYISAGLERITLFVYPTIVLIIGSILFKRKIKRAEIFAILITYSGIVVAFIGDIQVEGPNTTK
GVLFVLGSAIAYALYLVGSESLIPKLGSVRFTSYLMLLSGSIVIIHFLFTRHPASLIQPTNVYLYGLALGVLTTVIPAYF
TTEGIRMIGSGKAAIVGSVGPMSTILLAWIFLGEPITLSGLVGTILVLTGALWIGGKKSEPKTEGNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33506; Mature: 33506

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESKWKPFWGISLVLTGAVFFSAKAIFVKLVYRYNIDSTTALALRMLLAIPFFAWIAYRS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
GNTNNNFVNLTKKDWGLILILSFLGYYLASLFDFIGLEYISAGLERITLFVYPTIVLIIG
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILFKRKIKRAEIFAILITYSGIVVAFIGDIQVEGPNTTKGVLFVLGSAIAYALYLVGSE
HHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
SLIPKLGSVRFTSYLMLLSGSIVIIHFLFTRHPASLIQPTNVYLYGLALGVLTTVIPAYF
HHHHCCCCHHHHHHHHHHHCCHHEEHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
TTEGIRMIGSGKAAIVGSVGPMSTILLAWIFLGEPITLSGLVGTILVLTGALWIGGKKSE
HHCCEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PKTEGNS
CCCCCCC
>Mature Secondary Structure
MESKWKPFWGISLVLTGAVFFSAKAIFVKLVYRYNIDSTTALALRMLLAIPFFAWIAYRS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
GNTNNNFVNLTKKDWGLILILSFLGYYLASLFDFIGLEYISAGLERITLFVYPTIVLIIG
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILFKRKIKRAEIFAILITYSGIVVAFIGDIQVEGPNTTKGVLFVLGSAIAYALYLVGSE
HHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
SLIPKLGSVRFTSYLMLLSGSIVIIHFLFTRHPASLIQPTNVYLYGLALGVLTTVIPAYF
HHHHCCCCHHHHHHHHHHHCCHHEEHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
TTEGIRMIGSGKAAIVGSVGPMSTILLAWIFLGEPITLSGLVGTILVLTGALWIGGKKSE
HHCCEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PKTEGNS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]