Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115353123

Identifier: 115353123

GI number: 115353123

Start: 3391641

End: 3391973

Strand: Direct

Name: 115353123

Synonym: Bamb_3072

Alternate gene names: NA

Gene position: 3391641-3391973 (Clockwise)

Preceding gene: 162389965

Following gene: 115353124

Centisome position: 95.36

GC content: 68.47

Gene sequence:

>333_bases
GTGAAGATCGATTCCACTCCGAAACCGAGCCCCCTCGCGTCGACCGGCAACGGCGCGACCCGCGCGCAATCCGGCGCGGC
TTCGTCGTCGCCCGCGCAGGCGGCCGACGCTGGATCGACCGGCGGCGACACGACCGTGAACCTGTCGGGTCTGTCGGGCC
AGCTGCGTTCGCAGTCGGCCTCGGGCAGCGCCGACATCGACACGGCCCTCGTCCAGTCGATCAAGGACGCGCTGAACGAC
GGCACGCTGACGATCGACGTGAACAAGATCGCCGACGGCGTATTGAATACCGCCCGCGACCTGCTGCAACAGCAGCGCTC
GCAGGGCAACTGA

Upstream 100 bases:

>100_bases
GATTGCAAAGAATTGTTTATTCGGAGCCTGTCGGGCTCACGATGCTAAAGTTCGGGCCGACCCGGCCGTTATCTGGGTCA
TACCGTACAGGAAACCCATC

Downstream 100 bases:

>100_bases
GCCGGCCAGGGGCCCGTCACGCCCTGACCGGTCCCCTGGTTTGCCGGCATGCGCCACCGCGTGCCGGCGCGACGAGCATG
ACGCGATGAGAGAAGAGCTG

Product: putative anti-sigma-28 factor FlgM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKIDSTPKPSPLASTGNGATRAQSGAASSSPAQAADAGSTGGDTTVNLSGLSGQLRSQSASGSADIDTALVQSIKDALND
GTLTIDVNKIADGVLNTARDLLQQQRSQGN

Sequences:

>Translated_110_residues
MKIDSTPKPSPLASTGNGATRAQSGAASSSPAQAADAGSTGGDTTVNLSGLSGQLRSQSASGSADIDTALVQSIKDALND
GTLTIDVNKIADGVLNTARDLLQQQRSQGN
>Mature_110_residues
MKIDSTPKPSPLASTGNGATRAQSGAASSSPAQAADAGSTGGDTTVNLSGLSGQLRSQSASGSADIDTALVQSIKDALND
GTLTIDVNKIADGVLNTARDLLQQQRSQGN

Specific function: Unknown

COG id: COG2747

COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10913; Mature: 10913

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDSTPKPSPLASTGNGATRAQSGAASSSPAQAADAGSTGGDTTVNLSGLSGQLRSQSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCC
SGSADIDTALVQSIKDALNDGTLTIDVNKIADGVLNTARDLLQQQRSQGN
CCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIDSTPKPSPLASTGNGATRAQSGAASSSPAQAADAGSTGGDTTVNLSGLSGQLRSQSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCC
SGSADIDTALVQSIKDALNDGTLTIDVNKIADGVLNTARDLLQQQRSQGN
CCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA