| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327478
Identifier: 116327478
GI number: 116327478
Start: 792264
End: 792878
Strand: Reverse
Name: 116327478
Synonym: LBL_0700
Alternate gene names: NA
Gene position: 792878-792264 (Counterclockwise)
Preceding gene: 116327479
Following gene: 116327477
Centisome position: 21.94
GC content: 33.98
Gene sequence:
>615_bases ATGTCACATATTATTTTAAAAAAACCCACTCTTCAAAAAAATATACTCCATGGATTAGAAAATCCCGAAGAACTCGAACG AGTTAAAAACTTCATCAAAAATATATTTTCAGGTAGCGGTTATAACAAATCGCCTTATACAACATTCAACTTAGATCCTT GGTCCACTTGGTTTTATGTTACCGACTCAGAACAAAAAATTCTATCTGCAATGAGAATTGTAGAGAAGAAACCGAATAAT TTTCTCCCTGTTGAGATGGCAGTTATTTACGGCTCTAATCCACAAAAAAGATACGCTGTGCCAGAAGAGAATGTTGCAGA TTGGAACAGTGTAGCGTTTTTACGCACCGTCATGGGGGGTAAAGCGGCAACAATGAATTTTAAAATGATCGTCAACTACT GCTTACAAAAGAATTTTTCGAAAATCTACGGAATGTATCATCAAAAATTAGCTTCTATTGAAAGAATTTATTTGTCCGCC GGAGCCGAGCTATCAAAGCGTTTTTCCAAACCAGTGTTTTTTCCTGAAGATTATTTTAATCAGGAATTAGTACTCTTAAA CATCATCGAAATCGATAAAACAAGTTTACAAAAAATAAGTGTTAATTTAGTGTAA
Upstream 100 bases:
>100_bases GCTTATTCTTTAAACCTATGTTAAAATTTTTAAGAAAAGTAATAACTCTTATAAAATAATTCATTGAAATCCAATCCAAG AATGGCAAAATATAAATATT
Downstream 100 bases:
>100_bases TTTTTGATAAATTTGTAATGAATATTCCATTAATAATTAGCCTTTTATGTTCCTTAGTAGTGATACTTTTAGGAATTTAC GTTTTTCGATTTGGTCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSHIILKKPTLQKNILHGLENPEELERVKNFIKNIFSGSGYNKSPYTTFNLDPWSTWFYVTDSEQKILSAMRIVEKKPNN FLPVEMAVIYGSNPQKRYAVPEENVADWNSVAFLRTVMGGKAATMNFKMIVNYCLQKNFSKIYGMYHQKLASIERIYLSA GAELSKRFSKPVFFPEDYFNQELVLLNIIEIDKTSLQKISVNLV
Sequences:
>Translated_204_residues MSHIILKKPTLQKNILHGLENPEELERVKNFIKNIFSGSGYNKSPYTTFNLDPWSTWFYVTDSEQKILSAMRIVEKKPNN FLPVEMAVIYGSNPQKRYAVPEENVADWNSVAFLRTVMGGKAATMNFKMIVNYCLQKNFSKIYGMYHQKLASIERIYLSA GAELSKRFSKPVFFPEDYFNQELVLLNIIEIDKTSLQKISVNLV >Mature_203_residues SHIILKKPTLQKNILHGLENPEELERVKNFIKNIFSGSGYNKSPYTTFNLDPWSTWFYVTDSEQKILSAMRIVEKKPNNF LPVEMAVIYGSNPQKRYAVPEENVADWNSVAFLRTVMGGKAATMNFKMIVNYCLQKNFSKIYGMYHQKLASIERIYLSAG AELSKRFSKPVFFPEDYFNQELVLLNIIEIDKTSLQKISVNLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23576; Mature: 23444
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHIILKKPTLQKNILHGLENPEELERVKNFIKNIFSGSGYNKSPYTTFNLDPWSTWFYV CCCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEE TDSEQKILSAMRIVEKKPNNFLPVEMAVIYGSNPQKRYAVPEENVADWNSVAFLRTVMGG ECCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC KAATMNFKMIVNYCLQKNFSKIYGMYHQKLASIERIYLSAGAELSKRFSKPVFFPEDYFN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHCC QELVLLNIIEIDKTSLQKISVNLV CCEEEEEEEECCCHHHHEEEEECC >Mature Secondary Structure SHIILKKPTLQKNILHGLENPEELERVKNFIKNIFSGSGYNKSPYTTFNLDPWSTWFYV CCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEE TDSEQKILSAMRIVEKKPNNFLPVEMAVIYGSNPQKRYAVPEENVADWNSVAFLRTVMGG ECCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC KAATMNFKMIVNYCLQKNFSKIYGMYHQKLASIERIYLSAGAELSKRFSKPVFFPEDYFN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHCC QELVLLNIIEIDKTSLQKISVNLV CCEEEEEEEECCCHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA