Click here to switch to the map view.

The map label for this gene is 116327364

Identifier: 116327364

GI number: 116327364

Start: 620096

End: 621685

Strand: Reverse

Name: 116327364

Synonym: LBL_0560

Alternate gene names: NA

Gene position: 621685-620096 (Counterclockwise)

Preceding gene: 116327371

Following gene: 116327363

Centisome position: 17.2

GC content: 39.31

Gene sequence:

>1590_bases
ATGATTTCGAAACTGAAAGCACTTCGGTTTTTCCAAAACAAATATTTTGCCGTCGCAGCCGCGTTTTTATTTTCGAATTT
TCTATATTTAACGATTCCTCCGAAATATCTTCTTTCCGCGGATCATTACGAAAAGTTTATCCTAGGAAAATCCATCTATC
TAAGCGGCTTTCGATCGTTAGACGTCTTTTATCCGGGATTTGACTTCGATCCGGAACTTAAATTCAGTCTGCTCCAGATG
TCGATCGTAAACGGTCACAAGATCATCGCCTTTCCAATTTCATTAGGAATCCTTTATGCGTTTGTTTTTCCTTTCGGAGG
AGTCTACGGAATCTATTTCCTATCCGCGTTCTTGATCGGGCTCGTTTTATTTATGATCGGAAAAGAATTCGAAATTCCGG
CCTGGCAAATCTTTTTATTTTCCTTTTTGTCGCCTGTGGTGATAAACGGTTATCTGTTTATGGATGTCGGAGTCGGATTG
TTTCTTTTTGTATCCGGAATCGTCCTGTATCAAAGATCCAAAAAGAATCGATCTTTTCTTTCCGCCGCCCTCGGAGGGAT
GGTATTGTCCCTCAGCTATTGGTTTCGTCTTGAATACCTGATCTTTATAGGACTTTATTGGATATGCGAAAGTTTTCTTC
GTCTTCCATTTTCGAAGGGAAACGAATATCATAAACGATTCTTTTTAACCTCGATCGTTCTTATAATTTTATTCTTCGGG
TATTGTGGATTCAACCAATCGTTTTTTCATTCTCCTTTGGGACCAAGATACAATGCGAACTATAGCCATTCGGGATTTTC
GAATCTATTTAAGAATTTTACAAATCTCCTATTTTACGGAAATATTAAGTTAGGCGTCTTCGGGTATTCTCCGTTTTTAT
TCGTAGGACTTTTATTTTTTCTATCCACTCAGGCAAGGAACTGGAAAAATATCCCGGAAAAGGAAAAACCGCTTCTGATC
TCCTCCGTCCTGGGGATCCTCACGGCCGCAATTGTGGCGCCCAACGACGGCGGAGCGGAATCCGGATCTCGTTATTTAAC
TCCGGGCCTCCCCGGACTATTCGTTCTTACATCAGGATTTTTTTCGTTTTTACGAACCCAAAAAATCCTTTGGAGAATTT
CATTCTACATTCTTCTTGCGACCTCAATTCTTCCGACTTGGATATACTACAAAACGACAAAGGGCTTTGCAAAAAACACA
AAAAAAGTTCAAGAGTTCATTCTCAAAGAACCCGAGGAAAATCTTTTGATTTTTCAGAACGGACTTATAGGAGGAATGGC
AAGCGAGGGCTTATATTTTCAAGGAAGAGTTTTTCAAGCGACGGGAGTTCCGGAATTAGTCGCACTACTCGAAAAATTTT
CCGCGTCCAAAAACATAAGTTCGGTTTCTTTTGAATACTTCGCGTATTCGAAAGAATATACGAAAGGAATGGAAAAATTA
CAATACGATCAAAATACGAAAGAAGGAATGATCGGACATTTAAACCGATTCGATTCCGAGGCGATTTCCGGAATTAAATC
CATTAAAATCGTAGACAAAAAAACGTTCGGGAATATGGAAATTTTCTACGGAATGTATAGAGAAAAATAA

Upstream 100 bases:

>100_bases
TTCGGACCCAAATAGGATCGTTTCTTTTTGTGACGAACTATGGGAAACGACCGATTTAAAGTTCCGTTTTGATTTTTAGA
ATTTTGGATTTCACAAATCA

Downstream 100 bases:

>100_bases
TCTACTTTAAAATTTTATAATTTTCTTGAATATAATTTCCATCACCTTTTTAAGGATGTCGCAAAAGTCGGCTTCAAATC
GACATTATTCATCAAGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MISKLKALRFFQNKYFAVAAAFLFSNFLYLTIPPKYLLSADHYEKFILGKSIYLSGFRSLDVFYPGFDFDPELKFSLLQM
SIVNGHKIIAFPISLGILYAFVFPFGGVYGIYFLSAFLIGLVLFMIGKEFEIPAWQIFLFSFLSPVVINGYLFMDVGVGL
FLFVSGIVLYQRSKKNRSFLSAALGGMVLSLSYWFRLEYLIFIGLYWICESFLRLPFSKGNEYHKRFFLTSIVLIILFFG
YCGFNQSFFHSPLGPRYNANYSHSGFSNLFKNFTNLLFYGNIKLGVFGYSPFLFVGLLFFLSTQARNWKNIPEKEKPLLI
SSVLGILTAAIVAPNDGGAESGSRYLTPGLPGLFVLTSGFFSFLRTQKILWRISFYILLATSILPTWIYYKTTKGFAKNT
KKVQEFILKEPEENLLIFQNGLIGGMASEGLYFQGRVFQATGVPELVALLEKFSASKNISSVSFEYFAYSKEYTKGMEKL
QYDQNTKEGMIGHLNRFDSEAISGIKSIKIVDKKTFGNMEIFYGMYREK

Sequences:

>Translated_529_residues
MISKLKALRFFQNKYFAVAAAFLFSNFLYLTIPPKYLLSADHYEKFILGKSIYLSGFRSLDVFYPGFDFDPELKFSLLQM
SIVNGHKIIAFPISLGILYAFVFPFGGVYGIYFLSAFLIGLVLFMIGKEFEIPAWQIFLFSFLSPVVINGYLFMDVGVGL
FLFVSGIVLYQRSKKNRSFLSAALGGMVLSLSYWFRLEYLIFIGLYWICESFLRLPFSKGNEYHKRFFLTSIVLIILFFG
YCGFNQSFFHSPLGPRYNANYSHSGFSNLFKNFTNLLFYGNIKLGVFGYSPFLFVGLLFFLSTQARNWKNIPEKEKPLLI
SSVLGILTAAIVAPNDGGAESGSRYLTPGLPGLFVLTSGFFSFLRTQKILWRISFYILLATSILPTWIYYKTTKGFAKNT
KKVQEFILKEPEENLLIFQNGLIGGMASEGLYFQGRVFQATGVPELVALLEKFSASKNISSVSFEYFAYSKEYTKGMEKL
QYDQNTKEGMIGHLNRFDSEAISGIKSIKIVDKKTFGNMEIFYGMYREK
>Mature_529_residues
MISKLKALRFFQNKYFAVAAAFLFSNFLYLTIPPKYLLSADHYEKFILGKSIYLSGFRSLDVFYPGFDFDPELKFSLLQM
SIVNGHKIIAFPISLGILYAFVFPFGGVYGIYFLSAFLIGLVLFMIGKEFEIPAWQIFLFSFLSPVVINGYLFMDVGVGL
FLFVSGIVLYQRSKKNRSFLSAALGGMVLSLSYWFRLEYLIFIGLYWICESFLRLPFSKGNEYHKRFFLTSIVLIILFFG
YCGFNQSFFHSPLGPRYNANYSHSGFSNLFKNFTNLLFYGNIKLGVFGYSPFLFVGLLFFLSTQARNWKNIPEKEKPLLI
SSVLGILTAAIVAPNDGGAESGSRYLTPGLPGLFVLTSGFFSFLRTQKILWRISFYILLATSILPTWIYYKTTKGFAKNT
KKVQEFILKEPEENLLIFQNGLIGGMASEGLYFQGRVFQATGVPELVALLEKFSASKNISSVSFEYFAYSKEYTKGMEKL
QYDQNTKEGMIGHLNRFDSEAISGIKSIKIVDKKTFGNMEIFYGMYREK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60368; Mature: 60368

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCEEHHHHCCC
>Mature Secondary Structure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HCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA