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The map label for this gene is ybdA [C]

Identifier: 116327567

GI number: 116327567

Start: 913134

End: 914390

Strand: Reverse

Name: ybdA [C]

Synonym: LBL_0798

Alternate gene names: 116327567

Gene position: 914390-913134 (Counterclockwise)

Preceding gene: 116327568

Following gene: 116327566

Centisome position: 25.3

GC content: 45.27

Gene sequence:

>1257_bases
ATGACTCAAGCCAAAACAAAACACGATCCCTTTCAAGCCCTGAAAATTTCAGATTACCGTTTTTTCCTTTTCGGTAAATT
TATGGTGACTCTTTCCATCAGTATCCAAACCACCGTCGTTGGTTGGCAGATGTATCATATCACCGGAAGCAATTTGCACG
TCGGCTTTATCGGTCTCGCGGAGGCGATTCCTTCCATCACGATAGCCTTGTTTTCCGGTCTTGTGATCGATTCCTTTCCG
AGAAAAAAAATCGTCACTTCCGCTCTGGGCCTTCTATCAATTTGTTCTCTACTCCTAATAATATTAGTCTTTCCTAATAT
GTCTTGGATCCTTCAAGAATCCGGCGTGTATCCGATTTACGGCGTGATCTTTCTTTCCGGAATCGCGAGAGGTTTTTTAA
ATCCGGCGACTGCCGCATTCCAAACCCAACTTGTGGATAAGGAAACATTTCCAAACGCCGCGACCTGGAGTGGAATCGCT
TGGCAGACTTCCTTGGTCCTCGGTCCCCTTATGGGAGGCATGTTGATCGTCTTCGGACTTTACTTTGCATATTCGGTGGA
CTTTCTTTTGATGAGTTTCGGTTTGATTTTGATGTTACTTGTAAAAGGAAAGTCCATTCCTGAAAAACCGGAATCAAGCG
AAAGCATTTGGGAAAGTTTAAGTTCCGGTTGGAAATTTGTTTCCACACACCAAATCATCCTCGGTGCGATTTCTTTGGAT
TTGTTTGCGGTCCTTTTCGGAGGAGCAGTCGCACTCCTTCCTTCTTTTACGGAAAAAATTCTGGGACAAAGCCCCGAGAT
CTTCGGAATTCTTCGTTCGGCCCAAGGAGTCGGAGCCGTTTTATGCGCCCTTTTTATCGCCGCGAAGCCACCTAAAAAAC
ATTCTGGTTGGATCCTTCTGTCTTGCGTGTTTGGCTTCGGAATTTGTATCATCTTTTTCGGACTTTCCAACGATTATAGA
ATTTCGTTTTTCTGTCTTGCGGCCGCAGGTGCATTCGACATGGTCAGCGTAGTAATCCGTCACACAATCGTTCAAATGCA
CACTCCGGATCATATGAGAGGGAGAGTTTCCGCGGTAAATTATATCTTTATCGGTTCTTCGAACGAAATCGGAGAATTCG
AATCAGGCGTTACCGCGGAATGGCTCGGAATCCGAAGATCAATCGTCGCAGGCGGAATTCTGACTCTCTTAACCGTGGGA
TTTGTAGGAACAATCGCTCCCCGACTTCGAAAGATGCAACTGAAGGATATTCTTTAA

Upstream 100 bases:

>100_bases
CGAAACATTCCCCAATTGATCGCCGATAACATTCTACATCACGGAATGATGGTCGCCGCTCTCGGAATGTATTTTATCAA
AAACCCAATCCAGAACTAAA

Downstream 100 bases:

>100_bases
AGATTCAATATAAACCCGGCCCAGGCCGGTTTGATGAAAAGTTTTGTAGGAATTCTCACAAGCGACTTTTCATTTGCAGA
TCCGTAATTTCTGTAACGGG

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; MFS Permease; DrugProton Antiporter; Membrane Transporter; Facilitator Superfamily Transporter; Transmembrane Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family; Facilitator Superfamily Transporter Permease; MFS Family Transporter; Permease; Facilitator Superfamily; Facilitator MFS1 Protein; Permease Facilitator Superfamily; Permease Protein; Permeases Of Facilitator Superfamily; MFS Family Transporter Protein; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Integral Membrane Efflux Protein; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Siderophore Export Protein; Macrolide-Efflux Protein; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Drug Resistance Efflux Protein; Facilitator Superfamily Transporter Transporter

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTQAKTKHDPFQALKISDYRFFLFGKFMVTLSISIQTTVVGWQMYHITGSNLHVGFIGLAEAIPSITIALFSGLVIDSFP
RKKIVTSALGLLSICSLLLIILVFPNMSWILQESGVYPIYGVIFLSGIARGFLNPATAAFQTQLVDKETFPNAATWSGIA
WQTSLVLGPLMGGMLIVFGLYFAYSVDFLLMSFGLILMLLVKGKSIPEKPESSESIWESLSSGWKFVSTHQIILGAISLD
LFAVLFGGAVALLPSFTEKILGQSPEIFGILRSAQGVGAVLCALFIAAKPPKKHSGWILLSCVFGFGICIIFFGLSNDYR
ISFFCLAAAGAFDMVSVVIRHTIVQMHTPDHMRGRVSAVNYIFIGSSNEIGEFESGVTAEWLGIRRSIVAGGILTLLTVG
FVGTIAPRLRKMQLKDIL

Sequences:

>Translated_418_residues
MTQAKTKHDPFQALKISDYRFFLFGKFMVTLSISIQTTVVGWQMYHITGSNLHVGFIGLAEAIPSITIALFSGLVIDSFP
RKKIVTSALGLLSICSLLLIILVFPNMSWILQESGVYPIYGVIFLSGIARGFLNPATAAFQTQLVDKETFPNAATWSGIA
WQTSLVLGPLMGGMLIVFGLYFAYSVDFLLMSFGLILMLLVKGKSIPEKPESSESIWESLSSGWKFVSTHQIILGAISLD
LFAVLFGGAVALLPSFTEKILGQSPEIFGILRSAQGVGAVLCALFIAAKPPKKHSGWILLSCVFGFGICIIFFGLSNDYR
ISFFCLAAAGAFDMVSVVIRHTIVQMHTPDHMRGRVSAVNYIFIGSSNEIGEFESGVTAEWLGIRRSIVAGGILTLLTVG
FVGTIAPRLRKMQLKDIL
>Mature_417_residues
TQAKTKHDPFQALKISDYRFFLFGKFMVTLSISIQTTVVGWQMYHITGSNLHVGFIGLAEAIPSITIALFSGLVIDSFPR
KKIVTSALGLLSICSLLLIILVFPNMSWILQESGVYPIYGVIFLSGIARGFLNPATAAFQTQLVDKETFPNAATWSGIAW
QTSLVLGPLMGGMLIVFGLYFAYSVDFLLMSFGLILMLLVKGKSIPEKPESSESIWESLSSGWKFVSTHQIILGAISLDL
FAVLFGGAVALLPSFTEKILGQSPEIFGILRSAQGVGAVLCALFIAAKPPKKHSGWILLSCVFGFGICIIFFGLSNDYRI
SFFCLAAAGAFDMVSVVIRHTIVQMHTPDHMRGRVSAVNYIFIGSSNEIGEFESGVTAEWLGIRRSIVAGGILTLLTVGF
VGTIAPRLRKMQLKDIL

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45487; Mature: 45356

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAKTKHDPFQALKISDYRFFLFGKFMVTLSISIQTTVVGWQMYHITGSNLHVGFIGLA
CCCCCCCCCCHHEEEECCEEHHHEEEEEEEEEEEEEEEEEEEEEEEEECCCEEEEHHHHH
EAIPSITIALFSGLVIDSFPRKKIVTSALGLLSICSLLLIILVFPNMSWILQESGVYPIY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHH
GVIFLSGIARGFLNPATAAFQTQLVDKETFPNAATWSGIAWQTSLVLGPLMGGMLIVFGL
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YFAYSVDFLLMSFGLILMLLVKGKSIPEKPESSESIWESLSSGWKFVSTHQIILGAISLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHH
LFAVLFGGAVALLPSFTEKILGQSPEIFGILRSAQGVGAVLCALFIAAKPPKKHSGWILL
HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEHH
SCVFGFGICIIFFGLSNDYRISFFCLAAAGAFDMVSVVIRHTIVQMHTPDHMRGRVSAVN
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHCCCEEEEE
YIFIGSSNEIGEFESGVTAEWLGIRRSIVAGGILTLLTVGFVGTIAPRLRKMQLKDIL
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQAKTKHDPFQALKISDYRFFLFGKFMVTLSISIQTTVVGWQMYHITGSNLHVGFIGLA
CCCCCCCCCHHEEEECCEEHHHEEEEEEEEEEEEEEEEEEEEEEEEECCCEEEEHHHHH
EAIPSITIALFSGLVIDSFPRKKIVTSALGLLSICSLLLIILVFPNMSWILQESGVYPIY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHH
GVIFLSGIARGFLNPATAAFQTQLVDKETFPNAATWSGIAWQTSLVLGPLMGGMLIVFGL
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YFAYSVDFLLMSFGLILMLLVKGKSIPEKPESSESIWESLSSGWKFVSTHQIILGAISLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHH
LFAVLFGGAVALLPSFTEKILGQSPEIFGILRSAQGVGAVLCALFIAAKPPKKHSGWILL
HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEHH
SCVFGFGICIIFFGLSNDYRISFFCLAAAGAFDMVSVVIRHTIVQMHTPDHMRGRVSAVN
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHCCCEEEEE
YIFIGSSNEIGEFESGVTAEWLGIRRSIVAGGILTLLTVGFVGTIAPRLRKMQLKDIL
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA