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The map label for this gene is ywmC [H]

Identifier: 116327069

GI number: 116327069

Start: 291597

End: 292736

Strand: Reverse

Name: ywmC [H]

Synonym: LBL_0242

Alternate gene names: 116327069

Gene position: 292736-291597 (Counterclockwise)

Preceding gene: 116327070

Following gene: 116327063

Centisome position: 8.1

GC content: 38.42

Gene sequence:

>1140_bases
ATGCGATTTTTTTCAAAAGGCGCTTTCGATTTATTTCTTGAGACTCATTCCAACGCTCAAGGTATTTCATATATTAAATT
TACGAACCGAAAAATCGGACATCGCATATACTCACAAAAAATCTTAAATCTTATCGGGCTTATCCTTCTTTTTCTATTAA
CGGGAACGCACATCGCTTCCGAAAACCACGAACGGTCTAAATTGTTTATCGTAGACGCCTCCGGATCGATGAACGAATAT
CTGGGGATTTATCAAAAAATTCATTTAGCAAAAAAACACGTTAGTCGCTATATTTCTACTCTTCCTACAGAAACGGAAAT
AGGATTTATAGCGTACGGCAATCGAATTCCGGGTTGTTCTTCCTCCCGTTTATACGAACCCTTACAAAGGGAAAATCACG
GCACGTTCAAAAATCGTCTTTTCAGCTTAACACCTTCTGGTGCAACTCCTCTCGCGGAATCGATTCGAATTGCGGGAAAC
TTGATTTCGCAAAGAAAAAAAGAAACCGAAATCATCCTAATCACGGACGGAGTGGAAAGTTGTTACGGCGATCCCAAAAA
AGAACTCCAAGCGTTAAAACAACAAGGCATCTATTTTAAATTTCATATCCTCGGCTTAGGTTTGAAGCCTGATGAAGAAC
GAAAGATGAAAATTCTCGCCGAAGAAGGGAACGGAAAATATTTCGGAATCGAAGACGATTCTTCTTTTTATACGGCTCTT
GATTCCCTTAAAAATCAAACCGTTCCCATCATTGAAAAAAACCGTAAGGATTCGCTCCGAGAACCTAACGGCGATTTAAT
GGTTTGGTTTGAAAAAATCCGTAAAAATCAAGAATCCGATTCTAAAATTACCTATACGATCGACTTCGGCTTTAAAACTA
GGAACAATCTTAAAAGTTGCGTTGTGTTTAATCTAAAACAGAAAGGAAATTCTTCCCGTCAAAGTTTAGGCCCGAAAAGA
ATCCTATCTCCCGAAAATCTAATCTTCAGTGAAAGTTCCTGCTTTGATGTTTCCGAAAGTAAAGGAACAATTACAATTGA
AATTCCAAAACGAACTTCTTTAATCGGAGTTTTGGAACTTTGGGACATGGTCGGAATACCTTCCCCCCTTGGAATTTCGA
ATGAAGAGGAATTTCATTAG

Upstream 100 bases:

>100_bases
AGAAAAAAAAGGGAAACAATTCCTTTCCCGATTGATCTTTTGGAATCTTTGATCCTTTCCTATTATAGCTTTTCGGAGAA
AGTCCGATAAAAACCCTAAC

Downstream 100 bases:

>100_bases
ACGTTACAGGTTTAGGTCGAATTCGGCGGGAAAGCTGACCTTATATTTGAGTTTGATCTCTTGTTTTTGACTCGGCCTCA
AATCCAGTTTCCATTCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MRFFSKGAFDLFLETHSNAQGISYIKFTNRKIGHRIYSQKILNLIGLILLFLLTGTHIASENHERSKLFIVDASGSMNEY
LGIYQKIHLAKKHVSRYISTLPTETEIGFIAYGNRIPGCSSSRLYEPLQRENHGTFKNRLFSLTPSGATPLAESIRIAGN
LISQRKKETEIILITDGVESCYGDPKKELQALKQQGIYFKFHILGLGLKPDEERKMKILAEEGNGKYFGIEDDSSFYTAL
DSLKNQTVPIIEKNRKDSLREPNGDLMVWFEKIRKNQESDSKITYTIDFGFKTRNNLKSCVVFNLKQKGNSSRQSLGPKR
ILSPENLIFSESSCFDVSESKGTITIEIPKRTSLIGVLELWDMVGIPSPLGISNEEEFH

Sequences:

>Translated_379_residues
MRFFSKGAFDLFLETHSNAQGISYIKFTNRKIGHRIYSQKILNLIGLILLFLLTGTHIASENHERSKLFIVDASGSMNEY
LGIYQKIHLAKKHVSRYISTLPTETEIGFIAYGNRIPGCSSSRLYEPLQRENHGTFKNRLFSLTPSGATPLAESIRIAGN
LISQRKKETEIILITDGVESCYGDPKKELQALKQQGIYFKFHILGLGLKPDEERKMKILAEEGNGKYFGIEDDSSFYTAL
DSLKNQTVPIIEKNRKDSLREPNGDLMVWFEKIRKNQESDSKITYTIDFGFKTRNNLKSCVVFNLKQKGNSSRQSLGPKR
ILSPENLIFSESSCFDVSESKGTITIEIPKRTSLIGVLELWDMVGIPSPLGISNEEEFH
>Mature_379_residues
MRFFSKGAFDLFLETHSNAQGISYIKFTNRKIGHRIYSQKILNLIGLILLFLLTGTHIASENHERSKLFIVDASGSMNEY
LGIYQKIHLAKKHVSRYISTLPTETEIGFIAYGNRIPGCSSSRLYEPLQRENHGTFKNRLFSLTPSGATPLAESIRIAGN
LISQRKKETEIILITDGVESCYGDPKKELQALKQQGIYFKFHILGLGLKPDEERKMKILAEEGNGKYFGIEDDSSFYTAL
DSLKNQTVPIIEKNRKDSLREPNGDLMVWFEKIRKNQESDSKITYTIDFGFKTRNNLKSCVVFNLKQKGNSSRQSLGPKR
ILSPENLIFSESSCFDVSESKGTITIEIPKRTSLIGVLELWDMVGIPSPLGISNEEEFH

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywmD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 42932; Mature: 42932

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFSKGAFDLFLETHSNAQGISYIKFTNRKIGHRIYSQKILNLIGLILLFLLTGTHIAS
CCCCCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
ENHERSKLFIVDASGSMNEYLGIYQKIHLAKKHVSRYISTLPTETEIGFIAYGNRIPGCS
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
SSRLYEPLQRENHGTFKNRLFSLTPSGATPLAESIRIAGNLISQRKKETEIILITDGVES
CHHHHHHHHHCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
CYGDPKKELQALKQQGIYFKFHILGLGLKPDEERKMKILAEEGNGKYFGIEDDSSFYTAL
HHCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHH
DSLKNQTVPIIEKNRKDSLREPNGDLMVWFEKIRKNQESDSKITYTIDFGFKTRNNLKSC
HHHCCCCCCEEECCCCHHCCCCCCCEEEEEHHHHCCCCCCCEEEEEEEECCCCCCCCCEE
VVFNLKQKGNSSRQSLGPKRILSPENLIFSESSCFDVSESKGTITIEIPKRTSLIGVLEL
EEEEEHHCCCCCHHHCCCHHCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHH
WDMVGIPSPLGISNEEEFH
HHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFFSKGAFDLFLETHSNAQGISYIKFTNRKIGHRIYSQKILNLIGLILLFLLTGTHIAS
CCCCCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
ENHERSKLFIVDASGSMNEYLGIYQKIHLAKKHVSRYISTLPTETEIGFIAYGNRIPGCS
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
SSRLYEPLQRENHGTFKNRLFSLTPSGATPLAESIRIAGNLISQRKKETEIILITDGVES
CHHHHHHHHHCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
CYGDPKKELQALKQQGIYFKFHILGLGLKPDEERKMKILAEEGNGKYFGIEDDSSFYTAL
HHCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHH
DSLKNQTVPIIEKNRKDSLREPNGDLMVWFEKIRKNQESDSKITYTIDFGFKTRNNLKSC
HHHCCCCCCEEECCCCHHCCCCCCCEEEEEHHHHCCCCCCCEEEEEEEECCCCCCCCCEE
VVFNLKQKGNSSRQSLGPKRILSPENLIFSESSCFDVSESKGTITIEIPKRTSLIGVLEL
EEEEEHHCCCCCHHHCCCHHCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHH
WDMVGIPSPLGISNEEEFH
HHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]