Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is ordL [H]

Identifier: 115353100

GI number: 115353100

Start: 3367660

End: 3368961

Strand: Direct

Name: ordL [H]

Synonym: Bamb_3049

Alternate gene names: 115353100

Gene position: 3367660-3368961 (Clockwise)

Preceding gene: 115353099

Following gene: 115353105

Centisome position: 94.69

GC content: 69.28

Gene sequence:

>1302_bases
ATGCAGACATTCGCCAACCAGCCGCACGTCGCGTCGTACTACGCGGCGAGCGCCAACGATATGACCCGCCACGCGCCGCT
CGCCGGCGCGACCGACGTCGACGTGTGCGTGATCGGCGCGGGCCTCACTGGTTTGTCCGCCGCGCTCAACCTCGCCGAGC
GCGGCCATTCGGTGACCGTGCTCGAGGCGTCGCGGGTCGGATGGGCGGCGAGCGGACGCAACGGCGGCCAGCTGATCGGC
GGCTTCGCGTGCGACATCGACACCTTCGCCAACTTCATGCCGGAAAGCGACGTGAAGCGGATCTGGGACATGGGGCTCGA
AACGCTGTCGCTCGTGAAGTCGCGCATCGCGCAACACGACATCGACTGCGCGCTCATGTCCGGTTACTTGACCGCCGCGA
ACACCGAGCGCGACGCCGATGCGCTGAAGCGCTGGCGCGACGAGGCCGCGAAGCGCTTCGGCTACGACCGCTTCCATTTC
GTCGAAGCGGACGAACTCGGCGATTACGTACAGTCGGCGCGCTATCGCGGCGGCCTGTACGACCCCGACAGCGGCCACCT
GCATCCGCTGAACTACACGCTCGGGCTCGCGCGCGCGGCGACCGACGCCGGCGTGCGGATCCACGAGGACAGCTGCGTGA
CGCGCATGCGCGACGTCGCGGGCGGTCATGTCGTCGAAACGGACCACGGGCACGTGCGTGCGCGCTTCGTCGTGCTCGCC
TGCAACACCTACGTCGGCACGCTCGCGCCCGCGCTGTCGAGAAAGATCATGCCGGTCGGCACCTACGTGATCGCGACCGA
GCCGCTCGGCGAAGCGCGCGCCGCCGCGCTGATGCCCGCGCGCGCGGCGATCTGCGACAGCCGCTTCGTGCTCGACTATT
TCCGGCCGGCGCCCGACACACGGCTCGTGTGGGGCGGCAAGGTCAGCTATTCGACGCGGCCGCCGCGCAATCTCGCCGCC
GCGATGCGCGCGGACATGCTGAAGACGTTCCCGCAGCTCGCGGACGTGAAGGTCGACTACGCATGGGGCGGCTTCGTCGA
CATCACGATGAACCGCGCGCCGCACTTCGGGCGTATCGCGCCGACGATGTATTTCGCGCAGGGTTTCTCGGGACACGGCG
TGAACACGACCGCGCTCGCGGGCAAGCTGATCGCGGAGGCGATCGACGGCCAGGCGAGCCGCTTCGACCTGTTCGGCAGG
ATCCGGCATCGCGACTTCCCCGGCGGCGCGACGCTGCGCACGCCGGCGCTGGTGCTCGCGATGAGCTGGTACCGGCTGCT
CGATGCGCTCGGCGTGCATTGA

Upstream 100 bases:

>100_bases
CCCGGCGGCGACGCGTGGCGGCAGCCCGCGCTCGAACTCGGGATGCTGTACCACCGCGTGCGCGAGCTGTTCTGAGCCCT
CTTTCTCTGTTCTCCTGACC

Downstream 100 bases:

>100_bases
GCATCGTGCCGCGGGGATGCGGTGCAAGCGGTGAACGCCGCCGCACGCCGAGGCAAAACGAAAACGGCCGCGCAACGAGC
GCGGCCGTTCGATCGAATCG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MQTFANQPHVASYYAASANDMTRHAPLAGATDVDVCVIGAGLTGLSAALNLAERGHSVTVLEASRVGWAASGRNGGQLIG
GFACDIDTFANFMPESDVKRIWDMGLETLSLVKSRIAQHDIDCALMSGYLTAANTERDADALKRWRDEAAKRFGYDRFHF
VEADELGDYVQSARYRGGLYDPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRMRDVAGGHVVETDHGHVRARFVVLA
CNTYVGTLAPALSRKIMPVGTYVIATEPLGEARAAALMPARAAICDSRFVLDYFRPAPDTRLVWGGKVSYSTRPPRNLAA
AMRADMLKTFPQLADVKVDYAWGGFVDITMNRAPHFGRIAPTMYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFGR
IRHRDFPGGATLRTPALVLAMSWYRLLDALGVH

Sequences:

>Translated_433_residues
MQTFANQPHVASYYAASANDMTRHAPLAGATDVDVCVIGAGLTGLSAALNLAERGHSVTVLEASRVGWAASGRNGGQLIG
GFACDIDTFANFMPESDVKRIWDMGLETLSLVKSRIAQHDIDCALMSGYLTAANTERDADALKRWRDEAAKRFGYDRFHF
VEADELGDYVQSARYRGGLYDPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRMRDVAGGHVVETDHGHVRARFVVLA
CNTYVGTLAPALSRKIMPVGTYVIATEPLGEARAAALMPARAAICDSRFVLDYFRPAPDTRLVWGGKVSYSTRPPRNLAA
AMRADMLKTFPQLADVKVDYAWGGFVDITMNRAPHFGRIAPTMYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFGR
IRHRDFPGGATLRTPALVLAMSWYRLLDALGVH
>Mature_433_residues
MQTFANQPHVASYYAASANDMTRHAPLAGATDVDVCVIGAGLTGLSAALNLAERGHSVTVLEASRVGWAASGRNGGQLIG
GFACDIDTFANFMPESDVKRIWDMGLETLSLVKSRIAQHDIDCALMSGYLTAANTERDADALKRWRDEAAKRFGYDRFHF
VEADELGDYVQSARYRGGLYDPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRMRDVAGGHVVETDHGHVRARFVVLA
CNTYVGTLAPALSRKIMPVGTYVIATEPLGEARAAALMPARAAICDSRFVLDYFRPAPDTRLVWGGKVSYSTRPPRNLAA
AMRADMLKTFPQLADVKVDYAWGGFVDITMNRAPHFGRIAPTMYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFGR
IRHRDFPGGATLRTPALVLAMSWYRLLDALGVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787559, Length=425, Percent_Identity=42.1176470588235, Blast_Score=332, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 46981; Mature: 46981

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTFANQPHVASYYAASANDMTRHAPLAGATDVDVCVIGAGLTGLSAALNLAERGHSVTV
CCCCCCCCCCHHEEECCCCCCHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEE
LEASRVGWAASGRNGGQLIGGFACDIDTFANFMPESDVKRIWDMGLETLSLVKSRIAQHD
EEECCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
IDCALMSGYLTAANTERDADALKRWRDEAAKRFGYDRFHFVEADELGDYVQSARYRGGLY
CCHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCC
DPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRMRDVAGGHVVETDHGHVRARFVVLA
CCCCCCEEECHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCEEECCCCCEEEEEEEEE
CNTYVGTLAPALSRKIMPVGTYVIATEPLGEARAAALMPARAAICDSRFVLDYFRPAPDT
ECHHHHHHHHHHHCCCEEECEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
RLVWGGKVSYSTRPPRNLAAAMRADMLKTFPQLADVKVDYAWGGFVDITMNRAPHFGRIA
EEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCC
PTMYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFGRIRHRDFPGGATLRTPALVLA
HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MSWYRLLDALGVH
HHHHHHHHHHCCC
>Mature Secondary Structure
MQTFANQPHVASYYAASANDMTRHAPLAGATDVDVCVIGAGLTGLSAALNLAERGHSVTV
CCCCCCCCCCHHEEECCCCCCHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEE
LEASRVGWAASGRNGGQLIGGFACDIDTFANFMPESDVKRIWDMGLETLSLVKSRIAQHD
EEECCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
IDCALMSGYLTAANTERDADALKRWRDEAAKRFGYDRFHFVEADELGDYVQSARYRGGLY
CCHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCC
DPDSGHLHPLNYTLGLARAATDAGVRIHEDSCVTRMRDVAGGHVVETDHGHVRARFVVLA
CCCCCCEEECHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCEEECCCCCEEEEEEEEE
CNTYVGTLAPALSRKIMPVGTYVIATEPLGEARAAALMPARAAICDSRFVLDYFRPAPDT
ECHHHHHHHHHHHCCCEEECEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
RLVWGGKVSYSTRPPRNLAAAMRADMLKTFPQLADVKVDYAWGGFVDITMNRAPHFGRIA
EEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCC
PTMYFAQGFSGHGVNTTALAGKLIAEAIDGQASRFDLFGRIRHRDFPGGATLRTPALVLA
HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MSWYRLLDALGVH
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]