| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is yjgQ [C]
Identifier: 116327483
GI number: 116327483
Start: 800698
End: 801858
Strand: Reverse
Name: yjgQ [C]
Synonym: LBL_0706
Alternate gene names: 116327483
Gene position: 801858-800698 (Counterclockwise)
Preceding gene: 116327486
Following gene: 116327481
Centisome position: 22.18
GC content: 40.4
Gene sequence:
>1161_bases ATGTCTGCAATTCCTTTCCACTCTCATTCACTCAAAAACTTTTTTCACAAATGGAAACGGGAATTTATTCCCCTTAAAAT TTTGGATCGATATTTATTCGGAGAGTTCTTCAAGGTCTTTATCGGAACCGTAGTTCTGCTTACCGGAATCATGCTCCTAT CTCTCGTAAACGACAACATGAGAAATTTTACGACCACAAAAGCGCCTAGATACCACGTGGCTCTTTTTTTGGTCTACAGT CTTCCAAAAATCATATCCACTACCGTCGTTTCAATGTCCTTGATGTTTTCGATCTGTTTTACCGTCGGCCAGTTTTCCGT GAATAAAGAACTCGTATCGATGATGGCTGCGGGAGTTTCTTTTTTTAGAATCGTGGCACCACTTATCTTATTCGGAATTT TAATGTGGATCGTGATGCTTTTCGTAACGGAACTCATCGTAAGACCGGTCAACAAATTGGCAAAGATAGAACACGATATT CTTACGGAAGGAATGGGAACTCTTGCAAACAGTGTGTATCAATTTCATGTAAAGGGGAAGGAAGGTTTTTATTATTTGTA TTTTTACGACCCCAATAAGGACGAAATCAACGGCGGATTCAATTACATTCGACTCCGGAATGATGGATCGCCTGAAACCG TAATTTCCTCCTTAAAGGCGAAGTATAACTACGAAACCAAACTCTGGAAGATGAAGAAGGTGGAAGAGTGGCATTTCGAT AACGACTTAAAACTCAGTTCCCAGGAATCTTTTGAGGAGAAAGAATACGAACTTCCAGAAGATCCCACCTATTTTAAGAT TCCTGCAGGTTCGGTGGAAGAAATGAATCTCTTTCAGTTGAAAGAAGAGGAAAAAAGAAGAATTCAAAAAGGCCTTTCTT ACGGAGACGTCCTTACTGAAAAACACTCCGTATTTGCATTGCCTATGATGACGATCATCGTAACCCTAATCGGAACGATC GCGGGTTATTTCACCAAAAAGACAGCGGGAGTCGCATCTTTAGGAATCACGATCGGAGTAGTATTGATTTATTATATATT CAATTCCGCCGGTAAATCCTTAGGAGAAAACGGAGTTATACCACCTTTCGTAGGAGTTTGGATCACTCCCAGTCTGTTTT TAGGACTGTGTTTCTGGATGTTCCGTCGTATGAATCTTTAG
Upstream 100 bases:
>100_bases ATTTGCTTTGCACATCCGATCACATTCAAAAAATAAAACAAGGGATTGCCCATTTACGAAAACCTTGTCAAGATGACCCC AAATTTCTAAAAAGAAGAAT
Downstream 100 bases:
>100_bases TTGGTAGATGGCGGCATAAATGGTTTCGTCATAGCGGACATCTTTCAATTACAAAATGGTTATATACTTGTTCCCGATTT TGGACTTCAAGTCATAGTAT
Product: permease
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Permease Family Protein; YjgP/YjgQ Family Permease; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSAIPFHSHSLKNFFHKWKREFIPLKILDRYLFGEFFKVFIGTVVLLTGIMLLSLVNDNMRNFTTTKAPRYHVALFLVYS LPKIISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVAPLILFGILMWIVMLFVTELIVRPVNKLAKIEHDI LTEGMGTLANSVYQFHVKGKEGFYYLYFYDPNKDEINGGFNYIRLRNDGSPETVISSLKAKYNYETKLWKMKKVEEWHFD NDLKLSSQESFEEKEYELPEDPTYFKIPAGSVEEMNLFQLKEEEKRRIQKGLSYGDVLTEKHSVFALPMMTIIVTLIGTI AGYFTKKTAGVASLGITIGVVLIYYIFNSAGKSLGENGVIPPFVGVWITPSLFLGLCFWMFRRMNL
Sequences:
>Translated_386_residues MSAIPFHSHSLKNFFHKWKREFIPLKILDRYLFGEFFKVFIGTVVLLTGIMLLSLVNDNMRNFTTTKAPRYHVALFLVYS LPKIISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVAPLILFGILMWIVMLFVTELIVRPVNKLAKIEHDI LTEGMGTLANSVYQFHVKGKEGFYYLYFYDPNKDEINGGFNYIRLRNDGSPETVISSLKAKYNYETKLWKMKKVEEWHFD NDLKLSSQESFEEKEYELPEDPTYFKIPAGSVEEMNLFQLKEEEKRRIQKGLSYGDVLTEKHSVFALPMMTIIVTLIGTI AGYFTKKTAGVASLGITIGVVLIYYIFNSAGKSLGENGVIPPFVGVWITPSLFLGLCFWMFRRMNL >Mature_385_residues SAIPFHSHSLKNFFHKWKREFIPLKILDRYLFGEFFKVFIGTVVLLTGIMLLSLVNDNMRNFTTTKAPRYHVALFLVYSL PKIISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVAPLILFGILMWIVMLFVTELIVRPVNKLAKIEHDIL TEGMGTLANSVYQFHVKGKEGFYYLYFYDPNKDEINGGFNYIRLRNDGSPETVISSLKAKYNYETKLWKMKKVEEWHFDN DLKLSSQESFEEKEYELPEDPTYFKIPAGSVEEMNLFQLKEEEKRRIQKGLSYGDVLTEKHSVFALPMMTIIVTLIGTIA GYFTKKTAGVASLGITIGVVLIYYIFNSAGKSLGENGVIPPFVGVWITPSLFLGLCFWMFRRMNL
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44288; Mature: 44157
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIPFHSHSLKNFFHKWKREFIPLKILDRYLFGEFFKVFIGTVVLLTGIMLLSLVNDNM CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH RNFTTTKAPRYHVALFLVYSLPKIISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVS HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRIVAPLILFGILMWIVMLFVTELIVRPVNKLAKIEHDILTEGMGTLANSVYQFHVKGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC EGFYYLYFYDPNKDEINGGFNYIRLRNDGSPETVISSLKAKYNYETKLWKMKKVEEWHFD CCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC NDLKLSSQESFEEKEYELPEDPTYFKIPAGSVEEMNLFQLKEEEKRRIQKGLSYGDVLTE CCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHC KHSVFALPMMTIIVTLIGTIAGYFTKKTAGVASLGITIGVVLIYYIFNSAGKSLGENGVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPFVGVWITPSLFLGLCFWMFRRMNL CCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAIPFHSHSLKNFFHKWKREFIPLKILDRYLFGEFFKVFIGTVVLLTGIMLLSLVNDNM CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH RNFTTTKAPRYHVALFLVYSLPKIISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVS HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRIVAPLILFGILMWIVMLFVTELIVRPVNKLAKIEHDILTEGMGTLANSVYQFHVKGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC EGFYYLYFYDPNKDEINGGFNYIRLRNDGSPETVISSLKAKYNYETKLWKMKKVEEWHFD CCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC NDLKLSSQESFEEKEYELPEDPTYFKIPAGSVEEMNLFQLKEEEKRRIQKGLSYGDVLTE CCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHC KHSVFALPMMTIIVTLIGTIAGYFTKKTAGVASLGITIGVVLIYYIFNSAGKSLGENGVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPFVGVWITPSLFLGLCFWMFRRMNL CCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA