Click here to switch to the map view.

The map label for this gene is ybaN [H]

Identifier: 116327152

GI number: 116327152

Start: 384960

End: 385376

Strand: Reverse

Name: ybaN [H]

Synonym: LBL_0328

Alternate gene names: 116327152

Gene position: 385376-384960 (Counterclockwise)

Preceding gene: 116327153

Following gene: 116327146

Centisome position: 10.66

GC content: 35.73

Gene sequence:

>417_bases
ATGGAGAAAAAAGACTATAGCGACGAAGTCCATCTGCATAGCTCGAAGATCGTTCGTTTTTTACTTTTTATTGCCGGTTC
TATTTCGTTAATTTTAGGGATCATCGGAATTTTTACACCGATTCTTCCGACAACCCCTTTTTTACTTTTATCTGCAGCGT
GTTATGCAAGAGCTTCCCATCAATTTTACAATTGGCTCATGAACAATCGGTACTTCGGTTCTTATATCCGCGATTGGAGG
ATTCATAAAACAATACCTATTAGAGCCAAAATCATCGCGATTTCCATGATTTTTTTGACGATTGGAACCACCGTATTTTT
TTTTATTCCAATTTTAGCAGTAAAAATTCTAGTTTCACTGATCGGAATTCTTGTAGTGATTTATTTGATTCGGATTCCTA
CAAAACCAAGAATCTAA

Upstream 100 bases:

>100_bases
GAAGCAGTAATTCCCACAAATTACGTCTCTCTGTGGAATTGATAGATATTTAATATTGTACTAGGAGGAGTATCCTAAGA
TTTTGGGACAAGTTTCTGAT

Downstream 100 bases:

>100_bases
ATTTTAGAAAAAGATCATAGACGTAAAATAAGACGTGAGAATCAAACGCATTATTTTTATTTTGAAAAACCTTACTCCCG
AATTATTTAGATTCGAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MEKKDYSDEVHLHSSKIVRFLLFIAGSISLILGIIGIFTPILPTTPFLLLSAACYARASHQFYNWLMNNRYFGSYIRDWR
IHKTIPIRAKIIAISMIFLTIGTTVFFFIPILAVKILVSLIGILVVIYLIRIPTKPRI

Sequences:

>Translated_138_residues
MEKKDYSDEVHLHSSKIVRFLLFIAGSISLILGIIGIFTPILPTTPFLLLSAACYARASHQFYNWLMNNRYFGSYIRDWR
IHKTIPIRAKIIAISMIFLTIGTTVFFFIPILAVKILVSLIGILVVIYLIRIPTKPRI
>Mature_138_residues
MEKKDYSDEVHLHSSKIVRFLLFIAGSISLILGIIGIFTPILPTTPFLLLSAACYARASHQFYNWLMNNRYFGSYIRDWR
IHKTIPIRAKIIAISMIFLTIGTTVFFFIPILAVKILVSLIGILVVIYLIRIPTKPRI

Specific function: Unknown

COG id: COG2832

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786674, Length=116, Percent_Identity=39.6551724137931, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007401 [H]

Pfam domain/function: PF04304 DUF454 [H]

EC number: NA

Molecular weight: Translated: 15824; Mature: 15824

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKDYSDEVHLHSSKIVRFLLFIAGSISLILGIIGIFTPILPTTPFLLLSAACYARASH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QFYNWLMNNRYFGSYIRDWRIHKTIPIRAKIIAISMIFLTIGTTVFFFIPILAVKILVSL
HHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGILVVIYLIRIPTKPRI
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEKKDYSDEVHLHSSKIVRFLLFIAGSISLILGIIGIFTPILPTTPFLLLSAACYARASH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QFYNWLMNNRYFGSYIRDWRIHKTIPIRAKIIAISMIFLTIGTTVFFFIPILAVKILVSL
HHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGILVVIYLIRIPTKPRI
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]