| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327534
Identifier: 116327534
GI number: 116327534
Start: 865011
End: 866519
Strand: Reverse
Name: 116327534
Synonym: LBL_0763
Alternate gene names: NA
Gene position: 866519-865011 (Counterclockwise)
Preceding gene: 116327535
Following gene: 116327533
Centisome position: 23.97
GC content: 46.59
Gene sequence:
>1509_bases ATGAAAATAAAAAAATCTATGACGCAAAAAAGTTTTCCCTTTACGATTTCAATCAATTCAAAAATTCGAATAGGATTCCT TAGCGGGATCCTATTCTGTTTACTCACTCAGTGTAACCTGAATATTTTCGACCATAAAAAAAACAACGATCAAGAATTGG CGATAATTCTGCTTATCCTTGCCAATATGGATCCCGGTGAACAATATTCCGGCGGTTTGACGACGGTTTTCGATACCACT GTAAACGCCTTCGATCTGGCCGCTGCAAATCTTAGAGAAGGTGGAAACATAGACTTTCAAGGCGGGAATTCTTTCTTCAA CCGAGTTTGGGTTCAAGGCGGAAATTCCGCTTCCGACGGATTGGGGCCGGTTTTTAACAGCACCTCCTGCAACGGTTGTC ACGTAAAGGACGGAAGAGGAACTCCTCCCCCCAGCGGAAGCAACGTTTTTTCCACTATGTTGATTCGAGTCAGCCAAAAC GGAAAAGATCCGATTACAGGCGGACCGGTAGGACTCGACAACTACGGACTTCAGATCAATAATCGTGGAATTGGGGGAGT TCCAGCGGAAGCGACCACAACCGTACACTTTGCGGAAGAACCGGGAAATTTTCCTGACGGAGAGGCGTATTCGCTGAGGA GACCTACGTTCACCATCTCGAATTGGGGTTTTGGTCAACCTCCACTCGTGCATCAATCTCCTCGGACATCTCCCATGATC CCGGGACTCGGACTTTTAGAAGCGATTCCAGAATCGACCATTCTTTCTTTTGCGGATGAAAACGACTCGAATGGCGACGG AATCTCCGGTAAACCGAATTTCGTTTGGGACGCAAAACTGCAAAAGAAAGTATTGGGAAGATTCGGATGGAAAGCCAACG AACCGAGTTTATCACAACAAAATCAGGGAGCGTTTTTAGGAGATATAGGAATCACAAGCCCTCTTTTTCCGGATCAAAAC TGCGTAGGCGCACAGGCGGCCTGTTTCAATTCCCCTCCTGGCGTTAACGGAACCCCTGAAGGAACCGAAATTTCAACTAA AACCGCGGAGTTAGTGACTTTTTATACCAAACTTGTGGGTGTCCCCGGAAGAAGAAATTGGACCCGTCCCGATGTGATTC GAGGGAAAGAAATCTTTTCGGAAATCGGATGTAACGCCTGTCACAAGCCTTATATCTTCACGGGCCATTCGGAAGGATTT CCGGAAATTTCTTTTCAACACATAAAACCGTATACCGACCTTCTCCTCCACGATATGGGACCTGATCTCGCAGACAACCG GGAAGATTTCGAAGCCTCTGGAACGGAATGGAGAACCCCTCCTCTTTGGGGAACGGGACTCATTCAAAAAGTCAACGGCC ATAACCATCTCCTTCACGACGGACGTGCAAGAGGTCATAAAGAAGCGATTCTATGGCACGGAGGAGAAGCTTCGGCATCC AGAAATAAATTCGTCAATCTTGCGAAAGAAGATCGGGATAAGTTGATTCTATTCCTGGAATCTCTATGA
Upstream 100 bases:
>100_bases GGAGATACCATGAAAAAAACGATTACCGATGCCGCAAAAGGAGTTGGCGTTTCGATTACCGATTTCTCCATTTAAGTTCC GTTATGAAAAATGAATCATT
Downstream 100 bases:
>100_bases GAATTTTAGAATCTATTCATACTCTTGGAACAAGAACATCTCTTTCCAAAGGAATTAAAATTCTCACTCTGAGCATGATG ATCGTATTTTCGAAAATTCG
Product: Thiol oxidoreductase
Products: NA
Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Exported Protein; Signal Peptide; Thiol Oxidoreductase-Like Protein
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MKIKKSMTQKSFPFTISINSKIRIGFLSGILFCLLTQCNLNIFDHKKNNDQELAIILLILANMDPGEQYSGGLTTVFDTT VNAFDLAAANLREGGNIDFQGGNSFFNRVWVQGGNSASDGLGPVFNSTSCNGCHVKDGRGTPPPSGSNVFSTMLIRVSQN GKDPITGGPVGLDNYGLQINNRGIGGVPAEATTTVHFAEEPGNFPDGEAYSLRRPTFTISNWGFGQPPLVHQSPRTSPMI PGLGLLEAIPESTILSFADENDSNGDGISGKPNFVWDAKLQKKVLGRFGWKANEPSLSQQNQGAFLGDIGITSPLFPDQN CVGAQAACFNSPPGVNGTPEGTEISTKTAELVTFYTKLVGVPGRRNWTRPDVIRGKEIFSEIGCNACHKPYIFTGHSEGF PEISFQHIKPYTDLLLHDMGPDLADNREDFEASGTEWRTPPLWGTGLIQKVNGHNHLLHDGRARGHKEAILWHGGEASAS RNKFVNLAKEDRDKLILFLESL
Sequences:
>Translated_502_residues MKIKKSMTQKSFPFTISINSKIRIGFLSGILFCLLTQCNLNIFDHKKNNDQELAIILLILANMDPGEQYSGGLTTVFDTT VNAFDLAAANLREGGNIDFQGGNSFFNRVWVQGGNSASDGLGPVFNSTSCNGCHVKDGRGTPPPSGSNVFSTMLIRVSQN GKDPITGGPVGLDNYGLQINNRGIGGVPAEATTTVHFAEEPGNFPDGEAYSLRRPTFTISNWGFGQPPLVHQSPRTSPMI PGLGLLEAIPESTILSFADENDSNGDGISGKPNFVWDAKLQKKVLGRFGWKANEPSLSQQNQGAFLGDIGITSPLFPDQN CVGAQAACFNSPPGVNGTPEGTEISTKTAELVTFYTKLVGVPGRRNWTRPDVIRGKEIFSEIGCNACHKPYIFTGHSEGF PEISFQHIKPYTDLLLHDMGPDLADNREDFEASGTEWRTPPLWGTGLIQKVNGHNHLLHDGRARGHKEAILWHGGEASAS RNKFVNLAKEDRDKLILFLESL >Mature_502_residues MKIKKSMTQKSFPFTISINSKIRIGFLSGILFCLLTQCNLNIFDHKKNNDQELAIILLILANMDPGEQYSGGLTTVFDTT VNAFDLAAANLREGGNIDFQGGNSFFNRVWVQGGNSASDGLGPVFNSTSCNGCHVKDGRGTPPPSGSNVFSTMLIRVSQN GKDPITGGPVGLDNYGLQINNRGIGGVPAEATTTVHFAEEPGNFPDGEAYSLRRPTFTISNWGFGQPPLVHQSPRTSPMI PGLGLLEAIPESTILSFADENDSNGDGISGKPNFVWDAKLQKKVLGRFGWKANEPSLSQQNQGAFLGDIGITSPLFPDQN CVGAQAACFNSPPGVNGTPEGTEISTKTAELVTFYTKLVGVPGRRNWTRPDVIRGKEIFSEIGCNACHKPYIFTGHSEGF PEISFQHIKPYTDLLLHDMGPDLADNREDFEASGTEWRTPPLWGTGLIQKVNGHNHLLHDGRARGHKEAILWHGGEASAS RNKFVNLAKEDRDKLILFLESL
Specific function: Unknown
COG id: COG3488
COG function: function code C; Predicted thiol oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54486; Mature: 54486
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS51007 CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKKSMTQKSFPFTISINSKIRIGFLSGILFCLLTQCNLNIFDHKKNNDQELAIILLIL CCCCHHHHCCCCCEEEEECCEEEEHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEE ANMDPGEQYSGGLTTVFDTTVNAFDLAAANLREGGNIDFQGGNSFFNRVWVQGGNSASDG CCCCCCHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCCCC LGPVFNSTSCNGCHVKDGRGTPPPSGSNVFSTMLIRVSQNGKDPITGGPVGLDNYGLQIN CCCCCCCCCCCCCEEECCCCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCEEEC NRGIGGVPAEATTTVHFAEEPGNFPDGEAYSLRRPTFTISNWGFGQPPLVHQSPRTSPMI CCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCC PGLGLLEAIPESTILSFADENDSNGDGISGKPNFVWDAKLQKKVLGRFGWKANEPSLSQQ CCCHHHHHCCCHHEEEECCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCC NQGAFLGDIGITSPLFPDQNCVGAQAACFNSPPGVNGTPEGTEISTKTAELVTFYTKLVG CCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHC VPGRRNWTRPDVIRGKEIFSEIGCNACHKPYIFTGHSEGFPEISFQHIKPYTDLLLHDMG CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHCC PDLADNREDFEASGTEWRTPPLWGTGLIQKVNGHNHLLHDGRARGHKEAILWHGGEASAS CCCCCCCHHHCCCCCCCCCCCCCCCCHHEEECCCCCEECCCCCCCCCEEEEEECCCCCCC RNKFVNLAKEDRDKLILFLESL HHHHHHHHHCCCCEEEEEEECC >Mature Secondary Structure MKIKKSMTQKSFPFTISINSKIRIGFLSGILFCLLTQCNLNIFDHKKNNDQELAIILLIL CCCCHHHHCCCCCEEEEECCEEEEHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEE ANMDPGEQYSGGLTTVFDTTVNAFDLAAANLREGGNIDFQGGNSFFNRVWVQGGNSASDG CCCCCCHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCCCC LGPVFNSTSCNGCHVKDGRGTPPPSGSNVFSTMLIRVSQNGKDPITGGPVGLDNYGLQIN CCCCCCCCCCCCCEEECCCCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCEEEC NRGIGGVPAEATTTVHFAEEPGNFPDGEAYSLRRPTFTISNWGFGQPPLVHQSPRTSPMI CCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCC PGLGLLEAIPESTILSFADENDSNGDGISGKPNFVWDAKLQKKVLGRFGWKANEPSLSQQ CCCHHHHHCCCHHEEEECCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCC NQGAFLGDIGITSPLFPDQNCVGAQAACFNSPPGVNGTPEGTEISTKTAELVTFYTKLVG CCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHC VPGRRNWTRPDVIRGKEIFSEIGCNACHKPYIFTGHSEGFPEISFQHIKPYTDLLLHDMG CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHCC PDLADNREDFEASGTEWRTPPLWGTGLIQKVNGHNHLLHDGRARGHKEAILWHGGEASAS CCCCCCCHHHCCCCCCCCCCCCCCCCHHEEECCCCCEECCCCCCCCCEEEEEECCCCCCC RNKFVNLAKEDRDKLILFLESL HHHHHHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA