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The map label for this gene is yihS [H]

Identifier: 115353071

GI number: 115353071

Start: 3340258

End: 3341538

Strand: Direct

Name: yihS [H]

Synonym: Bamb_3020

Alternate gene names: 115353071

Gene position: 3340258-3341538 (Clockwise)

Preceding gene: 115353070

Following gene: 115353072

Centisome position: 93.92

GC content: 68.15

Gene sequence:

>1281_bases
ATGAACATGCCCCCGGTCCAATCCCGCACGGCCACGCCGGCCAACCACGCGCAAGCGGCGCCGTTCGTCGCGAGCTTCCG
CGATCCGTCGTTCCTGCTGTCGCACATCGAGGACACGCTGCGCTTCTACGCGACGAACGCGTTCGACCCGACGGGCGGCT
TCTACCACTACTTCCGCGACGACGGCAGCGTCTACAACCGCACGTCGCGGCATCTGGTCAGCAGCTGCCGGTTCGTCTTC
AACTACGCGATGGCGTACCGGCATTTCGGCGATCCGCGCCATCTCGAGTACGCGCGCCACGGGCTGCGCTTCCTGCGCGA
CGCGCACTGGGACGACGACCTGCAGGGCTACGACTGGGAACTCGACTGGCGCGACGGCGCGAAGCGCGAGACGCTCGACG
CCACGCGCCACTGCTACGGGCTCGCGTTCGTGCTGCTGGCAGCCGCGCACGCGACGATGGCCGGCATCGACGAAGCGCGC
GCGCTGATCGCGTCGACCTTCGAGCTCGCCGAGCACCGCTTCTGGGATGCGGCCGCGGGCCTCTATGCGGACGACGCGAC
GCCGAACTGGAACGTGTCGACGTACCGCGGCCAGAACGCGAACATGCACATGACGGAGGCGCTGCTCGCGGCCTACGAGG
CGACCGGCCACGTCACCTACCTCGACCGCGCGGAGAAGCTCGCGACCCATATCACCCAGCGCCAGGCCGCGCTGTCGGGC
GGCCTCGTGTGGGAGCACTACCATGCGGACTGGTCGGTCGACTGGGACTACAACAAGGAAGACAGCTCGAACATCTTCCG
TCCGTGGGGCTTCCAGCCCGGCCACCAGACCGAATGGGCGAAGCTGCTGCTGATCCTGGAGCGGCACCGCCCGCTCGACT
GGCTCGTGCCGCGCGCGGCCGAGCTGTTCGACGCGGCGCTCACGCACGCGTGGGATGCCGATCACGGCGGCCTCTGCTAC
GGCTTCGGCCCCGACTTCACGATCTGCGACCACAACAAGTATTTCTGGGTGCAGGCGGAAACCTTCGCGGCGGCCGCGAT
GCTCGGCGCGCGCACCGGCAGCGAGCGCTTCTGGGACTGGTACGACGAAATCTGGCGCTACAGCTGGGCGCATTTCGTCG
ATCACCGCTACGGCGCGTGGTACCGGATCCTCACCTGCGACAACCGCAAGTACAGCGACGAGAAGAGCCCGGCCGGCAAG
ACCGACTATCACACGATGGGCGCGTGCTACGACGTGCTCGCGACCCTTGCGCGCGCGGCGCGCAGCGAGCCGACGCAATG
A

Upstream 100 bases:

>100_bases
CCGAGCGCACCGAGATCTCCCTGCCCGTCGAGCTGATCGTGCGGGCCAGCAGCCAGCCCGCCGGCTCACCGGCACTCGAT
ACCGCCACGGTCACCGAATC

Downstream 100 bases:

>100_bases
GCGGCGGCACGTTTCCGGCATTCGTGTCGGCGGGCGACATCCTGACCGACATGGTGCGCGCGGGCGACGCGCAGTGGACC
TCGGTGCCGGGCGGCGCCGG

Product: N-acylglucosamine 2-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNMPPVQSRTATPANHAQAAPFVASFRDPSFLLSHIEDTLRFYATNAFDPTGGFYHYFRDDGSVYNRTSRHLVSSCRFVF
NYAMAYRHFGDPRHLEYARHGLRFLRDAHWDDDLQGYDWELDWRDGAKRETLDATRHCYGLAFVLLAAAHATMAGIDEAR
ALIASTFELAEHRFWDAAAGLYADDATPNWNVSTYRGQNANMHMTEALLAAYEATGHVTYLDRAEKLATHITQRQAALSG
GLVWEHYHADWSVDWDYNKEDSSNIFRPWGFQPGHQTEWAKLLLILERHRPLDWLVPRAAELFDAALTHAWDADHGGLCY
GFGPDFTICDHNKYFWVQAETFAAAAMLGARTGSERFWDWYDEIWRYSWAHFVDHRYGAWYRILTCDNRKYSDEKSPAGK
TDYHTMGACYDVLATLARAARSEPTQ

Sequences:

>Translated_426_residues
MNMPPVQSRTATPANHAQAAPFVASFRDPSFLLSHIEDTLRFYATNAFDPTGGFYHYFRDDGSVYNRTSRHLVSSCRFVF
NYAMAYRHFGDPRHLEYARHGLRFLRDAHWDDDLQGYDWELDWRDGAKRETLDATRHCYGLAFVLLAAAHATMAGIDEAR
ALIASTFELAEHRFWDAAAGLYADDATPNWNVSTYRGQNANMHMTEALLAAYEATGHVTYLDRAEKLATHITQRQAALSG
GLVWEHYHADWSVDWDYNKEDSSNIFRPWGFQPGHQTEWAKLLLILERHRPLDWLVPRAAELFDAALTHAWDADHGGLCY
GFGPDFTICDHNKYFWVQAETFAAAAMLGARTGSERFWDWYDEIWRYSWAHFVDHRYGAWYRILTCDNRKYSDEKSPAGK
TDYHTMGACYDVLATLARAARSEPTQ
>Mature_426_residues
MNMPPVQSRTATPANHAQAAPFVASFRDPSFLLSHIEDTLRFYATNAFDPTGGFYHYFRDDGSVYNRTSRHLVSSCRFVF
NYAMAYRHFGDPRHLEYARHGLRFLRDAHWDDDLQGYDWELDWRDGAKRETLDATRHCYGLAFVLLAAAHATMAGIDEAR
ALIASTFELAEHRFWDAAAGLYADDATPNWNVSTYRGQNANMHMTEALLAAYEATGHVTYLDRAEKLATHITQRQAALSG
GLVWEHYHADWSVDWDYNKEDSSNIFRPWGFQPGHQTEWAKLLLILERHRPLDWLVPRAAELFDAALTHAWDADHGGLCY
GFGPDFTICDHNKYFWVQAETFAAAAMLGARTGSERFWDWYDEIWRYSWAHFVDHRYGAWYRILTCDNRKYSDEKSPAGK
TDYHTMGACYDVLATLARAARSEPTQ

Specific function: Unknown

COG id: COG2942

COG function: function code G; N-acyl-D-glucosamine 2-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87082342, Length=389, Percent_Identity=28.5347043701799, Blast_Score=141, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819 [H]

Pfam domain/function: PF07221 GlcNAc_2-epim [H]

EC number: 5.-.-.- [C]

Molecular weight: Translated: 49044; Mature: 49044

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMPPVQSRTATPANHAQAAPFVASFRDPSFLLSHIEDTLRFYATNAFDPTGGFYHYFRD
CCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
DGSVYNRTSRHLVSSCRFVFNYAMAYRHFGDPRHLEYARHGLRFLRDAHWDDDLQGYDWE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE
LDWRDGAKRETLDATRHCYGLAFVLLAAAHATMAGIDEARALIASTFELAEHRFWDAAAG
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LYADDATPNWNVSTYRGQNANMHMTEALLAAYEATGHVTYLDRAEKLATHITQRQAALSG
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHC
GLVWEHYHADWSVDWDYNKEDSSNIFRPWGFQPGHQTEWAKLLLILERHRPLDWLVPRAA
CEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
ELFDAALTHAWDADHGGLCYGFGPDFTICDHNKYFWVQAETFAAAAMLGARTGSERFWDW
HHHHHHHHHCCCCCCCCEEEECCCCEEEEECCEEEEEEHHHHHHHHHHHCCCCCHHHHHH
YDEIWRYSWAHFVDHRYGAWYRILTCDNRKYSDEKSPAGKTDYHTMGACYDVLATLARAA
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RSEPTQ
CCCCCC
>Mature Secondary Structure
MNMPPVQSRTATPANHAQAAPFVASFRDPSFLLSHIEDTLRFYATNAFDPTGGFYHYFRD
CCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
DGSVYNRTSRHLVSSCRFVFNYAMAYRHFGDPRHLEYARHGLRFLRDAHWDDDLQGYDWE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE
LDWRDGAKRETLDATRHCYGLAFVLLAAAHATMAGIDEARALIASTFELAEHRFWDAAAG
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LYADDATPNWNVSTYRGQNANMHMTEALLAAYEATGHVTYLDRAEKLATHITQRQAALSG
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHC
GLVWEHYHADWSVDWDYNKEDSSNIFRPWGFQPGHQTEWAKLLLILERHRPLDWLVPRAA
CEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
ELFDAALTHAWDADHGGLCYGFGPDFTICDHNKYFWVQAETFAAAAMLGARTGSERFWDW
HHHHHHHHHCCCCCCCCEEEECCCCEEEEECCEEEEEEHHHHHHHHHHHCCCCCHHHHHH
YDEIWRYSWAHFVDHRYGAWYRILTCDNRKYSDEKSPAGKTDYHTMGACYDVLATLARAA
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RSEPTQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]