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The map label for this gene is ygbT [H]

Identifier: 116327441

GI number: 116327441

Start: 731514

End: 732398

Strand: Reverse

Name: ygbT [H]

Synonym: LBL_0657

Alternate gene names: 116327441

Gene position: 732398-731514 (Counterclockwise)

Preceding gene: 116327443

Following gene: 116327440

Centisome position: 20.26

GC content: 45.42

Gene sequence:

>885_bases
ATGCCGAACAGAAACCTACAAGAACTTCCGAAATTTGAAGACAATTGGTCGCATTTATACTTTGAAAAGGGTAGGATCGA
CCAATTTCAGAAATCCATCGGTTTTCATTATCTGGATAAAGTCGTTCCTATTCCGATCGAAACGATCGGCCTTCTTTTAT
TGGGTCCGGGAACCTCGATCACTCACGAAGCGATCAAAAGGATTTCGGATAGCAGGTGTCTTCTCGCTTGGACGGGCGAA
GGCGGAGTTCGTTTTTATTCCGCCGGTTATACAGGTACTTATTCCGCCAGAAACTTACTTCGTCAGGTGGAAGCTTACGG
TAATCCGAAGGAAAGAGTGTCGGTGATCCGTAAAATGTATCAGTTCCGTTTTTCGGACGAAATTCCAGCGGACGCTACCA
TCGAACAAATTCGCGGTTTGGAAGGGGCGAGGGTTCGAAAAATTTACAGGGAATGGTCCGAAAATTCCGGAGTTCCTTGG
AAGAGCAGATCTTACGACCAAAACAGCTGGGACTGGAGCGATCCGATCAACCGTGCTCTTTCTTCCGCAAACGCTTGTCT
TTACGGAGTGGTTCATGCGGCGATTCTTCAATCCGGTTTTTCTCCGGCTATCGGTTTTGTTCATACGGGCAAACAGTTGT
CCTTCGTCTACGATATTGCGGATCTTTATAAAGCTGAAATTACGATCCCTTTGGCTTTCGAAATTACTGCTGAAGACGCG
ACTAACGTAGAAAGAAGGGTCCGTTTCGCCTGCAGAGATAAATTCAAACATAGTAAATTACTTAAACGAATTATTCCGGA
TATCAAGGAGCTGATCTATGGTGGTTTTGATTTTGGAGAGAGTGAAGACTTCTCAGAGGGGAGAGATGTCGCGGTTAGCC
ATTGA

Upstream 100 bases:

>100_bases
GCACATTATATTCTTAATTTATAATAAACAAATATATTTTAAATAAATAATTTTTATTATATTCATTTTTTATATTACAA
GATCCGACAATCAATTCGTT

Downstream 100 bases:

>100_bases
ATTGAAGCCGGGCGTTTTTGTAGCTTCCATTAATGCGAGAGTTCGAGATCGAATCTGGAAAAAAATTTCCGAAGCATGGA
AATCCGACGCGATCATGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MPNRNLQELPKFEDNWSHLYFEKGRIDQFQKSIGFHYLDKVVPIPIETIGLLLLGPGTSITHEAIKRISDSRCLLAWTGE
GGVRFYSAGYTGTYSARNLLRQVEAYGNPKERVSVIRKMYQFRFSDEIPADATIEQIRGLEGARVRKIYREWSENSGVPW
KSRSYDQNSWDWSDPINRALSSANACLYGVVHAAILQSGFSPAIGFVHTGKQLSFVYDIADLYKAEITIPLAFEITAEDA
TNVERRVRFACRDKFKHSKLLKRIIPDIKELIYGGFDFGESEDFSEGRDVAVSH

Sequences:

>Translated_294_residues
MPNRNLQELPKFEDNWSHLYFEKGRIDQFQKSIGFHYLDKVVPIPIETIGLLLLGPGTSITHEAIKRISDSRCLLAWTGE
GGVRFYSAGYTGTYSARNLLRQVEAYGNPKERVSVIRKMYQFRFSDEIPADATIEQIRGLEGARVRKIYREWSENSGVPW
KSRSYDQNSWDWSDPINRALSSANACLYGVVHAAILQSGFSPAIGFVHTGKQLSFVYDIADLYKAEITIPLAFEITAEDA
TNVERRVRFACRDKFKHSKLLKRIIPDIKELIYGGFDFGESEDFSEGRDVAVSH
>Mature_293_residues
PNRNLQELPKFEDNWSHLYFEKGRIDQFQKSIGFHYLDKVVPIPIETIGLLLLGPGTSITHEAIKRISDSRCLLAWTGEG
GVRFYSAGYTGTYSARNLLRQVEAYGNPKERVSVIRKMYQFRFSDEIPADATIEQIRGLEGARVRKIYREWSENSGVPWK
SRSYDQNSWDWSDPINRALSSANACLYGVVHAAILQSGFSPAIGFVHTGKQLSFVYDIADLYKAEITIPLAFEITAEDAT
NVERRVRFACRDKFKHSKLLKRIIPDIKELIYGGFDFGESEDFSEGRDVAVSH

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789113, Length=273, Percent_Identity=41.3919413919414, Blast_Score=229, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019851 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 33499; Mature: 33368

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNRNLQELPKFEDNWSHLYFEKGRIDQFQKSIGFHYLDKVVPIPIETIGLLLLGPGTSI
CCCCCHHHCCCCCCCCCEEEEECCCHHHHHHHHCHHHHHHCCCCCHHHCCEEEECCCCCH
THEAIKRISDSRCLLAWTGEGGVRFYSAGYTGTYSARNLLRQVEAYGNPKERVSVIRKMY
HHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
QFRFSDEIPADATIEQIRGLEGARVRKIYREWSENSGVPWKSRSYDQNSWDWSDPINRAL
HHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
SSANACLYGVVHAAILQSGFSPAIGFVHTGKQLSFVYDIADLYKAEITIPLAFEITAEDA
HHCCHHHHHHHHHHHHHCCCCCCHHHEECCCHHHHHHHHHHHHHHHEEEEEEEEEECCCH
TNVERRVRFACRDKFKHSKLLKRIIPDIKELIYGGFDFGESEDFSEGRDVAVSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure 
PNRNLQELPKFEDNWSHLYFEKGRIDQFQKSIGFHYLDKVVPIPIETIGLLLLGPGTSI
CCCCHHHCCCCCCCCCEEEEECCCHHHHHHHHCHHHHHHCCCCCHHHCCEEEECCCCCH
THEAIKRISDSRCLLAWTGEGGVRFYSAGYTGTYSARNLLRQVEAYGNPKERVSVIRKMY
HHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
QFRFSDEIPADATIEQIRGLEGARVRKIYREWSENSGVPWKSRSYDQNSWDWSDPINRAL
HHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
SSANACLYGVVHAAILQSGFSPAIGFVHTGKQLSFVYDIADLYKAEITIPLAFEITAEDA
HHCCHHHHHHHHHHHHHCCCCCCHHHEECCCHHHHHHHHHHHHHHHEEEEEEEEEECCCH
TNVERRVRFACRDKFKHSKLLKRIIPDIKELIYGGFDFGESEDFSEGRDVAVSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]