Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115353175

Identifier: 115353175

GI number: 115353175

Start: 3443558

End: 3443743

Strand: Direct

Name: 115353175

Synonym: Bamb_3124

Alternate gene names: NA

Gene position: 3443558-3443743 (Clockwise)

Preceding gene: 115353174

Following gene: 115353177

Centisome position: 96.82

GC content: 62.9

Gene sequence:

>186_bases
ATGACGACCTATTTCACGATCGGCGACTTCATCCTGTTGATTCCGATGGCGCTGGCCGGCGCGCTATTTCTCGGCGCGGT
GCCCTGCGCGACCCAATTCCGCCATAACCTGCTGCGCGTGCTCGGCGTGATGCTCGGCGTCGGCGTTGCGGTATTGCTCG
TCGAAGGCCTTCCCGCACTGCTGTAG

Upstream 100 bases:

>100_bases
CTGCCGGCCCCACTCGCAATCGGTCCGGCACATATTAGAAATGCCCGGCATGAGCGGGTACAGGCGCGTGCGCCTGCGCC
GGCCGACTATGGAGACACGC

Downstream 100 bases:

>100_bases
CAACGCGTTCGCGCGCCGGTCACATCGCTGCACCGCAGCGACGTGACGGCTTGCTTGCTTGCTTGCGCCGCGATACGGGA
TGCGATCGTTCGCATTCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MTTYFTIGDFILLIPMALAGALFLGAVPCATQFRHNLLRVLGVMLGVGVAVLLVEGLPALL

Sequences:

>Translated_61_residues
MTTYFTIGDFILLIPMALAGALFLGAVPCATQFRHNLLRVLGVMLGVGVAVLLVEGLPALL
>Mature_60_residues
TTYFTIGDFILLIPMALAGALFLGAVPCATQFRHNLLRVLGVMLGVGVAVLLVEGLPALL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6413; Mature: 6282

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYFTIGDFILLIPMALAGALFLGAVPCATQFRHNLLRVLGVMLGVGVAVLLVEGLPAL
CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C
>Mature Secondary Structure 
TTYFTIGDFILLIPMALAGALFLGAVPCATQFRHNLLRVLGVMLGVGVAVLLVEGLPAL
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA