| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327121
Identifier: 116327121
GI number: 116327121
Start: 352282
End: 353298
Strand: Reverse
Name: 116327121
Synonym: LBL_0297
Alternate gene names: NA
Gene position: 353298-352282 (Counterclockwise)
Preceding gene: 116327130
Following gene: 116327120
Centisome position: 9.77
GC content: 38.15
Gene sequence:
>1017_bases ATGAGTTCCAATCAGGTTTATACACTTCAATTCATTTCAAGAGATACGCCTTCATCCATTTATATTTTATTTACGAGCGT TATCGATATACAACAAGCAAAGATGGAGAAACTCGAAGTCATAGCAGTTGGGCAAGTGGAAAATTTAGGATCCGTTCAAC TCTCCGTTTCAACCCATAAAGACATTGTAAAACTTTGCCAAAAACTGAAATACGAAGGTAAACAACTTAAGAGCCTCACG AATAAATTAACCGAGCTTTTTCAGACGAACGGCAAGTCGGATGACTTTATGGAACAATTGATTCACTACTTTAATAGCGA GGACAACGATCAAATCAAATATATTCTTAATCAAGTAATCAACCAGGCTGCAGGAAACTCAAAACCCGATATTCAATTTT TTTATACTATTCTGGATCGATCGAGACTGAATGAAGAAAGCCAAGAAAGTCTTTTAGAAGATGCTTCTTCCGAAGAAGTA GATGAAGATCTTCCACCTTTAGAACCAACTTCGTTCGAAGCAAAAAAAGCAGTGGAGACTTTGGAAAAATTTATTCCTTC GGGCTCTAGAGTCATTCCGATGAAATACGTTCTTTCTCCCGTTTCCGGAATTCAGATTAGCACTCTAAAACCCGGAGACA AGATCATGATCCAATTATTAAAATCAGATTCTTCTTCTCAAAGTATCATCGAATCGATGAAATTGGAAACTCCGGAAGGA CAAATCCGCCCTTTACCCGGAACCGTTGTAGCCTCTAAAAACAACGGAGTCGAAAACGAAACCGTCATTCAAATCGGTTC AGATGTATTCGGAAAAATTTATGAAGAAGAAAATTCGATTAAGGTCCGACCTTATTCGGGGGAAAAACCGGCCTTGATCG AAGAGAAACGCTCCCTTTCTAAAAGTTCTTCACGAGGTTCCAAAACTTCCGAGGATTCAGGATTATTGATTACGATCTTA ATCGCGCTTGGAGTTTTGGGAATTGCCATGACGGCAATTTTTTTATTTCTTTTTTAA
Upstream 100 bases:
>100_bases TGAAATCCTTCCTTAGTTTGACAATTCTCTGAATCCGAACCAGAATGTCAAAAATAAAGAAGAAAGTTTCTCAAACGTAG ACCCTTTAAATTAAAAATAC
Downstream 100 bases:
>100_bases TAAAGTCAAATCATGAAAACAAAATTAGCTCAGATTATTCCCTTTATCATTCTATCCTTTTGTATTATTAACATGTCTTT CGAACCGATCTTTTACGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSSNQVYTLQFISRDTPSSIYILFTSVIDIQQAKMEKLEVIAVGQVENLGSVQLSVSTHKDIVKLCQKLKYEGKQLKSLT NKLTELFQTNGKSDDFMEQLIHYFNSEDNDQIKYILNQVINQAAGNSKPDIQFFYTILDRSRLNEESQESLLEDASSEEV DEDLPPLEPTSFEAKKAVETLEKFIPSGSRVIPMKYVLSPVSGIQISTLKPGDKIMIQLLKSDSSSQSIIESMKLETPEG QIRPLPGTVVASKNNGVENETVIQIGSDVFGKIYEEENSIKVRPYSGEKPALIEEKRSLSKSSSRGSKTSEDSGLLITIL IALGVLGIAMTAIFLFLF
Sequences:
>Translated_338_residues MSSNQVYTLQFISRDTPSSIYILFTSVIDIQQAKMEKLEVIAVGQVENLGSVQLSVSTHKDIVKLCQKLKYEGKQLKSLT NKLTELFQTNGKSDDFMEQLIHYFNSEDNDQIKYILNQVINQAAGNSKPDIQFFYTILDRSRLNEESQESLLEDASSEEV DEDLPPLEPTSFEAKKAVETLEKFIPSGSRVIPMKYVLSPVSGIQISTLKPGDKIMIQLLKSDSSSQSIIESMKLETPEG QIRPLPGTVVASKNNGVENETVIQIGSDVFGKIYEEENSIKVRPYSGEKPALIEEKRSLSKSSSRGSKTSEDSGLLITIL IALGVLGIAMTAIFLFLF >Mature_337_residues SSNQVYTLQFISRDTPSSIYILFTSVIDIQQAKMEKLEVIAVGQVENLGSVQLSVSTHKDIVKLCQKLKYEGKQLKSLTN KLTELFQTNGKSDDFMEQLIHYFNSEDNDQIKYILNQVINQAAGNSKPDIQFFYTILDRSRLNEESQESLLEDASSEEVD EDLPPLEPTSFEAKKAVETLEKFIPSGSRVIPMKYVLSPVSGIQISTLKPGDKIMIQLLKSDSSSQSIIESMKLETPEGQ IRPLPGTVVASKNNGVENETVIQIGSDVFGKIYEEENSIKVRPYSGEKPALIEEKRSLSKSSSRGSKTSEDSGLLITILI ALGVLGIAMTAIFLFLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37560; Mature: 37429
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNQVYTLQFISRDTPSSIYILFTSVIDIQQAKMEKLEVIAVGQVENLGSVQLSVSTHK CCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEECHHH DIVKLCQKLKYEGKQLKSLTNKLTELFQTNGKSDDFMEQLIHYFNSEDNDQIKYILNQVI HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH NQAAGNSKPDIQFFYTILDRSRLNEESQESLLEDASSEEVDEDLPPLEPTSFEAKKAVET HHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHH LEKFIPSGSRVIPMKYVLSPVSGIQISTLKPGDKIMIQLLKSDSSSQSIIESMKLETPEG HHHHCCCCCEEEEHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCC QIRPLPGTVVASKNNGVENETVIQIGSDVFGKIYEEENSIKVRPYSGEKPALIEEKRSLS CEECCCCEEEECCCCCCCCCCEEEECHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHH KSSSRGSKTSEDSGLLITILIALGVLGIAMTAIFLFLF HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SSNQVYTLQFISRDTPSSIYILFTSVIDIQQAKMEKLEVIAVGQVENLGSVQLSVSTHK CCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEECHHH DIVKLCQKLKYEGKQLKSLTNKLTELFQTNGKSDDFMEQLIHYFNSEDNDQIKYILNQVI HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH NQAAGNSKPDIQFFYTILDRSRLNEESQESLLEDASSEEVDEDLPPLEPTSFEAKKAVET HHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHH LEKFIPSGSRVIPMKYVLSPVSGIQISTLKPGDKIMIQLLKSDSSSQSIIESMKLETPEG HHHHCCCCCEEEEHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCC QIRPLPGTVVASKNNGVENETVIQIGSDVFGKIYEEENSIKVRPYSGEKPALIEEKRSLS CEECCCCEEEECCCCCCCCCCEEEECHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHH KSSSRGSKTSEDSGLLITILIALGVLGIAMTAIFLFLF HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA