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The map label for this gene is yncE [C]

Identifier: 116327428

GI number: 116327428

Start: 713606

End: 714946

Strand: Reverse

Name: yncE [C]

Synonym: LBL_0642

Alternate gene names: 116327428

Gene position: 714946-713606 (Counterclockwise)

Preceding gene: 116327429

Following gene: 116327422

Centisome position: 19.78

GC content: 42.21

Gene sequence:

>1341_bases
TTGAACTCGAATTCCGAAAAAAAATTCTTCAAACCGAACGGAACACTTTTGATTCCGATCTTCCTATTTCTCATCTGCTG
TGGGAGCGGAAATTCCTCCTTAATTTCTTCTCTCTCCGACAGAGAAAAAAAAACCGTTAAATTCAGTGTACATCCTTACA
AAGGAACCGTGATTCAATCGCGAGAAGAGACAATTCCTTTCAAAATTCTAGAAACCGATAAAAACATCGCCCTCGTAGAA
ATGGAAGTGCCCGTTTACAAAAACGATATCGAGTTGAAACTTTCTTCTCCGGGTTTCCAAAGTTCCTTCTTCCGTGCAAA
AAACGCGGAGGAGCTGAACGAGAAGTTAATCGCACTCGATAAAGAAGGCATAACGCATCGTTTTATCACAAGATTCAAAA
CCGGAATACAACCCAAAAGTGTCCGTTTTATCGATAACACGAGACTTGCAATTCCCCTTTTGGAAGACGAAGGGATAGAC
GTTTTGGATATAAAAACCGGTGAAACGGTCCGCCTTTCTCCTCCCGAAAAATACAAAAAGAAATTGGGTTTTGTGGAAAC
GATCGCGATTCCTAAACACAACGAACTTTGGGTTAGTCAGATGCAGGCGAATGCAGTTCACGTCTTCGATTTAAAAACTC
TCGCGTATAAAGCGACAGTGGATCTAACAGGCAAGTGGTCTAAGATTCTTCTTTATGATCCGATCCGAGATTTAGTCTAT
TGTTCGAATTGGATCAGCGAAGACATTTCCGTCATCGATAGAAAAACGAAAATGGAAATTCGAAAGACCGACAAGATCGG
TTTACCTCGAGGTCTTCTTCTCTCCAAAGACGGTAAAGAATTATACATCGCTCAATTTTCAGCGAGCAATCAGGAATCCG
GAGGTGGTAGGCTCGGAATCTATTCCATGGAAAAAGAAAAGCTGATTGATACGATCGGCCCTCCCGGCAACAAACGCCAT
ATCGTTCCGGGCAACACGGAAAATAAAATATACGTCTCGGACATGTGTTGTAGTAAGATCGAAGTCTACGATTTAAAAGA
AAAAAAAGTTCAGAAGACGATCCCAGTATTCGATAAACCGAATACGATTGCCCTTTCTCCCGACGGTAAATATCTCTACG
TTTCTTGCAGAGGCCCGAACAATCCCACCGAAGGATATCTCAAAAAAGGATTGGTTCTCGGAAGAGTGTACGTTATCGAT
ACGACAACCGACACGGTAAAAGAATTTTGGGAAGCGGGAAACCAACCTACAGGTCTCGATATTTCACCCGACAACCGCCA
CTTAGTAATCTCGGATTTTTTAGATCATCAGATTCGAGTCTACCGCAGAGACGGTTTTTAA

Upstream 100 bases:

>100_bases
TGCAATTTATCATTTTCTAATACGTCCTTTTCACTGGGTCAACTTGATTCTCGGAAATCAAACATACGCGAAAAAGAATT
TATAACTTCAGGAGCCCTTT

Downstream 100 bases:

>100_bases
TTCCGGAGCCGAAAACGTTTTTTAACAAAAAACTGTTGCATTTGGAAATTCAGCCAAAAACATGTCTCTTATCGGGCCTG
TAGCTCAGCTGGTTAGAGCA

Product: surface antigen OrfC lipoprotein

Products: NA

Alternate protein names: YVTN Beta-Propeller Repeat-Containing Protein; Surface Layer Protein; Surface Antigen OrfC Lipoprotein; IPT/TIG Domain Protein; 40-Residue YVTN Family Beta-Propeller Repeat Protein; Cell Surface Protein; YVTN Family Beta-Propeller Repeat Family Protein

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MNSNSEKKFFKPNGTLLIPIFLFLICCGSGNSSLISSLSDREKKTVKFSVHPYKGTVIQSREETIPFKILETDKNIALVE
MEVPVYKNDIELKLSSPGFQSSFFRAKNAEELNEKLIALDKEGITHRFITRFKTGIQPKSVRFIDNTRLAIPLLEDEGID
VLDIKTGETVRLSPPEKYKKKLGFVETIAIPKHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVY
CSNWISEDISVIDRKTKMEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMEKEKLIDTIGPPGNKRH
IVPGNTENKIYVSDMCCSKIEVYDLKEKKVQKTIPVFDKPNTIALSPDGKYLYVSCRGPNNPTEGYLKKGLVLGRVYVID
TTTDTVKEFWEAGNQPTGLDISPDNRHLVISDFLDHQIRVYRRDGF

Sequences:

>Translated_446_residues
MNSNSEKKFFKPNGTLLIPIFLFLICCGSGNSSLISSLSDREKKTVKFSVHPYKGTVIQSREETIPFKILETDKNIALVE
MEVPVYKNDIELKLSSPGFQSSFFRAKNAEELNEKLIALDKEGITHRFITRFKTGIQPKSVRFIDNTRLAIPLLEDEGID
VLDIKTGETVRLSPPEKYKKKLGFVETIAIPKHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVY
CSNWISEDISVIDRKTKMEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMEKEKLIDTIGPPGNKRH
IVPGNTENKIYVSDMCCSKIEVYDLKEKKVQKTIPVFDKPNTIALSPDGKYLYVSCRGPNNPTEGYLKKGLVLGRVYVID
TTTDTVKEFWEAGNQPTGLDISPDNRHLVISDFLDHQIRVYRRDGF
>Mature_446_residues
MNSNSEKKFFKPNGTLLIPIFLFLICCGSGNSSLISSLSDREKKTVKFSVHPYKGTVIQSREETIPFKILETDKNIALVE
MEVPVYKNDIELKLSSPGFQSSFFRAKNAEELNEKLIALDKEGITHRFITRFKTGIQPKSVRFIDNTRLAIPLLEDEGID
VLDIKTGETVRLSPPEKYKKKLGFVETIAIPKHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVY
CSNWISEDISVIDRKTKMEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMEKEKLIDTIGPPGNKRH
IVPGNTENKIYVSDMCCSKIEVYDLKEKKVQKTIPVFDKPNTIALSPDGKYLYVSCRGPNNPTEGYLKKGLVLGRVYVID
TTTDTVKEFWEAGNQPTGLDISPDNRHLVISDFLDHQIRVYRRDGF

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50508; Mature: 50508

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNSEKKFFKPNGTLLIPIFLFLICCGSGNSSLISSLSDREKKTVKFSVHPYKGTVIQS
CCCCCCCEEECCCCCEEHHHHHHHEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEC
REETIPFKILETDKNIALVEMEVPVYKNDIELKLSSPGFQSSFFRAKNAEELNEKLIALD
CCCCCCEEEEECCCCEEEEEEECCEECCCEEEEECCCCCCHHHHHCCCHHHHHHHEEEEC
KEGITHRFITRFKTGIQPKSVRFIDNTRLAIPLLEDEGIDVLDIKTGETVRLSPPEKYKK
CCCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCEEEECCCCEEECCCCHHHHH
KLGFVETIAIPKHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVY
HCCCEEEEECCCCCCHHHHHHCCCEEEEEEEEEEEEEEEEEECCCCEEEEEECCHHHHHH
CSNWISEDISVIDRKTKMEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGI
HHHHHHHHHHHHCCHHHEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCEEEE
YSMEKEKLIDTIGPPGNKRHIVPGNTENKIYVSDMCCSKIEVYDLKEKKVQKTIPVFDKP
EECCHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCCCCEEEEECHHHHHHHCCCCCCCC
NTIALSPDGKYLYVSCRGPNNPTEGYLKKGLVLGRVYVIDTTTDTVKEFWEAGNQPTGLD
CEEEECCCCCEEEEEECCCCCCCHHHHHCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCE
ISPDNRHLVISDFLDHQIRVYRRDGF
ECCCCCEEEEECCCCCEEEEEEECCC
>Mature Secondary Structure
MNSNSEKKFFKPNGTLLIPIFLFLICCGSGNSSLISSLSDREKKTVKFSVHPYKGTVIQS
CCCCCCCEEECCCCCEEHHHHHHHEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEC
REETIPFKILETDKNIALVEMEVPVYKNDIELKLSSPGFQSSFFRAKNAEELNEKLIALD
CCCCCCEEEEECCCCEEEEEEECCEECCCEEEEECCCCCCHHHHHCCCHHHHHHHEEEEC
KEGITHRFITRFKTGIQPKSVRFIDNTRLAIPLLEDEGIDVLDIKTGETVRLSPPEKYKK
CCCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCEEEECCCCEEECCCCHHHHH
KLGFVETIAIPKHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVY
HCCCEEEEECCCCCCHHHHHHCCCEEEEEEEEEEEEEEEEEECCCCEEEEEECCHHHHHH
CSNWISEDISVIDRKTKMEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGI
HHHHHHHHHHHHCCHHHEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCEEEE
YSMEKEKLIDTIGPPGNKRHIVPGNTENKIYVSDMCCSKIEVYDLKEKKVQKTIPVFDKP
EECCHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCCCCEEEEECHHHHHHHCCCCCCCC
NTIALSPDGKYLYVSCRGPNNPTEGYLKKGLVLGRVYVIDTTTDTVKEFWEAGNQPTGLD
CEEEECCCCCEEEEEECCCCCCCHHHHHCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCE
ISPDNRHLVISDFLDHQIRVYRRDGF
ECCCCCEEEEECCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA