| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is metX
Identifier: 115353205
GI number: 115353205
Start: 3486671
End: 3487816
Strand: Direct
Name: metX
Synonym: Bamb_3154
Alternate gene names: 115353205
Gene position: 3486671-3487816 (Clockwise)
Preceding gene: 115353196
Following gene: 115353206
Centisome position: 98.04
GC content: 65.88
Gene sequence:
>1146_bases ATGGAATCGATCGGCATCGTCGCTCCACAGACCATGCACTTCGCCGAACCACTGCGCTTGCAAAGCGGCAGCGTGATCGG CAACTATCAGCTCGTCGTCGAAACGTACGGCGAGCTCAACGCCGCGCGTTCGAACGCGGTGCTCGTCTGCCACGCGCTCA ACGCGTCGCATCACGTCGCCGGCGTCTACGCGGACGATCCGCGCAGCACCGGCTGGTGGGACAACATGGTCGGCCCGGGC AAGCCGCTCGACACCAACCGCTTCTTCGTGATCGGCGTGAACAACCTCGGCTCGTGCTTCGGCTCGACCGGCCCGATGAG CATCGACCCGTCGAGCGGAAAGCCATACGGCGCGCGCTTTCCGGTCGTCACCGTCGAGGACTGGGTGCACGCGCAGGCGC GCGTCGCGGATGCCTTCGGCATCGAGCGCTTCGCCGCGGTGATGGGCGGCAGCCTCGGCGGGATGCAGGCGCTCGCGTGG AGCCTGATGTATCCGGAGCGCGTCGCACACTGCATCGACATCGCGTCGACACCGAAGCTGTCCGCGCAGAACATCGCGTT CAACGAAGTCGCGCGCTCGGCGATCCTGTCCGATCCCGACTTCCACGGCGGCGACTATTACGCGCACGGCGTGAAGCCGA AGCGCGGCCTGCGCGTCGCGCGGATGATCGGCCACATCACGTACCTGTCCGACGACGACATGGCCGAGAAATTCGGCCGT GCGCTGCGCCGCGCGGACGGCGCGCTCGACGCGTACAACTTCAGCTTCGACGTCGAGTTCGAGGTCGAGTCGTACCTGCG CTACCAGGGCGACAAGTTTGCCGACTACTTCGACGCGAACACCTACCTGCTGATCACACGCGCGCTCGACTACTTCGATC CGGCCAAGGCGTTCGACGGCAATCTGACGGCCGCGCTCGCGCATACGCAGGCGAAGTACCTGATCGCGAGCTTCTCGACC GACTGGCGCTTCGCGCCGGCGCGTTCGCGCGAGATCGTGAAGGCGCTGCTCGACAACAAGCGCACGGTCAGCTACGCGGA GATCGACGCGCCGCACGGCCACGACGCGTTCCTGCTCGACGATGCGCGCTATCACAACCTGCTGCGCGCGTATTACGAAC GAATCGCCAACGAGGTAGGCGCATGA
Upstream 100 bases:
>100_bases CAGGTTCACTACAAATGCGGCTAAAGAGGTCGTCAGCCGCGCACCTTCGCCTCCGCGCATCGCCGACACCGTTTAGCCGC CCAGTCATAAGGCGGAACGA
Downstream 100 bases:
>100_bases ACCAGCAAGCCCTGAACTCCCTGTCCGCGCGCGCAGACTTCCGCACGATCGCGCGCTGGGTCGAACCGCGCTCGACGGTG CTCGACCTCGGCTGCGGCGA
Product: homoserine O-acetyltransferase
Products: NA
Alternate protein names: Homoserine O-trans-acetylase; HTA; Homoserine transacetylase [H]
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MESIGIVAPQTMHFAEPLRLQSGSVIGNYQLVVETYGELNAARSNAVLVCHALNASHHVAGVYADDPRSTGWWDNMVGPG KPLDTNRFFVIGVNNLGSCFGSTGPMSIDPSSGKPYGARFPVVTVEDWVHAQARVADAFGIERFAAVMGGSLGGMQALAW SLMYPERVAHCIDIASTPKLSAQNIAFNEVARSAILSDPDFHGGDYYAHGVKPKRGLRVARMIGHITYLSDDDMAEKFGR ALRRADGALDAYNFSFDVEFEVESYLRYQGDKFADYFDANTYLLITRALDYFDPAKAFDGNLTAALAHTQAKYLIASFST DWRFAPARSREIVKALLDNKRTVSYAEIDAPHGHDAFLLDDARYHNLLRAYYERIANEVGA
Sequences:
>Translated_381_residues MESIGIVAPQTMHFAEPLRLQSGSVIGNYQLVVETYGELNAARSNAVLVCHALNASHHVAGVYADDPRSTGWWDNMVGPG KPLDTNRFFVIGVNNLGSCFGSTGPMSIDPSSGKPYGARFPVVTVEDWVHAQARVADAFGIERFAAVMGGSLGGMQALAW SLMYPERVAHCIDIASTPKLSAQNIAFNEVARSAILSDPDFHGGDYYAHGVKPKRGLRVARMIGHITYLSDDDMAEKFGR ALRRADGALDAYNFSFDVEFEVESYLRYQGDKFADYFDANTYLLITRALDYFDPAKAFDGNLTAALAHTQAKYLIASFST DWRFAPARSREIVKALLDNKRTVSYAEIDAPHGHDAFLLDDARYHNLLRAYYERIANEVGA >Mature_381_residues MESIGIVAPQTMHFAEPLRLQSGSVIGNYQLVVETYGELNAARSNAVLVCHALNASHHVAGVYADDPRSTGWWDNMVGPG KPLDTNRFFVIGVNNLGSCFGSTGPMSIDPSSGKPYGARFPVVTVEDWVHAQARVADAFGIERFAAVMGGSLGGMQALAW SLMYPERVAHCIDIASTPKLSAQNIAFNEVARSAILSDPDFHGGDYYAHGVKPKRGLRVARMIGHITYLSDDDMAEKFGR ALRRADGALDAYNFSFDVEFEVESYLRYQGDKFADYFDANTYLLITRALDYFDPAKAFDGNLTAALAHTQAKYLIASFST DWRFAPARSREIVKALLDNKRTVSYAEIDAPHGHDAFLLDDARYHNLLRAYYERIANEVGA
Specific function: Unknown
COG id: COG2021
COG function: function code E; Homoserine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HTA family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324052, Length=238, Percent_Identity=36.9747899159664, Blast_Score=159, Evalue=6e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR008220 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =2.3.1.31 [H]
Molecular weight: Translated: 41971; Mature: 41971
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESIGIVAPQTMHFAEPLRLQSGSVIGNYQLVVETYGELNAARSNAVLVCHALNASHHVA CCCCCCCCCCHHHHCCCCEECCCCEEECEEEEEEEHHHHHCCCCCEEEEEEECCCCCEEE GVYADDPRSTGWWDNMVGPGKPLDTNRFFVIGVNNLGSCFGSTGPMSIDPSSGKPYGARF EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCEECCCCCCCCCCCC PVVTVEDWVHAQARVADAFGIERFAAVMGGSLGGMQALAWSLMYPERVAHCIDIASTPKL CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCC SAQNIAFNEVARSAILSDPDFHGGDYYAHGVKPKRGLRVARMIGHITYLSDDDMAEKFGR CCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHEEECCCHHHHHHHH ALRRADGALDAYNFSFDVEFEVESYLRYQGDKFADYFDANTYLLITRALDYFDPAKAFDG HHHHHCCCCEEECEEEEEEEEHHHHHHHCCCCHHHHHCCCEEEEEEEHHHHCCCHHHCCC NLTAALAHTQAKYLIASFSTDWRFAPARSREIVKALLDNKRTVSYAEIDAPHGHDAFLLD CEEEEHHHHHHEEEEEECCCCCEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEC DARYHNLLRAYYERIANEVGA CHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MESIGIVAPQTMHFAEPLRLQSGSVIGNYQLVVETYGELNAARSNAVLVCHALNASHHVA CCCCCCCCCCHHHHCCCCEECCCCEEECEEEEEEEHHHHHCCCCCEEEEEEECCCCCEEE GVYADDPRSTGWWDNMVGPGKPLDTNRFFVIGVNNLGSCFGSTGPMSIDPSSGKPYGARF EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCEECCCCCCCCCCCC PVVTVEDWVHAQARVADAFGIERFAAVMGGSLGGMQALAWSLMYPERVAHCIDIASTPKL CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCC SAQNIAFNEVARSAILSDPDFHGGDYYAHGVKPKRGLRVARMIGHITYLSDDDMAEKFGR CCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHEEECCCHHHHHHHH ALRRADGALDAYNFSFDVEFEVESYLRYQGDKFADYFDANTYLLITRALDYFDPAKAFDG HHHHHCCCCEEECEEEEEEEEHHHHHHHCCCCHHHHHCCCEEEEEEEHHHHCCCHHHCCC NLTAALAHTQAKYLIASFSTDWRFAPARSREIVKALLDNKRTVSYAEIDAPHGHDAFLLD CEEEEHHHHHHEEEEEECCCCCEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEC DARYHNLLRAYYERIANEVGA CHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA