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The map label for this gene is rfbU [H]

Identifier: 116326961

GI number: 116326961

Start: 148708

End: 149919

Strand: Direct

Name: rfbU [H]

Synonym: LBL_0127

Alternate gene names: 116326961

Gene position: 148708-149919 (Clockwise)

Preceding gene: 116326948

Following gene: 116326966

Centisome position: 4.11

GC content: 37.95

Gene sequence:

>1212_bases
ATGAGAACCCAAAGGAAGAAAGAACAAAGGAACCAAACTTTAGCGATCGGATTAGATGCGCGTATGATTGCTCATTCAGG
GATTGGAATGAGAATCCGTGGTCTTTTGAAGTATCTCGGTCCGATTACGGTGAAAGAGAATTTTCGGATCTATCTTTTTG
GAGATGTAACGACGATTTTGAACGAAGGAATTTTGTGTTATGAATTTTCCGGTTTTGAGAAAAACCGAAGTGAAACTTCG
AATAATTCTTTTAAAAAAAAATCTGAAAAAGAAAAGGATTTTTCTTATCCTGTAATTCGCTACCATTCTCCGATCTATTC
TCTTTCCGAGTTTTTAGGTCATCCTTTGATGGGAAAAATGGACCTTTTGGATATTCCCCATTTCAATGCACCTTTGCGCT
ATCTCGGAAAGTCGATCGTGACAATCCACGATATCATTCCTTTTCAAGTTCATTCGAGTTTTCTGAAACGAATTTATATG
CGGATTGTATTTCGTTTGCTTCGACGATTTTCAAAAAAGATCGTATCCGTTTCCGAATATACGGCAAAAGATTTGAAGTC
CATTTTCGGTTTTTCTAAAAAGGAAATGAAAGTGATCCACAACGGAATCGATCAATCCGTTTTTTATCCTGCGACGGCTG
CGGAGAAAAAAAAATTTCTGAAAAAGTACAAACTCAAAGAAGGTTACTTATTGAGCGTAGGGATCGGAAAAGGCCATAAG
AATTTAAACTTTGTTCTCAATGCTTTAAAACCTCTTTGGGATTCTAAGATTCTAAAAACAAAATGGGTATTAGGCGGCGT
TTCGGGAAAGATTCCCGGCTATTTGCAAGCGGACATTAGAGGTTATGAAGATAGGATTTTTCCTATGGAAAGACTGTCCT
TGAACGAACTTCGTTGCCTTTATTCTTGTGCGGGGCTTTTCATTTTTCCTTCAAAGTATGAGGGTTTCGGATTTCCTCCT
TTAGAAGCCCAAGCCTGCGGCCTTCCGGTGATATCTTCGAATGCAACTGTTATGCCGGAAATTCTTAAAGATAGTGTGTA
CTATTTTTCTCCGAATAAACCGGAAGAGTTGCAAAGTCTTTTGAGAGATTTTTCAAAAGATCGGAACATCGTAAAAAACT
TGATCATAAAAGGCAAAAAAAATTCCGCCGGATTTTCTTGGGAAAAGGCGGCTTTAGAAATATTAGAGGTTTATAAAAGT
GTAACGCCCTGA

Upstream 100 bases:

>100_bases
AATCTAACTTCTCATTCCCATTCTCGAAAGTACCTACTGAATCTTCCATCTGATTTTCATTTTCTTGCAGATTTCCGACA
GCGGGTAATTCTGTCTGATC

Downstream 100 bases:

>100_bases
AATCAGGTTTACAAAAATCAAACTGCTTGACGGACGAAATGAGGAGTAAAAAGTCCTAACGTTTAATTCCTAATTCGCGT
TAGCTTAGGGGCCTCTATAA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MRTQRKKEQRNQTLAIGLDARMIAHSGIGMRIRGLLKYLGPITVKENFRIYLFGDVTTILNEGILCYEFSGFEKNRSETS
NNSFKKKSEKEKDFSYPVIRYHSPIYSLSEFLGHPLMGKMDLLDIPHFNAPLRYLGKSIVTIHDIIPFQVHSSFLKRIYM
RIVFRLLRRFSKKIVSVSEYTAKDLKSIFGFSKKEMKVIHNGIDQSVFYPATAAEKKKFLKKYKLKEGYLLSVGIGKGHK
NLNFVLNALKPLWDSKILKTKWVLGGVSGKIPGYLQADIRGYEDRIFPMERLSLNELRCLYSCAGLFIFPSKYEGFGFPP
LEAQACGLPVISSNATVMPEILKDSVYYFSPNKPEELQSLLRDFSKDRNIVKNLIIKGKKNSAGFSWEKAALEILEVYKS
VTP

Sequences:

>Translated_403_residues
MRTQRKKEQRNQTLAIGLDARMIAHSGIGMRIRGLLKYLGPITVKENFRIYLFGDVTTILNEGILCYEFSGFEKNRSETS
NNSFKKKSEKEKDFSYPVIRYHSPIYSLSEFLGHPLMGKMDLLDIPHFNAPLRYLGKSIVTIHDIIPFQVHSSFLKRIYM
RIVFRLLRRFSKKIVSVSEYTAKDLKSIFGFSKKEMKVIHNGIDQSVFYPATAAEKKKFLKKYKLKEGYLLSVGIGKGHK
NLNFVLNALKPLWDSKILKTKWVLGGVSGKIPGYLQADIRGYEDRIFPMERLSLNELRCLYSCAGLFIFPSKYEGFGFPP
LEAQACGLPVISSNATVMPEILKDSVYYFSPNKPEELQSLLRDFSKDRNIVKNLIIKGKKNSAGFSWEKAALEILEVYKS
VTP
>Mature_403_residues
MRTQRKKEQRNQTLAIGLDARMIAHSGIGMRIRGLLKYLGPITVKENFRIYLFGDVTTILNEGILCYEFSGFEKNRSETS
NNSFKKKSEKEKDFSYPVIRYHSPIYSLSEFLGHPLMGKMDLLDIPHFNAPLRYLGKSIVTIHDIIPFQVHSSFLKRIYM
RIVFRLLRRFSKKIVSVSEYTAKDLKSIFGFSKKEMKVIHNGIDQSVFYPATAAEKKKFLKKYKLKEGYLLSVGIGKGHK
NLNFVLNALKPLWDSKILKTKWVLGGVSGKIPGYLQADIRGYEDRIFPMERLSLNELRCLYSCAGLFIFPSKYEGFGFPP
LEAQACGLPVISSNATVMPEILKDSVYYFSPNKPEELQSLLRDFSKDRNIVKNLIIKGKKNSAGFSWEKAALEILEVYKS
VTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 46163; Mature: 46163

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTQRKKEQRNQTLAIGLDARMIAHSGIGMRIRGLLKYLGPITVKENFRIYLFGDVTTIL
CCCCHHHHHCCCEEEEECCHHHHHHCCCCHHHHHHHHHHCCEEEECCCEEEEEECHHHHH
NEGILCYEFSGFEKNRSETSNNSFKKKSEKEKDFSYPVIRYHSPIYSLSEFLGHPLMGKM
HCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCC
DLLDIPHFNAPLRYLGKSIVTIHDIIPFQVHSSFLKRIYMRIVFRLLRRFSKKIVSVSEY
CEECCCCCCCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAKDLKSIFGFSKKEMKVIHNGIDQSVFYPATAAEKKKFLKKYKLKEGYLLSVGIGKGHK
HHHHHHHHHCCCHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC
NLNFVLNALKPLWDSKILKTKWVLGGVSGKIPGYLQADIRGYEDRIFPMERLSLNELRCL
HHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCCEEECCCCCCCHHCCCHHHCCHHHHHHH
YSCAGLFIFPSKYEGFGFPPLEAQACGLPVISSNATVMPEILKDSVYYFSPNKPEELQSL
HHHCCCEEECCCCCCCCCCCCCHHHCCCCEECCCCCCHHHHHHCCEEEECCCCHHHHHHH
LRDFSKDRNIVKNLIIKGKKNSAGFSWEKAALEILEVYKSVTP
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTQRKKEQRNQTLAIGLDARMIAHSGIGMRIRGLLKYLGPITVKENFRIYLFGDVTTIL
CCCCHHHHHCCCEEEEECCHHHHHHCCCCHHHHHHHHHHCCEEEECCCEEEEEECHHHHH
NEGILCYEFSGFEKNRSETSNNSFKKKSEKEKDFSYPVIRYHSPIYSLSEFLGHPLMGKM
HCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCC
DLLDIPHFNAPLRYLGKSIVTIHDIIPFQVHSSFLKRIYMRIVFRLLRRFSKKIVSVSEY
CEECCCCCCCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAKDLKSIFGFSKKEMKVIHNGIDQSVFYPATAAEKKKFLKKYKLKEGYLLSVGIGKGHK
HHHHHHHHHCCCHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC
NLNFVLNALKPLWDSKILKTKWVLGGVSGKIPGYLQADIRGYEDRIFPMERLSLNELRCL
HHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCCEEECCCCCCCHHCCCHHHCCHHHHHHH
YSCAGLFIFPSKYEGFGFPPLEAQACGLPVISSNATVMPEILKDSVYYFSPNKPEELQSL
HHHCCCEEECCCCCCCCCCCCCHHHCCCCEECCCCCCHHHHHHCCEEEECCCCHHHHHHH
LRDFSKDRNIVKNLIIKGKKNSAGFSWEKAALEILEVYKSVTP
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]