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The map label for this gene is 116327175

Identifier: 116327175

GI number: 116327175

Start: 414688

End: 415467

Strand: Reverse

Name: 116327175

Synonym: LBL_0354

Alternate gene names: NA

Gene position: 415467-414688 (Counterclockwise)

Preceding gene: 116327176

Following gene: 116327174

Centisome position: 11.49

GC content: 42.31

Gene sequence:

>780_bases
ATGGCTGTGCGTTGTTTTCGAGGTCAATTCGGAACCGATCAATTCCATGAAATGATGGAAGCGGGACTTTCCGAATATTT
GAATTTGCCCGGCAATATGGATTATTTTTTGCTTAGATTGTGTGAAGAAATAAAAAACGAAATGTGGCATGAGAAACTGG
ATGTTTCCGAACTCGTATCACAAATCCCTAATATATTTGAAGATTTGGATCTGCGCTATCCCGCAAAAAAAATCCGAATA
CTGGCGAAAGAGATAGCTTCGGCAGAAAAAACTCATCAAGCTCGTTCTCAAAGCGTGCGCGATCGAGTAGAACGGGGTTG
GGAGCATGTTCGAAAAGAAGAATATACTCAAGCGGAAGAATCGGTTCGATCCGCTCTTTCGGAATATCCGGAAGACGCAC
AGGCCTTGTATTTGGATACAAGGCTTTACCGACTGATTTCCGGCTCGGTGGAAGCGGGTCTCCAACGCGCCCAAAATAAT
TTAAAAAGAGCCGCAAAGTTTGATTCTTTCGGAATCGCTGCGCTTTACAATTTGATCGGATGTAGTTTCGAAGAGCTTTC
TCGCAATGAAGAAGCGATCCAAGCCATTGAAAAAGCGACCAAAATTGTCCCGAACGAATCGATGTATATAGCCAATCTTG
CAGAGATACATTGGAAAATCGGAAATAAACAAGCTGCAATCGAATACGCTCAAAAGGCGAAAAGATTGGGAAAAAAGTCC
GAGTTGATTGATGCGATACTCAAAGAGAGTGTAAATGCGAATCTACACAAAAACAATTAG

Upstream 100 bases:

>100_bases
CTTTTTACGTTCGAACGATCTGAACCATGAAGTGTATCAAAGCGACGATATTAACGCCCTTGTTGAAAAATGGGGATGGT
GTCAGGAAACTTTATCTTTA

Downstream 100 bases:

>100_bases
ATCTATGGAATAATCTCGTATTTCTGTCAGAACCTTCCACCAACAGGACCGGAGTAGAGCTGAACCTTTTGACACAGTAA
AATTGAATTTTGGGACACGT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MAVRCFRGQFGTDQFHEMMEAGLSEYLNLPGNMDYFLLRLCEEIKNEMWHEKLDVSELVSQIPNIFEDLDLRYPAKKIRI
LAKEIASAEKTHQARSQSVRDRVERGWEHVRKEEYTQAEESVRSALSEYPEDAQALYLDTRLYRLISGSVEAGLQRAQNN
LKRAAKFDSFGIAALYNLIGCSFEELSRNEEAIQAIEKATKIVPNESMYIANLAEIHWKIGNKQAAIEYAQKAKRLGKKS
ELIDAILKESVNANLHKNN

Sequences:

>Translated_259_residues
MAVRCFRGQFGTDQFHEMMEAGLSEYLNLPGNMDYFLLRLCEEIKNEMWHEKLDVSELVSQIPNIFEDLDLRYPAKKIRI
LAKEIASAEKTHQARSQSVRDRVERGWEHVRKEEYTQAEESVRSALSEYPEDAQALYLDTRLYRLISGSVEAGLQRAQNN
LKRAAKFDSFGIAALYNLIGCSFEELSRNEEAIQAIEKATKIVPNESMYIANLAEIHWKIGNKQAAIEYAQKAKRLGKKS
ELIDAILKESVNANLHKNN
>Mature_258_residues
AVRCFRGQFGTDQFHEMMEAGLSEYLNLPGNMDYFLLRLCEEIKNEMWHEKLDVSELVSQIPNIFEDLDLRYPAKKIRIL
AKEIASAEKTHQARSQSVRDRVERGWEHVRKEEYTQAEESVRSALSEYPEDAQALYLDTRLYRLISGSVEAGLQRAQNNL
KRAAKFDSFGIAALYNLIGCSFEELSRNEEAIQAIEKATKIVPNESMYIANLAEIHWKIGNKQAAIEYAQKAKRLGKKSE
LIDAILKESVNANLHKNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29729; Mature: 29598

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRCFRGQFGTDQFHEMMEAGLSEYLNLPGNMDYFLLRLCEEIKNEMWHEKLDVSELVS
CCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QIPNIFEDLDLRYPAKKIRILAKEIASAEKTHQARSQSVRDRVERGWEHVRKEEYTQAEE
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVRSALSEYPEDAQALYLDTRLYRLISGSVEAGLQRAQNNLKRAAKFDSFGIAALYNLIG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
CSFEELSRNEEAIQAIEKATKIVPNESMYIANLAEIHWKIGNKQAAIEYAQKAKRLGKKS
CCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
ELIDAILKESVNANLHKNN
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AVRCFRGQFGTDQFHEMMEAGLSEYLNLPGNMDYFLLRLCEEIKNEMWHEKLDVSELVS
CCEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QIPNIFEDLDLRYPAKKIRILAKEIASAEKTHQARSQSVRDRVERGWEHVRKEEYTQAEE
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVRSALSEYPEDAQALYLDTRLYRLISGSVEAGLQRAQNNLKRAAKFDSFGIAALYNLIG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
CSFEELSRNEEAIQAIEKATKIVPNESMYIANLAEIHWKIGNKQAAIEYAQKAKRLGKKS
CCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
ELIDAILKESVNANLHKNN
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA