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The map label for this gene is 116327014

Identifier: 116327014

GI number: 116327014

Start: 216416

End: 218155

Strand: Direct

Name: 116327014

Synonym: LBL_0185

Alternate gene names: NA

Gene position: 216416-218155 (Clockwise)

Preceding gene: 116327011

Following gene: 116327017

Centisome position: 5.99

GC content: 42.93

Gene sequence:

>1740_bases
ATGAGTTTAGATTCGACCTTAAAAAGGAAAGAAATTCTTTATGACTACGATTATATCATAGTCGGCTCAGGTTTTGGAGG
ATGTGTCTCCGCACTTCGGCTTTCGCAAAAGGGATATAAGGTGGCTGTTTTAGAATCAGGGAAACGATGGAACAGTTCCG
AATTCCCCAAAACTAATTGGAATTTACGCAAGTTTCTTTGGTTTCCGAAACTTTTTTGTTTTGGAATTCAAAGAATCAAC
TTTCTAAACGACGTAATGGTTTTGAGTGGTGCGGGAGTGGGAGGCGGAAGTCTTGTTTATGCGAATACGTTGTATGTTCC
TCCCGAGCCATTTTGGAAAAAGGAAATCGTCCAAAAAATGGGAGGAAAAAAAGGGATCCTTCCCTTCTACGAACTTGCGA
AGAAAATGTTAGGCGTCGTGGAAAATCCGAAGACTTGGGAATCGGATCGGTATATGCAGGAAACTGCAAAAACTTTCGGA
ATTGAAAACACATTTAACAAAACTCCGGTAGGAGTTCACTTCGGTAAAAACGGCATCGATCCTTTTTTCGGAGGAGAAGG
GCCGGAGAGAAATTCCTGCAACGATTGCGGCGGTTGTATGGTCGGTTGTCGTTATAACGCAAAGAATACCCTTGATAAGA
ATTATCTTTATTTTGCGGAGAAGGCGGGAGCGGTTATTTTTCCGGAAACAAAAGTTTCCAAGCTAGCGCCGTTAGGCGAA
GACGGTTCGGAAGGTTATGAAGTTCATACCGAGAAAACGACTTCTTTGTTCGGTTATCCCAAAAAAATCTATAAAGTAAA
ATCCGTTGTTCTTTCCGCCGGAGTTTTGGGAACCTTGGGTCTTCTTTTAAAGATGAAAGAAGAAGGAATTCTTCCTAAAC
TTTCCAAACAGTTAGGACAAGTCGTTCGAACCAACAGTGAGTCGTTAATCGGAGTGACACTCAAAGACAAGAAAGCGGAT
TTATCCCACGGGATTGCAATCACTTCCAGCGTTTTTCCGGATGAACATACTCACATAGAGCCGGTTCGTTATTCGGACGG
GGCAGACGCTATGAATAGTTTAGCTGCAGGGGTTCTCGTGGACGGAGGGGGAAGCATTCCGAGACAACTGCGATTTTTGA
TTGAAGTGCTAAAACATCCGATCCATAGTGTTAGCCTGTTGAACCCTATCGGGTTTGCAAGAAGGACAATCATTCTACTT
GTAATGCAAACTGTGGACAATAGCATCGAGATTGTTCGTAAGAGAAGATGGATCTGGCCGTTCAAGAGAACCCTTTCTTC
CACTCAGGAAAGCGGAGAAAAAATTCCTACCTATATCCCGATTGCAAACGAATTTGCGAAAAGGCTGGCTAAGATTTCGG
GAGGGATCGCAAGAAGTAGTATCAACGAGGCCTTGTTGGATATTCCGGCTACCGCACATATATTAGGAGGGTGTAATATA
GGAGAGAGTTCCGAAACAGGTGTGATTGATCTTCAAAATAAGGTTTATGGCTACCAGAATCTTAGGATTTGTGATGGTTC
TATGATTCCAGCTAATTTGGGTGTCAATCCGAGTCTTACGATCACGGCTCTTACGGAAAGAGCGATGTCCTTTGTGGCTC
CGAAAGAGAAGGAAATATTTAACTTTAAATTCGAAAAAAAATGGGGTGTTATCGGTCTTTTCGGTAAGGTAAAAAACGCC
GCAATTACGACCGGGGCCCGTAAGAATAAACCGACCCCAAGAGCAAAAAACAAAAGATAG

Upstream 100 bases:

>100_bases
TTTTACTTTGAAAAAACCGGTTCGAAGAATTTTGGCTTTCCATTTATGGGAAATAAAAGATTTTAAGCCACTAAAAAACT
TCGATAGGACTGGACTGCAT

Downstream 100 bases:

>100_bases
TTAAAATATTCCAAAATTCAAATATTTTCGGAAAGCCGTAGATTTATTTTCCGCGGATTTCCGAAAAATTTGGATCTTAT
TTGAGTTTCTCTTCGATTAA

Product: oxidoreductase

Products: NA

Alternate protein names: Glucose-Methanol-Choline Oxidoreductase; FAD Dependent Oxidoreductase; GMC Oxidoreductase; Oxidoreductase; Choline Dehydrogenase; Oxidase; Cholesterol Oxidase ChoD; Choline Dehydrogenase-Like Flavoprotein; Cholesterol-O2 Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; GMC Oxidoreductase Family Protein; Cholesterol Oxidase Chod; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Gmc Oxidoreductase Family Protein; GMC Oxidoreductase Family; Ferredoxin Domain Gmc Oxidoreductase; Choline Dehydrogenase And Related Flavoprotein-Like Protein; Cholesterol Oxidase ChoD

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MSLDSTLKRKEILYDYDYIIVGSGFGGCVSALRLSQKGYKVAVLESGKRWNSSEFPKTNWNLRKFLWFPKLFCFGIQRIN
FLNDVMVLSGAGVGGGSLVYANTLYVPPEPFWKKEIVQKMGGKKGILPFYELAKKMLGVVENPKTWESDRYMQETAKTFG
IENTFNKTPVGVHFGKNGIDPFFGGEGPERNSCNDCGGCMVGCRYNAKNTLDKNYLYFAEKAGAVIFPETKVSKLAPLGE
DGSEGYEVHTEKTTSLFGYPKKIYKVKSVVLSAGVLGTLGLLLKMKEEGILPKLSKQLGQVVRTNSESLIGVTLKDKKAD
LSHGIAITSSVFPDEHTHIEPVRYSDGADAMNSLAAGVLVDGGGSIPRQLRFLIEVLKHPIHSVSLLNPIGFARRTIILL
VMQTVDNSIEIVRKRRWIWPFKRTLSSTQESGEKIPTYIPIANEFAKRLAKISGGIARSSINEALLDIPATAHILGGCNI
GESSETGVIDLQNKVYGYQNLRICDGSMIPANLGVNPSLTITALTERAMSFVAPKEKEIFNFKFEKKWGVIGLFGKVKNA
AITTGARKNKPTPRAKNKR

Sequences:

>Translated_579_residues
MSLDSTLKRKEILYDYDYIIVGSGFGGCVSALRLSQKGYKVAVLESGKRWNSSEFPKTNWNLRKFLWFPKLFCFGIQRIN
FLNDVMVLSGAGVGGGSLVYANTLYVPPEPFWKKEIVQKMGGKKGILPFYELAKKMLGVVENPKTWESDRYMQETAKTFG
IENTFNKTPVGVHFGKNGIDPFFGGEGPERNSCNDCGGCMVGCRYNAKNTLDKNYLYFAEKAGAVIFPETKVSKLAPLGE
DGSEGYEVHTEKTTSLFGYPKKIYKVKSVVLSAGVLGTLGLLLKMKEEGILPKLSKQLGQVVRTNSESLIGVTLKDKKAD
LSHGIAITSSVFPDEHTHIEPVRYSDGADAMNSLAAGVLVDGGGSIPRQLRFLIEVLKHPIHSVSLLNPIGFARRTIILL
VMQTVDNSIEIVRKRRWIWPFKRTLSSTQESGEKIPTYIPIANEFAKRLAKISGGIARSSINEALLDIPATAHILGGCNI
GESSETGVIDLQNKVYGYQNLRICDGSMIPANLGVNPSLTITALTERAMSFVAPKEKEIFNFKFEKKWGVIGLFGKVKNA
AITTGARKNKPTPRAKNKR
>Mature_578_residues
SLDSTLKRKEILYDYDYIIVGSGFGGCVSALRLSQKGYKVAVLESGKRWNSSEFPKTNWNLRKFLWFPKLFCFGIQRINF
LNDVMVLSGAGVGGGSLVYANTLYVPPEPFWKKEIVQKMGGKKGILPFYELAKKMLGVVENPKTWESDRYMQETAKTFGI
ENTFNKTPVGVHFGKNGIDPFFGGEGPERNSCNDCGGCMVGCRYNAKNTLDKNYLYFAEKAGAVIFPETKVSKLAPLGED
GSEGYEVHTEKTTSLFGYPKKIYKVKSVVLSAGVLGTLGLLLKMKEEGILPKLSKQLGQVVRTNSESLIGVTLKDKKADL
SHGIAITSSVFPDEHTHIEPVRYSDGADAMNSLAAGVLVDGGGSIPRQLRFLIEVLKHPIHSVSLLNPIGFARRTIILLV
MQTVDNSIEIVRKRRWIWPFKRTLSSTQESGEKIPTYIPIANEFAKRLAKISGGIARSSINEALLDIPATAHILGGCNIG
ESSETGVIDLQNKVYGYQNLRICDGSMIPANLGVNPSLTITALTERAMSFVAPKEKEIFNFKFEKKWGVIGLFGKVKNAA
ITTGARKNKPTPRAKNKR

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63814; Mature: 63683

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDSTLKRKEILYDYDYIIVGSGFGGCVSALRLSQKGYKVAVLESGKRWNSSEFPKTNW
CCCCHHHHHHHHEEECCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
NLRKFLWFPKLFCFGIQRINFLNDVMVLSGAGVGGGSLVYANTLYVPPEPFWKKEIVQKM
CHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHC
GGKKGILPFYELAKKMLGVVENPKTWESDRYMQETAKTFGIENTFNKTPVGVHFGKNGID
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCC
PFFGGEGPERNSCNDCGGCMVGCRYNAKNTLDKNYLYFAEKAGAVIFPETKVSKLAPLGE
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEECCCHHHHHCCCCC
DGSEGYEVHTEKTTSLFGYPKKIYKVKSVVLSAGVLGTLGLLLKMKEEGILPKLSKQLGQ
CCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VVRTNSESLIGVTLKDKKADLSHGIAITSSVFPDEHTHIEPVRYSDGADAMNSLAAGVLV
HHHCCCCCEEEEEECCCCCCHHCCEEEEECCCCCCCCCCCCEEECCCHHHHHHHHCCEEE
DGGGSIPRQLRFLIEVLKHPIHSVSLLNPIGFARRTIILLVMQTVDNSIEIVRKRRWIWP
ECCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCH
FKRTLSSTQESGEKIPTYIPIANEFAKRLAKISGGIARSSINEALLDIPATAHILGGCNI
HHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHEEECCCC
GESSETGVIDLQNKVYGYQNLRICDGSMIPANLGVNPSLTITALTERAMSFVAPKEKEIF
CCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHE
NFKFEKKWGVIGLFGKVKNAAITTGARKNKPTPRAKNKR
EEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLDSTLKRKEILYDYDYIIVGSGFGGCVSALRLSQKGYKVAVLESGKRWNSSEFPKTNW
CCCHHHHHHHHEEECCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
NLRKFLWFPKLFCFGIQRINFLNDVMVLSGAGVGGGSLVYANTLYVPPEPFWKKEIVQKM
CHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHC
GGKKGILPFYELAKKMLGVVENPKTWESDRYMQETAKTFGIENTFNKTPVGVHFGKNGID
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCC
PFFGGEGPERNSCNDCGGCMVGCRYNAKNTLDKNYLYFAEKAGAVIFPETKVSKLAPLGE
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEECCCHHHHHCCCCC
DGSEGYEVHTEKTTSLFGYPKKIYKVKSVVLSAGVLGTLGLLLKMKEEGILPKLSKQLGQ
CCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VVRTNSESLIGVTLKDKKADLSHGIAITSSVFPDEHTHIEPVRYSDGADAMNSLAAGVLV
HHHCCCCCEEEEEECCCCCCHHCCEEEEECCCCCCCCCCCCEEECCCHHHHHHHHCCEEE
DGGGSIPRQLRFLIEVLKHPIHSVSLLNPIGFARRTIILLVMQTVDNSIEIVRKRRWIWP
ECCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCH
FKRTLSSTQESGEKIPTYIPIANEFAKRLAKISGGIARSSINEALLDIPATAHILGGCNI
HHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHEEECCCC
GESSETGVIDLQNKVYGYQNLRICDGSMIPANLGVNPSLTITALTERAMSFVAPKEKEIF
CCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHE
NFKFEKKWGVIGLFGKVKNAAITTGARKNKPTPRAKNKR
EEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA