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The map label for this gene is 116326884

Identifier: 116326884

GI number: 116326884

Start: 44241

End: 44906

Strand: Direct

Name: 116326884

Synonym: LBL_0037

Alternate gene names: NA

Gene position: 44241-44906 (Clockwise)

Preceding gene: 116326883

Following gene: 116326885

Centisome position: 1.22

GC content: 39.04

Gene sequence:

>666_bases
TTGATTCGGATTCTTCTTTTTGAATTTCCCTTAACTACTTTTTTCGTTTTTTTAATGGTCGTGACTTTTTTTATCGTGAA
CATTTTTCTTCCGGAACATCTGATTCGACAATATTTCTTAAATCATCCCGGACAAATTCAACCCGTATCTTGGATCGGAG
CCGTATTTTATCATGGAAGTTTAATACATTTATCCGGGAATATGTTTTATCTTTTTTTCCTGGGAAGAGCCGTAGAATAC
AAAGCAGGAAAAGGAAGATGGCTTTTGTTCTTTTTTATGGCCGCTTTAATTTCTTCCCTATTGGATTCTTTTATTCGTGG
AGTCATCTTGCACGATTCGACTCCGGTGGTCGGTGCTTCGGGCGCTATCTCGGGTATAGCCGCAGTAGCCGCATTACTTT
CTCCGTTTTCTCTTCGTTTCAATCATAAGAATATTCCATTTCCGGTTTTTTTAGTAGCATGGATTATGGTTTACTCCGAC
ATTACGAACGTTTTTACCGAAGACGGGGTTGCACGTTGGGCCCATTTAGGCGGTTTTATCTCCGTCATTTTTGCGGCCTA
TTTTTTAAAACCTACGGAAAGAAAACAGCTTCATTCCGGTTTTATTCTCAACTTAATCTTTATCATTTTGGCTTTAATCC
TGGCGTTTTTCTATTCAAGCCGCTGA

Upstream 100 bases:

>100_bases
CAATTTTAAACCTCTGGATCCGAGAGCAAAATAATCATCGAATTAAAGATCATTTTAAAATCTTATCTGACTCGATACTT
CCCCGGAGGACAAAACTACC

Downstream 100 bases:

>100_bases
TTTTTTTAGCTTGTAGGTCGGCTCAAAACTTAAAATGTATGAGTTCCTGCAATTTTTTAAACGGCAAGGAAACGTCTCAC
AAAAGCGATAAAGCCGATAG

Product: rhomboid family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MIRILLFEFPLTTFFVFLMVVTFFIVNIFLPEHLIRQYFLNHPGQIQPVSWIGAVFYHGSLIHLSGNMFYLFFLGRAVEY
KAGKGRWLLFFFMAALISSLLDSFIRGVILHDSTPVVGASGAISGIAAVAALLSPFSLRFNHKNIPFPVFLVAWIMVYSD
ITNVFTEDGVARWAHLGGFISVIFAAYFLKPTERKQLHSGFILNLIFIILALILAFFYSSR

Sequences:

>Translated_221_residues
MIRILLFEFPLTTFFVFLMVVTFFIVNIFLPEHLIRQYFLNHPGQIQPVSWIGAVFYHGSLIHLSGNMFYLFFLGRAVEY
KAGKGRWLLFFFMAALISSLLDSFIRGVILHDSTPVVGASGAISGIAAVAALLSPFSLRFNHKNIPFPVFLVAWIMVYSD
ITNVFTEDGVARWAHLGGFISVIFAAYFLKPTERKQLHSGFILNLIFIILALILAFFYSSR
>Mature_221_residues
MIRILLFEFPLTTFFVFLMVVTFFIVNIFLPEHLIRQYFLNHPGQIQPVSWIGAVFYHGSLIHLSGNMFYLFFLGRAVEY
KAGKGRWLLFFFMAALISSLLDSFIRGVILHDSTPVVGASGAISGIAAVAALLSPFSLRFNHKNIPFPVFLVAWIMVYSD
ITNVFTEDGVARWAHLGGFISVIFAAYFLKPTERKQLHSGFILNLIFIILALILAFFYSSR

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25070; Mature: 25070

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRILLFEFPLTTFFVFLMVVTFFIVNIFLPEHLIRQYFLNHPGQIQPVSWIGAVFYHGS
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE
LIHLSGNMFYLFFLGRAVEYKAGKGRWLLFFFMAALISSLLDSFIRGVILHDSTPVVGAS
EEEEECCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
GAISGIAAVAALLSPFSLRFNHKNIPFPVFLVAWIMVYSDITNVFTEDGVARWAHLGGFI
HHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVIFAAYFLKPTERKQLHSGFILNLIFIILALILAFFYSSR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRILLFEFPLTTFFVFLMVVTFFIVNIFLPEHLIRQYFLNHPGQIQPVSWIGAVFYHGS
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE
LIHLSGNMFYLFFLGRAVEYKAGKGRWLLFFFMAALISSLLDSFIRGVILHDSTPVVGAS
EEEEECCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
GAISGIAAVAALLSPFSLRFNHKNIPFPVFLVAWIMVYSDITNVFTEDGVARWAHLGGFI
HHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVIFAAYFLKPTERKQLHSGFILNLIFIILALILAFFYSSR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA