Click here to switch to the map view.

The map label for this gene is 116326878

Identifier: 116326878

GI number: 116326878

Start: 38789

End: 39316

Strand: Reverse

Name: 116326878

Synonym: LBL_0030

Alternate gene names: NA

Gene position: 39316-38789 (Counterclockwise)

Preceding gene: 116326879

Following gene: 116326877

Centisome position: 1.09

GC content: 35.42

Gene sequence:

>528_bases
ATGGAGAACGAGAAGAAGCGATTCTGCAGGAATTGTGGTACACATATCTTAGTGGAGTCGATCCAGTGCGTATTTTGCGG
ATCGTTTCAGGTTCGGAATTCGATTTCTTTTTTTCGTTTTGCGACTGAAAGTAAATTTTTCAGAACCAAAATTCTTTATC
CTGTTTTGCCGTTTTTGGGATTATTTTTTTTCGTAGTTCATATTTTTCTTAAGTTCGAAGCAATTCCGTTATATGTTTCG
ATTTTATTTTTTTTGTGGGCTCTGATATTTTCTATCTCAGGTTGGATCGGAGAATTGATTTTGGACCTAAAATTTCGGGG
AGATGTAAAAGATTTTAAAGAAGGGTTTATCGAATGGCAAAAACACCTCTACGATCGTTCTCCCACACTTTCCTACCTAG
GAATGATCTTATTCGTTGCGACGCCTTTGATACAATGGCAGAATTCTCTTTGGTTTTCTTTGTCTTCCTCCGGAATTTGG
ACTTTATTGATTTCTTTTATTATTTTAGTTATCATTCCGTTAATTTAA

Upstream 100 bases:

>100_bases
TCAATAATAAACCTTTTCCAAAAAGTGGAACTCCGGATGTTGACTTTTTACGTCGGCTGATCTATCAACTTATCAATCAG
AGTTGATCTTTTATCGCCAA

Downstream 100 bases:

>100_bases
AAAATTATAAATTACCTCAAGGACACCTCTACAAAATCCGAAGATGCAGATTCTAAAATTAAATTTCCAGATGAAATCAC
CGTTTTCAAGGTGATCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MENEKKRFCRNCGTHILVESIQCVFCGSFQVRNSISFFRFATESKFFRTKILYPVLPFLGLFFFVVHIFLKFEAIPLYVS
ILFFLWALIFSISGWIGELILDLKFRGDVKDFKEGFIEWQKHLYDRSPTLSYLGMILFVATPLIQWQNSLWFSLSSSGIW
TLLISFIILVIIPLI

Sequences:

>Translated_175_residues
MENEKKRFCRNCGTHILVESIQCVFCGSFQVRNSISFFRFATESKFFRTKILYPVLPFLGLFFFVVHIFLKFEAIPLYVS
ILFFLWALIFSISGWIGELILDLKFRGDVKDFKEGFIEWQKHLYDRSPTLSYLGMILFVATPLIQWQNSLWFSLSSSGIW
TLLISFIILVIIPLI
>Mature_175_residues
MENEKKRFCRNCGTHILVESIQCVFCGSFQVRNSISFFRFATESKFFRTKILYPVLPFLGLFFFVVHIFLKFEAIPLYVS
ILFFLWALIFSISGWIGELILDLKFRGDVKDFKEGFIEWQKHLYDRSPTLSYLGMILFVATPLIQWQNSLWFSLSSSGIW
TLLISFIILVIIPLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20561; Mature: 20561

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENEKKRFCRNCGTHILVESIQCVFCGSFQVRNSISFFRFATESKFFRTKILYPVLPFLG
CCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFFVVHIFLKFEAIPLYVSILFFLWALIFSISGWIGELILDLKFRGDVKDFKEGFIEWQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KHLYDRSPTLSYLGMILFVATPLIQWQNSLWFSLSSSGIWTLLISFIILVIIPLI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENEKKRFCRNCGTHILVESIQCVFCGSFQVRNSISFFRFATESKFFRTKILYPVLPFLG
CCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFFVVHIFLKFEAIPLYVSILFFLWALIFSISGWIGELILDLKFRGDVKDFKEGFIEWQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KHLYDRSPTLSYLGMILFVATPLIQWQNSLWFSLSSSGIWTLLISFIILVIIPLI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA