Click here to switch to the map view.

The map label for this gene is 116327022

Identifier: 116327022

GI number: 116327022

Start: 229332

End: 229670

Strand: Direct

Name: 116327022

Synonym: LBL_0195

Alternate gene names: NA

Gene position: 229332-229670 (Clockwise)

Preceding gene: 116327017

Following gene: 116327023

Centisome position: 6.34

GC content: 36.58

Gene sequence:

>339_bases
ATGGAAATAACCGTACAAGACGATATTCATATCATAAAAATTGCAGGATCCATTCTTCAATCAGACAGCGAAGAATTGGA
CCGAAACTTAAGTGAGCACAATTTCGATCCAAGTCCGAGAATTATCATCGATTTGACGGAAGTGAATCATATCTGTTCTA
CCGCGCTAGGTATTATTGTTTCTTATAAAAAGAAATTTAAAAGTGCGGAAGGTGATATCATCATTGTAGTCAATGACGAG
GACCTTTTGCAGCTTTTTGAGATCACGATGTTGGATAAGGTTTTTAAAATAGTTCCTAATATCGAAGACGCGTTCGACGA
ATTTAAGTTGAATCGCTGA

Upstream 100 bases:

>100_bases
AAAAGTCGAATTCTCAAAAAACGCACTAAAAATCCGATTCAAATTTCGTTTTTTTGTTGAAAAACAAAATTCAAACGGCC
ACAGAAGTAACGGGACAACC

Downstream 100 bases:

>100_bases
TCTCTTTTTGAAACGAATCGTTCTTGCCACAAACAATCGGTACAAAGTAAAGGAAGTCGGTTTTATTCTTTCCGAGTTAG
GAATTCAGGTCCTTACTCCT

Product: anti-sigma factor antagonist

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MEITVQDDIHIIKIAGSILQSDSEELDRNLSEHNFDPSPRIIIDLTEVNHICSTALGIIVSYKKKFKSAEGDIIIVVNDE
DLLQLFEITMLDKVFKIVPNIEDAFDEFKLNR

Sequences:

>Translated_112_residues
MEITVQDDIHIIKIAGSILQSDSEELDRNLSEHNFDPSPRIIIDLTEVNHICSTALGIIVSYKKKFKSAEGDIIIVVNDE
DLLQLFEITMLDKVFKIVPNIEDAFDEFKLNR
>Mature_112_residues
MEITVQDDIHIIKIAGSILQSDSEELDRNLSEHNFDPSPRIIIDLTEVNHICSTALGIIVSYKKKFKSAEGDIIIVVNDE
DLLQLFEITMLDKVFKIVPNIEDAFDEFKLNR

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12787; Mature: 12787

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITVQDDIHIIKIAGSILQSDSEELDRNLSEHNFDPSPRIIIDLTEVNHICSTALGIIV
CEEEECCCEEEEEEHHHHHCCCHHHHHCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHH
SYKKKFKSAEGDIIIVVNDEDLLQLFEITMLDKVFKIVPNIEDAFDEFKLNR
HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
>Mature Secondary Structure
MEITVQDDIHIIKIAGSILQSDSEELDRNLSEHNFDPSPRIIIDLTEVNHICSTALGIIV
CEEEECCCEEEEEEHHHHHCCCHHHHHCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHH
SYKKKFKSAEGDIIIVVNDEDLLQLFEITMLDKVFKIVPNIEDAFDEFKLNR
HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA