| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327590
Identifier: 116327590
GI number: 116327590
Start: 949457
End: 950266
Strand: Direct
Name: 116327590
Synonym: LBL_0821
Alternate gene names: NA
Gene position: 949457-950266 (Clockwise)
Preceding gene: 116327589
Following gene: 116327594
Centisome position: 26.27
GC content: 38.89
Gene sequence:
>810_bases ATGAGCATGTTTTCCGATAAGAAAAAAGGAAATCCCGAATTTTGGGACGGTCAAGATCTGGGAATGATCGACATTTCCAG AGAGTTTCAGACTTCTCTCGGAATTGAAAATAAACTTTTTAATCGTTTTTCACAAGAAGAAGTACAAGAGATGTTTGAAA ATTCGGGAATCTTTCGAGTCCTTCAGGCGAGAGGTTATAAAGACTACGGGATTTTTTTGGACGGGATTTCCGACATGGAC AATCGAATTTATATCAAAAATTCCTCCGGCGAAATTCTAGTCCACATGCGCTTGAAATTTTCCGACTTTCAGTTTAAAAA GCTGGATCAATCCTATAAACTCGTTTATATTGACTGGCTCTTGACCCAGAATTTAAAGATGAAATACATGAGAACCAAAA AGAAATTGTTTCAGGGCCAAGAATATCCCGGACTTTCTCTTATGAATGAGATCACTGGATTTATCAGAATTCTTGCCACA AAATTAGGCGCTTACGGCGCTTTCAACATTCCGGAATATTTTCACGATGCCGTTTTGTTTCATAAGTCCTTTCAGTTTGT GGATCCCGAAAAGGAAGGGAAGTTCCGTGCTGTCCTTCGTTCTTTCAAAAGAACCAATTTGAGAGAATTGAGCGAGCAGA TCCACAACGAAAAGATCTGCGAGGCTTCCACGAAAGAACTTTACGTGTGGAGATACGGAGAAATGATTTCCTGCATCAAC GGATATTTTGAGTCCGTACTTTTCGACGAAGAATATTATAAAAAAGTGGAAAGGATCGTTTCGGAAATCCGGTACTTAAG GAAAATTTAA
Upstream 100 bases:
>100_bases TGCCTGCCGTGATTCTTCCGGCGGGAGGATATGCGAAGGACTTTTACGATACGGTGACGATTCACTACAACACGATCAAA GTATTTGCGACCGATTGACT
Downstream 100 bases:
>100_bases TATGTTGGGATTCTCCTTAAGACCGGAAATCATCATTCTCGACGACGACAGGGACGTCGGAGAAACTCTTGAACTCATCC TGAATAAGCTCGGATATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSMFSDKKKGNPEFWDGQDLGMIDISREFQTSLGIENKLFNRFSQEEVQEMFENSGIFRVLQARGYKDYGIFLDGISDMD NRIYIKNSSGEILVHMRLKFSDFQFKKLDQSYKLVYIDWLLTQNLKMKYMRTKKKLFQGQEYPGLSLMNEITGFIRILAT KLGAYGAFNIPEYFHDAVLFHKSFQFVDPEKEGKFRAVLRSFKRTNLRELSEQIHNEKICEASTKELYVWRYGEMISCIN GYFESVLFDEEYYKKVERIVSEIRYLRKI
Sequences:
>Translated_269_residues MSMFSDKKKGNPEFWDGQDLGMIDISREFQTSLGIENKLFNRFSQEEVQEMFENSGIFRVLQARGYKDYGIFLDGISDMD NRIYIKNSSGEILVHMRLKFSDFQFKKLDQSYKLVYIDWLLTQNLKMKYMRTKKKLFQGQEYPGLSLMNEITGFIRILAT KLGAYGAFNIPEYFHDAVLFHKSFQFVDPEKEGKFRAVLRSFKRTNLRELSEQIHNEKICEASTKELYVWRYGEMISCIN GYFESVLFDEEYYKKVERIVSEIRYLRKI >Mature_268_residues SMFSDKKKGNPEFWDGQDLGMIDISREFQTSLGIENKLFNRFSQEEVQEMFENSGIFRVLQARGYKDYGIFLDGISDMDN RIYIKNSSGEILVHMRLKFSDFQFKKLDQSYKLVYIDWLLTQNLKMKYMRTKKKLFQGQEYPGLSLMNEITGFIRILATK LGAYGAFNIPEYFHDAVLFHKSFQFVDPEKEGKFRAVLRSFKRTNLRELSEQIHNEKICEASTKELYVWRYGEMISCING YFESVLFDEEYYKKVERIVSEIRYLRKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32050; Mature: 31919
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMFSDKKKGNPEFWDGQDLGMIDISREFQTSLGIENKLFNRFSQEEVQEMFENSGIFRV CCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCEEH LQARGYKDYGIFLDGISDMDNRIYIKNSSGEILVHMRLKFSDFQFKKLDQSYKLVYIDWL HHHCCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCHHHHCCCCCEEEEEEEE LTQNLKMKYMRTKKKLFQGQEYPGLSLMNEITGFIRILATKLGAYGAFNIPEYFHDAVLF HHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH HKSFQFVDPEKEGKFRAVLRSFKRTNLRELSEQIHNEKICEASTKELYVWRYGEMISCIN HHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHCCCCCEEEEEEHHHHHHHHH GYFESVLFDEEYYKKVERIVSEIRYLRKI HHHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SMFSDKKKGNPEFWDGQDLGMIDISREFQTSLGIENKLFNRFSQEEVQEMFENSGIFRV CCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCEEH LQARGYKDYGIFLDGISDMDNRIYIKNSSGEILVHMRLKFSDFQFKKLDQSYKLVYIDWL HHHCCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCHHHHCCCCCEEEEEEEE LTQNLKMKYMRTKKKLFQGQEYPGLSLMNEITGFIRILATKLGAYGAFNIPEYFHDAVLF HHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH HKSFQFVDPEKEGKFRAVLRSFKRTNLRELSEQIHNEKICEASTKELYVWRYGEMISCIN HHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHCCCCCEEEEEEHHHHHHHHH GYFESVLFDEEYYKKVERIVSEIRYLRKI HHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA