| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116326937
Identifier: 116326937
GI number: 116326937
Start: 115787
End: 116581
Strand: Direct
Name: 116326937
Synonym: LBL_0103
Alternate gene names: NA
Gene position: 115787-116581 (Clockwise)
Preceding gene: 116326936
Following gene: 116326940
Centisome position: 3.2
GC content: 34.09
Gene sequence:
>795_bases ATGAATCAAGTCATGGTTCTGTTTTTTATTATTCTTTCATTTTCCTGTTTTGCAGGGATCCGTAAAGAACTGAATTATTT CTCCGATTCGATCGCATTCTATTCTTTTGAAAACGGTCCCGAACTTCCTTCATGGTTGGATCGTAGTGCTACCTATCTTC AAAATGAAGAAAAAAATAATTTTAGAAGTCTGATCGCAAGCGCTTTATATCAGATGGGAAACAAAAATGATTCTCTGATC AACGATTCTGCATTTAGAATTTTTTCAAAGGAATTGAGTAAGGAAATCGCTGAGCGTTCTTATGAAAAGTTTGAACATTC TCCATATCACACATACCAACTTTGGATATTAAAAAAAGAGGACACGATCAATCCGGGGCGGAGAATTCGAAGGACGGTGT TTTTGCTTTATCCGAAAGTCGATTCGATTCATTTCGTCTTTTTTGAATTGAATCAATTCATAGATTTTCAAACACTTTAT ACGTTTCAAGATTGGTCTAATTACTCTCTATCGGAATCGAATATTCGACCTTCCCTGGAAGTTTATATTCCGGATTCTGC AATCGGAACTTTATCTTATTATAAGGATTTTCAAGGAAAATCCGAAAAATTTCACGTCGTTTTTCAAACTCACCCTTCTA TATTAGAAAACGCTACGGTAGAAAAATCGCAAAAAGAAAAGGACTCGAAAAATATCGAGAGAAGACTCATAGAACTAAAA AACTTGTTCGATAAGAAATTAATTTCCGAAGAGGAATTTAAAAAGAAACGGGAAGAAATTCTGAAATCACTTTAA
Upstream 100 bases:
>100_bases AGTTTAAGAATTCCACTCATAAATTATGTTAATTCCTGCAGATTAAGTCCCATCTTGGAAAATGGTTGTAGGTGAAAAGG GAGCGTTCGTTGAGTTTGTT
Downstream 100 bases:
>100_bases AATTTTTGAATTTGGAAAAAATTTCAAAAAATCGGAGCGGCTTTGTAAAAAGCCACTCCGCAGAGAATAGTGAAGAGAAT TGGATTTTCCCACCTTGAAC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNQVMVLFFIILSFSCFAGIRKELNYFSDSIAFYSFENGPELPSWLDRSATYLQNEEKNNFRSLIASALYQMGNKNDSLI NDSAFRIFSKELSKEIAERSYEKFEHSPYHTYQLWILKKEDTINPGRRIRRTVFLLYPKVDSIHFVFFELNQFIDFQTLY TFQDWSNYSLSESNIRPSLEVYIPDSAIGTLSYYKDFQGKSEKFHVVFQTHPSILENATVEKSQKEKDSKNIERRLIELK NLFDKKLISEEEFKKKREEILKSL
Sequences:
>Translated_264_residues MNQVMVLFFIILSFSCFAGIRKELNYFSDSIAFYSFENGPELPSWLDRSATYLQNEEKNNFRSLIASALYQMGNKNDSLI NDSAFRIFSKELSKEIAERSYEKFEHSPYHTYQLWILKKEDTINPGRRIRRTVFLLYPKVDSIHFVFFELNQFIDFQTLY TFQDWSNYSLSESNIRPSLEVYIPDSAIGTLSYYKDFQGKSEKFHVVFQTHPSILENATVEKSQKEKDSKNIERRLIELK NLFDKKLISEEEFKKKREEILKSL >Mature_264_residues MNQVMVLFFIILSFSCFAGIRKELNYFSDSIAFYSFENGPELPSWLDRSATYLQNEEKNNFRSLIASALYQMGNKNDSLI NDSAFRIFSKELSKEIAERSYEKFEHSPYHTYQLWILKKEDTINPGRRIRRTVFLLYPKVDSIHFVFFELNQFIDFQTLY TFQDWSNYSLSESNIRPSLEVYIPDSAIGTLSYYKDFQGKSEKFHVVFQTHPSILENATVEKSQKEKDSKNIERRLIELK NLFDKKLISEEEFKKKREEILKSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31365; Mature: 31365
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQVMVLFFIILSFSCFAGIRKELNYFSDSIAFYSFENGPELPSWLDRSATYLQNEEKNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHH FRSLIASALYQMGNKNDSLINDSAFRIFSKELSKEIAERSYEKFEHSPYHTYQLWILKKE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC DTINPGRRIRRTVFLLYPKVDSIHFVFFELNQFIDFQTLYTFQDWSNYSLSESNIRPSLE CCCCHHHHHHHHHEEEEECCCCCEEHEEEHHHHHCHHHEEEECCCCCCCCCCCCCCCCEE VYIPDSAIGTLSYYKDFQGKSEKFHVVFQTHPSILENATVEKSQKEKDSKNIERRLIELK EEECCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH NLFDKKLISEEEFKKKREEILKSL HHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNQVMVLFFIILSFSCFAGIRKELNYFSDSIAFYSFENGPELPSWLDRSATYLQNEEKNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHH FRSLIASALYQMGNKNDSLINDSAFRIFSKELSKEIAERSYEKFEHSPYHTYQLWILKKE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC DTINPGRRIRRTVFLLYPKVDSIHFVFFELNQFIDFQTLYTFQDWSNYSLSESNIRPSLE CCCCHHHHHHHHHEEEEECCCCCEEHEEEHHHHHCHHHEEEECCCCCCCCCCCCCCCCEE VYIPDSAIGTLSYYKDFQGKSEKFHVVFQTHPSILENATVEKSQKEKDSKNIERRLIELK EEECCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH NLFDKKLISEEEFKKKREEILKSL HHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA