| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327406
Identifier: 116327406
GI number: 116327406
Start: 688010
End: 688639
Strand: Reverse
Name: 116327406
Synonym: LBL_0615
Alternate gene names: NA
Gene position: 688639-688010 (Counterclockwise)
Preceding gene: 116327408
Following gene: 116327401
Centisome position: 19.05
GC content: 34.76
Gene sequence:
>630_bases ATGATTCCCCAAAGTCTACTCTTGAAAATTTTAATCTCGATTTTCCCAATCGCAATCATAATCGGAAATTTCTATCTTTT CAGCATTACAAAGGACAAAATCAAAGCATTTACGATTCAGCCTCCATTTTTATCTTTCGATTTTACGAATTCTTATCTTT CCAATAAAAACTCAAGAATCAGTCATCTTTCGGATCGAAATCCTTATACAACATGGACGAAACTTCGCCATTCAAATAGA ACGGAAGACTTCTTCTTAGAATTAAGACAAACACACCATCTTAAAGAAAATAAACCTGAAATTTCAAAATGGAAAACCCT TCATGTTGTAGGCTGCAAACAAACTTTAGAAAAATTAAAACTCGGTTTGATTCTGAGAGAATCGATCGATATGGACAAAG AACTTAGGATGCCCAAGGACAGAATGTTAGGGGAAAAAGTTCTGAACTTTTCAAAATCTAAACATTTTAAAATTCCATTA GAACCTTACTATCAGCCGGAAGCAAGTTTGGAGTTCCCACAGAAAATGTTTATTTGGACGGTCAACGGAACTTGGATCAC AGAAAACCAGAGCTATCTCAATGAAAAAAAGGGATTTTGCTTGGAAGATATATGGCTGAGTGAGGACTAA
Upstream 100 bases:
>100_bases CCTATATTCATCATTGATCACCTTTTTATTTTTGTTTGAAAGATTCAAAAAACCAGAATCCTGATTGTCCTAAAATGCAA GTTTTCACATTTTTGATCCT
Downstream 100 bases:
>100_bases AAATCACACAATTTCGCAAAAAGAGTCGGAATTCCCACAAACACTGGGGAGAACGACGGGAATCGAACCCGCGACGGCCA GTACCACAAACTGGAGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MIPQSLLLKILISIFPIAIIIGNFYLFSITKDKIKAFTIQPPFLSFDFTNSYLSNKNSRISHLSDRNPYTTWTKLRHSNR TEDFFLELRQTHHLKENKPEISKWKTLHVVGCKQTLEKLKLGLILRESIDMDKELRMPKDRMLGEKVLNFSKSKHFKIPL EPYYQPEASLEFPQKMFIWTVNGTWITENQSYLNEKKGFCLEDIWLSED
Sequences:
>Translated_209_residues MIPQSLLLKILISIFPIAIIIGNFYLFSITKDKIKAFTIQPPFLSFDFTNSYLSNKNSRISHLSDRNPYTTWTKLRHSNR TEDFFLELRQTHHLKENKPEISKWKTLHVVGCKQTLEKLKLGLILRESIDMDKELRMPKDRMLGEKVLNFSKSKHFKIPL EPYYQPEASLEFPQKMFIWTVNGTWITENQSYLNEKKGFCLEDIWLSED >Mature_209_residues MIPQSLLLKILISIFPIAIIIGNFYLFSITKDKIKAFTIQPPFLSFDFTNSYLSNKNSRISHLSDRNPYTTWTKLRHSNR TEDFFLELRQTHHLKENKPEISKWKTLHVVGCKQTLEKLKLGLILRESIDMDKELRMPKDRMLGEKVLNFSKSKHFKIPL EPYYQPEASLEFPQKMFIWTVNGTWITENQSYLNEKKGFCLEDIWLSED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24775; Mature: 24775
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPQSLLLKILISIFPIAIIIGNFYLFSITKDKIKAFTIQPPFLSFDFTNSYLSNKNSRI CCCHHHHHHHHHHHHHHHHHHHCEEEEEEEHHHEEEEEECCCEEEEECCHHHHCCCCCCH SHLSDRNPYTTWTKLRHSNRTEDFFLELRQTHHLKENKPEISKWKTLHVVGCKQTLEKLK HHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHCEEEEEECHHHHHHHHH LGLILRESIDMDKELRMPKDRMLGEKVLNFSKSKHFKIPLEPYYQPEASLEFPQKMFIWT HHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCEEEEEE VNGTWITENQSYLNEKKGFCLEDIWLSED ECCEEEECCHHHHHHCCCCEEEHEEECCC >Mature Secondary Structure MIPQSLLLKILISIFPIAIIIGNFYLFSITKDKIKAFTIQPPFLSFDFTNSYLSNKNSRI CCCHHHHHHHHHHHHHHHHHHHCEEEEEEEHHHEEEEEECCCEEEEECCHHHHCCCCCCH SHLSDRNPYTTWTKLRHSNRTEDFFLELRQTHHLKENKPEISKWKTLHVVGCKQTLEKLK HHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHCEEEEEECHHHHHHHHH LGLILRESIDMDKELRMPKDRMLGEKVLNFSKSKHFKIPLEPYYQPEASLEFPQKMFIWT HHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCEEEEEE VNGTWITENQSYLNEKKGFCLEDIWLSED ECCEEEECCHHHHHHCCCCEEEHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA