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The map label for this gene is flgC [H]

Identifier: 116327145

GI number: 116327145

Start: 378776

End: 379237

Strand: Reverse

Name: flgC [H]

Synonym: LBL_0321

Alternate gene names: 116327145

Gene position: 379237-378776 (Counterclockwise)

Preceding gene: 116327146

Following gene: 116327144

Centisome position: 10.49

GC content: 45.24

Gene sequence:

>462_bases
ATGGGACTTTTTTCATCGATCAATATTTCCGCAACCGGTTTATCCGCTCAAAGACTCAGAATGGATGTTATTTCCAATAA
CATCGCAAACTCGACCACGACTCGAAATACAAACGGGGATGGTCCATTTAGAAGAGATCGAGTCGTGATGACTCCGATCA
ATTTGAGGACCAGATGGAGAAGTCCGGTTTACCCGTTCGGAGTCGCTCCCGGAGAAGGCAAGGGTGTGAAGGTAATGAAA
ATAGAAAAGGACATGACCCCTCTTCGATTGGTTTATGATCCGACGCACCCGGACGCGATTCAGATCGGTCCTAAGAAAGG
TTATGTGGAAATGCCGAACGTTAACATTGTTACCGAAATGACAGATATGATCTCGGCTTCCAGATCTTACGAAGCGAACG
TTCAAATGATCAACGGATCCAAAGCGATGTTCAATAAGGCGTTGGAAATAGGTAGAGCTTAA

Upstream 100 bases:

>100_bases
ACAGAGATCTAAAACAGGTTATGAGAATGGCTTAAAAGTCTGGATTGAATCTTCTCTCATCCATTTTAATGAGGCATAAT
TTTACTTTTTAGGAAGCAGC

Downstream 100 bases:

>100_bases
TCATGGAAATCAATTCTAATTCCTCTCTTTGGTATACATATAACTCCGGTTATACGGGAAACAAACCTCATCCACTCAGT
CCGAAAGGCGACAAGGTGAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MGLFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTRWRSPVYPFGVAPGEGKGVKVMK
IEKDMTPLRLVYDPTHPDAIQIGPKKGYVEMPNVNIVTEMTDMISASRSYEANVQMINGSKAMFNKALEIGRA

Sequences:

>Translated_153_residues
MGLFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTRWRSPVYPFGVAPGEGKGVKVMK
IEKDMTPLRLVYDPTHPDAIQIGPKKGYVEMPNVNIVTEMTDMISASRSYEANVQMINGSKAMFNKALEIGRA
>Mature_152_residues
GLFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTRWRSPVYPFGVAPGEGKGVKVMKI
EKDMTPLRLVYDPTHPDAIQIGPKKGYVEMPNVNIVTEMTDMISASRSYEANVQMINGSKAMFNKALEIGRA

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=153, Percent_Identity=35.9477124183007, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16905; Mature: 16774

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTRWR
CCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCC
SPVYPFGVAPGEGKGVKVMKIEKDMTPLRLVYDPTHPDAIQIGPKKGYVEMPNVNIVTEM
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEECCCCCEEECCCCEEEHHH
TDMISASRSYEANVQMINGSKAMFNKALEIGRA
HHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCC
>Mature Secondary Structure 
GLFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTRWR
CCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCC
SPVYPFGVAPGEGKGVKVMKIEKDMTPLRLVYDPTHPDAIQIGPKKGYVEMPNVNIVTEM
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEECCCCCEEECCCCEEEHHH
TDMISASRSYEANVQMINGSKAMFNKALEIGRA
HHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]